Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq1616 149 6e-31 >seq1616 Length=186323 Score = 149 bits (164), Expect = 6e-31 Identities = 210/289 (73%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 38720 TGTGTTCCTGTGTCAAGCCAAGTAAATCCTCGTCCGAGAACTTCCACTTGTAACTT--CC 38777 || || ||||| || | ||||| ||| || ||||| | || || || | || || || Sbjct 91536 TGCGTGCCTGTATCTAACCAAGCAAAACCACGTCCCATAATCTCTACA-GAAAGTTTTCC 91594 Query 38778 TGTCTTCTAGGTA-GCTGCGATTGATATCAGTGATCTCCAGTTCTCCACGCGCGGAAGGG 38836 | | ||||| || ||| | |||| ||||||||||| ||||| |||||| | || || Sbjct 91595 TCT-TTCTAAATATGCTTTG-TTGACGTCAGTGATCTCTAGTTCGCCACGCTCAGATGGT 91652 Query 38837 GTTACTTCTAATGCACGTTGAATAACAGAGTTATCATAGAAATACAAACCTGTGACAGCA 38896 | | |||| |||| | ||| ||| ||| || |||||||| | |||||||||||| Sbjct 91653 TTGATTTCTTTTGCAATTGAAATCACATCGTTGTCGTAGAAATAAAGTCCTGTGACAGCA 91712 Query 38897 TAATCTGATTTAGGATTTTCAGGTTTCTCTTCAATAGAAATAGCTTGACGATTACTCCCA 38956 |||| |||||| || | | ||||||||||||||||| | |||||| ||| || Sbjct 91713 TAATTTGATTTTGGTTCTGTTGGTTTCTCTTCAATAGAGAGAGCTTGCATATTTTCATCA 91772 Query 38957 AATTCAACCACACCGAATCGTTCAGGATCTTTCACCAAATACCCGAAAA 39005 ||||| |||||||| || ||||| ||||| || || ||| ||||||| Sbjct 91773 AATTCGACCACACCAAAACGTTCCGGATCATTAACATGATATCCGAAAA 91821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471684642938080