Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_020883.1 Length=50861 Score E Sequences producing significant alignments: (Bits) Value seq1464 98.7 3e-16 >seq1464 Length=66918 Score = 98.7 bits (108), Expect = 3e-16 Identities = 197/292 (67%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 11742 AGTTGGAAGATTGACAAGAGACCCGGAATTGAAATACACGCCTAACGGCGCTGCGGTTGC 11801 ||||||| | |||||| ||| || || || ||| || | | ||| |||| || || Sbjct 17874 AGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACATCAAGTGGCACTGCTGTAGC 17933 Query 11802 TACTTTTACAATAGCGATCAACAGAACATTCACGAATCAAAGCGGAGAACGTGAAGCGGA 11861 || || || |||| |||| | | ||||||| |||| ||| | ||||| ||||| Sbjct 17934 AACGTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAAAACGGCAACCGTGAGGCGGA 17993 Query 11862 CTTTATTAATTGTGTCGCATGGAGAAAACAAGCTGAAAACGTTGCAAACTTTCTGAAAAA 11921 |||||||||||||| ||| ||||| ||| |||| | ||||||| | | || Sbjct 17994 TTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACACTAGCAAACTATGCACATAA 18053 Query 11922 AGGATCGCTCGCAGGGGTAGATGGAAAATTGCAGACGCGGAGTTATGAGAATCAGCACGG 11981 |||| | || ||| ||| ||| | || ||||| |||||| ||||| || || Sbjct 18054 AGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGTTCTTATGATAATCAACAAGG 18113 Query 11982 GCAACGGGTATTTGTTACTGAAGTACAGGCGGATAGCGTTCAATTCTTAGAA 12033 ||||| || | || || |||||| || || | | | ||||| || ||| Sbjct 18114 ACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTCCAATTATTGGAA 18165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162324433932984