Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_020197.1 Length=45606 Score E Sequences producing significant alignments: (Bits) Value seq1464 174 5e-39 seq1539 158 4e-34 seq3145 120 9e-23 seq28223 89.7 1e-13 >seq1464 Length=66918 Score = 174 bits (192), Expect = 5e-39 Identities = 231/321 (72%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 8262 TGATCAATAACGTAGTATTAGTTGGACGTCTAACTAAAGACCCAGAATTAAAACATACCG 8321 |||| |||||||| ||| ||||||||||||| || ||||| ||||| ||| | |||| Sbjct 17855 TGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACAT 17914 Query 8322 GAAACAACATCGCTGTAGCATCTTTCAGTCTTTCGGTTAACCGTCATTTCAAAAATGATA 8381 || || ||||||||| | |||| | | | || || ||| | |||| | | | Sbjct 17915 CAAGTGGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAAA 17974 Query 8382 ACGGAGAGCGTGAAACTGACTTTATCAATTGCGTTATCTGGAGACAGCAAGCTGAAAACT 8441 |||| | ||||| | || ||||| ||||| || || ||| || | ||| |||| Sbjct 17975 ACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACAC 18034 Query 8442 TGGCTAACTGGGCTAAAAAAGGTGCATTGATTGGCATTACTGGACGTATTCAGACTCGTA 8501 | || |||| || | ||||| | | | || | ||||| |||||||| || ||| Sbjct 18035 TAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGTT 18094 Query 8502 GCTATGAAAATCAGCAAGGTCAACGTGTTTACGTGACTGAAGTTGTCGCTGAAAACTTCC 8561 ||||| ||||| ||||| |||||||| ||||| || ||||| || ||||||||||||| Sbjct 18095 CTTATGATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTCC 18154 Query 8562 AGATGTTGGAAAGTCGTGCAG 8582 | | |||||||||||||||| Sbjct 18155 AATTATTGGAAAGTCGTGCAG 18175 >seq1539 Length=57711 Score = 158 bits (174), Expect = 4e-34 Identities = 231/327 (71%), Gaps = 0/327 (0%) Strand=Plus/Minus Query 8249 GGAGaaaaaaaCATGATCAATAACGTAGTATTAGTTGGACGTCTAACTAAAGACCCAGAA 8308 ||||| | ||| ||||||||||| ||| ||||| ||||| |||| ||||| || || Sbjct 16185 GGAGAGATAAAAATGATCAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCCCGAT 16126 Query 8309 TTAAAACATACCGGAAACAACATCGCTGTAGCATCTTTCAGTCTTTCGGTTAACCGTCAT 8368 ||| |||||| || || || || || |||| | | | ||||| || || Sbjct 16125 TTACGTTATACCGCAAGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAAT 16066 Query 8369 TTCAAAAATGATAACGGAGAGCGTGAAACTGACTTTATCAATTGCGTTATCTGGAGACAG 8428 || | ||| | ||||| | || ||| |||| ||||||||||| || || ||| | | Sbjct 16065 TTTACGAATCAAAACGGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAA 16006 Query 8429 CAAGCTGAAAACTTGGCTAACTGGGCTAAAAAAGGTGCATTGATTGGCATTACTGGACGT 8488 | ||| |||| |||||| | |||||||| ||| || || ||| | ||||| Sbjct 16005 CCAGCGGAAACGATGGCTACATTAGCTAAAAAGGGTAGTTTAATCGGCGTCGTCGGACGG 15946 Query 8489 ATTCAGACTCGTAGCTATGAAAATCAGCAAGGTCAACGTGTTTACGTGACTGAAGTTGTC 8548 ||||| || || | ||||| || |||||||| || ||||| ||||||||||||||||| Sbjct 15945 ATTCAAACGCGGACTTATGACAACCAGCAAGGACAGCGTGTCTACGTGACTGAAGTTGTG 15886 Query 8549 GCTGAAAACTTCCAGATGTTGGAAAGT 8575 || || || ||||| | || |||||| Sbjct 15885 GCCGATAATTTCCAACTATTAGAAAGT 15859 >seq3145 Length=45091 Score = 120 bits (132), Expect = 9e-23 Identities = 223/326 (68%), Gaps = 6/326 (2%) Strand=Plus/Plus Query 8250 GAGaaaaaaaCATGATCAATAACGTAGTATTAGTTGGACGTCTAACTAAAGACCCAGAAT 8309 ||| |||||| ||||| || || || ||||| |||||| |||| |||||||| || | Sbjct 1783 GAGGAAAAAATATGATTAACAATGTGACTTTAGTAGGACGTTTAACGAAAGACCCTGATT 1842 Query 8310 TAAAACATAC---CGGAAACAACATCGCTGTAGCATCTTTCAGTCTTTCGGTTAACCGTC 8366 | |||| ||| || | ||| || | || | ||| | ||||| || Sbjct 1843 TGCGCTATACGAGCGGTGGAAAA---GGTGTGGCTACATTTACCCTTGCAGTTAATCGAA 1899 Query 8367 ATTTCAAAAATGATAACGGAGAGCGTGAAACTGACTTTATCAATTGCGTTATCTGGAGAC 8426 | || | ||| | ||||||||||||| | ||||| | | || || || ||||| Sbjct 1900 ACTTTACCAATCAAGCCGGAGAGCGTGAAGCAGACTTCGTTCAATGTGTGATTTGGAGGA 1959 Query 8427 AGCAAGCTGAAAACTTGGCTAACTGGGCTAAAAAAGGTGCATTGATTGGCATTACTGGAC 8486 | | ||| |||| ||||||| | ||| | || | ||| | ||| | || |||| Sbjct 1960 AACCAGCGGAAACACTGGCTAATTATGCTCGCAGGGGAACCTTGCTAGGCGTGACCGGAC 2019 Query 8487 GTATTCAGACTCGTAGCTATGAAAATCAGCAAGGTCAACGTGTTTACGTGACTGAAGTTG 8546 | ||||| || ||| ||||| ||||||||||| ||||||||||| || || ||||||| Sbjct 2020 GAATTCAAACACGTTCTTATGACAATCAGCAAGGGCAACGTGTTTATGTAACGGAAGTTG 2079 Query 8547 TCGCTGAAAACTTCCAGATGTTGGAA 8572 | || || || || || |||||||| Sbjct 2080 TAGCAGAGAATTTTCAATTGTTGGAA 2105 >seq28223 Length=7146 Score = 89.7 bits (98), Expect = 1e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 4631 TGTCTGATAATCAAAAATACTATTATATGAGGCTCAAACAAGACTTCTTTGAGACGGAAG 4690 || ||||||| | |||||| ||| | | || ||| | | || ||||| | || | Sbjct 188 TGGCTGATAACAAGCGATACTACTATTTAAAACTAAAAGAGAATTTTTTTGATAGTGACG 247 Query 4691 AAATGATAATACTTGAGTCTATGCAAGACGGCTATTTGTATAGCAACATCTTGTTGAAAC 4750 ||||||| | ||||| ||||| ||| |||||| | ||| ||||| | | |||| Sbjct 248 AAATGATTCTTCTTGAAAGTATGCCAGATGGCTATATATATTCTAACATTCTCCTCAAAC 307 Query 4751 TATATTTGAGAAGTTTAAAGCGTGACGGTAAATTGATGTTTAACGACACAATCCCAT 4807 | ||||| ||||| | |||| ||| || || ||||||||||| |||| ||| |||| Sbjct 308 TCTATTTACGAAGTCTGAAGCATGAAGGCAAGTTGATGTTTAATGACAGAATTCCAT 364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145540401106944