Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq11297 185 4e-42
>seq11297
Length=12984
Score = 185 bits (204), Expect = 4e-42
Identities = 273/384 (71%), Gaps = 2/384 (1%)
Strand=Plus/Minus
Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981
|| ||| | | |||||| | |||||| ||||| | |||||||| | ||||| ||||||
Sbjct 11514 TCTACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTC 11455
Query 25982 ATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040
|||||||| || || ||| ||||| |||| ||| ||||| ||||| ||||| | |||||
Sbjct 11454 ATTTCTTCCTTACCTGTG-TTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCA 11396
Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100
|| |||||||| || ||||| || | ||| ||||||||||||||| |||||
Sbjct 11395 AGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCT 11336
Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCT 26160
|| || | || | ||| |||||||||| |||| ||| |||| | || || ||||
Sbjct 11335 GGCGGTATTGTTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCC 11276
Query 26161 ATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCA 26220
| || | || || | ||| || || | ||| | ||| || |||||||| |
Sbjct 11275 AGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGA 11216
Query 26221 TTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTT 26280
||| ||||| |||||| | | | ||||| ||||| |||| ||||||||| ||||
Sbjct 11215 TTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCATCTTT 11156
Query 26281 CATTCCTAATAAAAAACAAGAAGA 26304
||| ||| | ||||| || ||
Sbjct 11155 CATAGCTATAAGGAAACAGGAGGA 11132
Score = 122 bits (134), Expect = 4e-23
Identities = 352/529 (67%), Gaps = 16/529 (3%)
Strand=Plus/Minus
Query 24645 CGATATTTT--CTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTC-TAA 24701
|| |||||| |||| |||| ||||| || |||| | |||||||||| || | |||
Sbjct 12757 CGTTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAA 12698
Query 24702 GATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTT 24761
| || |||||||| ||||| ||| | | |||||| ||| ||||| || || || ||||
Sbjct 12697 G-TAGTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTT 12639
Query 24762 TTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTT 24821
|| || ||| | | | | | | ||| | |||||| ||| | |||| |
Sbjct 12638 TTCCATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGATCTATAAAAGCTC 12579
Query 24822 GTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATC 24881
|||||| || || | | ||| ||||||| || || || | | ||||||||
Sbjct 12578 CTCTATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACA 12519
Query 24882 TCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATT-TTCTCTC-AA 24939
||| |||| || | ||||| || |||| | ||| | |||||||| || | | ||
Sbjct 12518 AATCTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAA 12459
Query 24940 TA-GATTCAATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCAAG 24997
|| |||| | |||||| ||| | || | |||| ||| | | |
Sbjct 12458 TAAGATT---TTTCATATCTTCATCCCACAAATCAGCCCGAGTCAA-ATCAGTCAGAAGA 12403
Query 24998 TGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGAAG 25055
|| | || | | | |||||||||||| || |||||||| ||| ||| ||||| |
Sbjct 12402 TGATGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCT--TTGGTAAATATTTGATG 12345
Query 25056 TGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTA 25115
| || ||||||||| ||||| | || || | ||||| | |||||| || || |||||
Sbjct 12344 TAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAG 12285
Query 25116 ATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTT 25164
||||| ||||| ||||| | |||||||| ||| | |||| || |||
Sbjct 12284 GAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTT 12236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252546312950300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |