Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_019915.1 Length=40917 Score E Sequences producing significant alignments: (Bits) Value seq1616 107 5e-19 >seq1616 Length=186323 Score = 107 bits (118), Expect = 5e-19 Identities = 252/370 (68%), Gaps = 8/370 (2%) Strand=Plus/Minus Query 16079 TTTTTATTCGATAGGGAACCAGCAGAAGGCAGACAGATATTTTGTGCAGCTAATGACAAG 16138 |||||||| | || | || ||| | | || || ||||||||| | |||||||| || Sbjct 184584 TTTTTATTTGCTAAAAATCCCGCATTAAGTAGGCAAATATTTTGTACTGCTAATGATAAA 184525 Query 16139 AAACAAGCAAGCGTAGTATTCAACATGGTAACTAAACAACTT-ATGCATTTAGTATCAAA 16197 |||||||| || | | ||| |||||| || || ||| | |||| || || ||| || Sbjct 184524 AAACAAGCGAGTATTGCATTTGACATGGCAAGGAAGCAATTAGATGCTTTAAG-ATCTAA 184466 Query 16198 AGTACCAGA-ATTAAAGAAAGACGTTAAAAAAGTACGCGAGTTGCTTAATAACTTGCGTG 16256 | || || |||| | |||| |||| || || ||||| ||||| || | | | Sbjct 184465 ATATCCTGATATTAGA-AAAGCAACTAAACGTGTTCGAGAGTTTCTTAAAAATCTAAGAG 184407 Query 16257 ATGACTCTTTCGTTA-TGCCATTATCACGTGATACAAGTGCAGTCGATGGTTTCGAACCA 16315 |||| || | | ||| || || || || ||| ||||| | ||||| || || || Sbjct 184406 ATGAATCATACATTACTGTTCTT-TCTAAAGAAACAGGTGCAATTGATGGATTTGAGCCT 184348 Query 16316 TTCCTAGCTGTTATTGATGAATACCATGCAGCGAAAACAGATGAAATGGTCGAATTAATC 16375 | | | || ||||||| || ||| | ||||||||||||||| | ||||| || Sbjct 184347 TATATTGGAGTGTTTGATGAGTATGGAGCATCAAAAACAGATGAAATGATGGAATTGATT 184288 Query 16376 CAATCAGGTCAAGGTAACTTATACCAATCACTT-ATATTTATCATCAGTACCGCAGGTTT 16434 ||||||||||||| | ||| | |||| || || || || || |||||| ||| Sbjct 184287 GAATCAGGTCAAGGACAATTAGA-TAATCCGTTAATTTTAATTATTTCTACCGCCAATTT 184229 Query 16435 TAACTTAAAT 16444 ||| |||||| Sbjct 184228 TAATTTAAAT 184219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130564125194232