Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq11297 187 3e-42 >seq11297 Length=12984 Score = 187 bits (206), Expect = 3e-42 Identities = 484/729 (66%), Gaps = 24/729 (3%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 |||||| | ||| | || | || ||||||||| |||||||| ||| | || |||||| Sbjct 11654 TGGAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGAT 11713 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 |||||||||| |||||||| ||||| ||| | || || || || | ||||||||| Sbjct 11714 GCTTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 11773 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || || || | | ||||| | ||||| ||| || ||||| | || || || Sbjct 11774 ACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATA 11833 Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAA 76117 || ||| | || ||| |||| | | || ||| ||| | ||||| | | ||| Sbjct 11834 GCACTTAACATGTTTGT---TGAA---AATAACAGATTTAATTTTAAAAAATTAAAAGAA 11887 Query 76118 ATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT- 76176 |||||||||||||| || ||||| ||||| ||| ||||| ||||||||||| || Sbjct 11888 ATCACAAAGATTGTAACTCAAAATTTAAACAAAGTTATTGATGTTAATTTTTATCCTGTC 11947 Query 76177 --TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGT 76234 ||| || || || |||||| |||| |||||||||||| | |||||||| || Sbjct 11948 CCTGA---AGCAAAAACTTCAAATATGAGACATAGACCTATTGGTATTGGTGTTCAGGGC 12004 Query 76235 CTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293 | || |||| ||| | ||| || || | | || || |||| | | Sbjct 12005 ATGGCAGATGCGTTTGTGTTGATGAGAATA-TCTTACGAAAGTGAGAAAGCAATACTTCT 12063 Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353 ||| | || |||||||| || ||| | | | | || || ||||||||||| || Sbjct 12064 CAATCAACAAATATTTGAAACAATTTATTATGGTGCATTAGAAGCTAGTTGTGAATTAGC 12123 Query 76354 TGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCA 76413 |||| ||||| | || |||| | | || ||| || |||||| | || || Sbjct 12124 TGAAAAAGAAGGTGCGTACAGTACATATCAAGGGAGTCCAGCAAGCCAAGGTATCCTCCA 12183 Query 76414 GTTTGATATGTGGG---AAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGA 76470 || ||||||||||| || | || | || | ||||||| ||| || || || Sbjct 12184 GTATGATATGTGGGACAAAACTCCTACAGACCT---TTGGGACTGGGCTGTCCTTAAAGA 12240 Query 76471 ACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 76528 | || ||| | | ||| | || || ||| ||||| || || ||||| || ||| Sbjct 12241 AAAGATAGCAA--AACATGGTTTGCGCAATTCTCTATTGATAGCTCCTATGCCGACTGCC 12298 Query 76529 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 || || |||||||| | || || | ||||| |||||||| | ||| |||| || ||| Sbjct 12299 TCTACTGCACAAATTCTTGGCAACACTGAATCTTTTGAACCCTTTACATCAAATATTTAC 12358 Query 76589 CTGAGAAGA 76597 | |||||| Sbjct 12359 CAAAGAAGA 12367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595375834401920