Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq48995 170 3e-37 seq16183 161 2e-34 seq32113 154 3e-32 seq1641 131 3e-25 seq27907 89.7 9e-13 >seq48995 Length=1108 Score = 170 bits (188), Expect = 3e-37 Identities = 180/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||||| |||||||| | ||| || |||| || || ||| || Sbjct 456 AATTTGCATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTT 397 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || || || | ||| || | ||||||||| || ||||| | |||||||| Sbjct 396 GTAGTCTGACAATGTGCGCCCATCTTCAAGTTGTTTTCCAGCGAAAATGAGCCTCTGTTG 337 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || || || || |||||||| ||||| | ||| | |||| ||| || || || Sbjct 336 GTCTGGGGGAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGA 277 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||||||| ||||| ||||||||||| || || ||||||||||| |||||||| Sbjct 276 AGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGAGTTTTTACAAAAATTTGCAT 220 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||| | || || || | ||||| |||| ||||| |||||| Sbjct 228 AATTTGCATCCCACCTCTTAGACGCAGAACTAAGTGCAAAGTAGATTCTTTTTGAATATT 169 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | || | ||| |||| ||||| || || ||||| | |||||||| Sbjct 168 ATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTG 109 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || ||||| || ||||| ||||| | || | |||| || ||||| || Sbjct 108 GTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGA 49 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 || || ||||| | ||| |||||||| || || || || |||||||| Sbjct 48 AGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAA 1 >seq16183 Length=3749 Score = 161 bits (178), Expect = 2e-34 Identities = 178/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || |||||||||| || |||||||||||||| |||| || || |||||| Sbjct 388 ATTTGCATTCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTG 447 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| |||| || | ||| || | || ||||| |||||||| | ||| || ||| Sbjct 448 TAGTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGA 507 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || |||||||| || ||||| | || | |||| ||| ||||| ||| Sbjct 508 TCTGGGGGAATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAA 567 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || ||||| | || |||||||| || || || ||||||||||||||||||||| Sbjct 568 GCTTCCACTTCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 624 Score = 154 bits (170), Expect = 3e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||||| |||||||| | ||| || |||| || || |||||| Sbjct 159 AATTTGCATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATT 218 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| || | || ||||| |||||||| | || ||||| Sbjct 219 GTAGTCAGACAGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTG 278 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| |||||||| |||||||| ||||||| || | |||| || || || || Sbjct 279 GTCTGGAGGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGA 338 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | ||||||||| || || ||||| || || || || || |||||||||||||||||| Sbjct 339 GGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 396 Score = 123 bits (136), Expect = 4e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 193158 TGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGT 193217 ||||| |||| || || ||||||||||| || | ||| | ||| || | ||| Sbjct 877 TGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGCGTGCGCCCATCTTCCAGTTGC 936 Query 193218 TTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTG 193277 |||||||| ||||| | ||| |||||||| ||||| || ||||| || |||||||| || Sbjct 937 TTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGTATCTTT 996 Query 193278 GTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTT 193337 | |||| ||| || ||||| |||| || ||||| | || || ||||| || ||| Sbjct 997 GCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTT 1056 Query 193338 AGCGTTTTTACAAATATTTGCAT 193360 | |||||||| || |||||||| Sbjct 1057 AAAGTTTTTACGAAGATTTGCAT 1079 Score = 111 bits (122), Expect = 3e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||||||||| || ||||| | ||| ||||||||||| || || |||||||| Sbjct 12 ATCTTCCAGTTGTTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGGGGAATGCCTTCTTT 71 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 || || || || | || | |||| || || || |||| || ||||||| || || Sbjct 72 GTCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAAT 131 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||| || || || ||||| ||||| |||||||| Sbjct 132 AGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 167 >seq32113 Length=13445 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||||| || | |||| ||||| |||||||||||| || | || | || || Sbjct 7581 TACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCTTC 7640 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 ||||| ||||| || ||||| || | |||||||| ||||| || ||||| || ||||| Sbjct 7641 CAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTG 7700 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330 ||||||| ||||| |||| |||||||||||||| |||||||| | ||| || ||||| Sbjct 7701 AATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTT 7760 Query 193331 ACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||| || || ||||| ||||| || |||||||| Sbjct 7761 ACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7793 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||| || || ||||| | ||| | |||| |||||| || || Sbjct 6871 ATTTGCATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTG 6930 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | || | | ||| |||| || || || ||||| || | | |||||| Sbjct 6931 TAGTCAGACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGA 6990 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || ||||||||||| || || | |||| |||| ||| || || || Sbjct 6991 TCTGGGGGAATACCCTCTTTATCTTGAATCTTTGCCTTTACATTTTCAATGGTGTCAGAT 7050 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || || ||||||||||| || |||||||| || || |||||||||||||| Sbjct 7051 GGCTCCACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 7106 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| |||| | || ||||||| || | || | |||||| ||||| ||||| Sbjct 6421 ATACCTCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCA 6480 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | ||| || || || || || | | |||||||| ||| Sbjct 6481 GACAGGGTGCGGCCATCTTCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGA 6540 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| |||||||| || || | ||| | |||| ||| || || || | |||| Sbjct 6541 GGAATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCA 6600 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||||| |||||| ||||| || || || ||||| ||||||||||||||| Sbjct 6601 ACTTCTAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 6651 Score = 122 bits (134), Expect = 2e-22 Identities = 169/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| || | | || | ||| | ||| | |||| || || ||||||| Sbjct 7327 ATTTGCATACCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTA 7386 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || ||||| || | ||| || | ||||||||| |||||||| | ||||||||| Sbjct 7387 TAATCAGATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGA 7446 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || ||||| ||||| || || | || | |||| ||||| ||||| Sbjct 7447 TCTGGGGGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGAC 7506 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || || |||| ||| || ||||| ||||| || || || ||||| || |||||| Sbjct 7507 GGTTCTACCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 7563 Score = 120 bits (132), Expect = 5e-22 Identities = 168/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| | | ||||| || | |||| || | |||||| |||||| Sbjct 6643 ATTTGCATTCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTG 6702 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || || || | | ||| || ||||| ||||| |||||||| | | |||||| Sbjct 6703 TAATCAGACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGGCGCTGTTGG 6762 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || || |||||||||||||| | ||| | ||| ||| || || || Sbjct 6763 TCTGGGGGGATGCCCTCCTTATCTTGTATTTTAGCTTTGACATTCTCAATTGTGTCAGAT 6822 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| || || || || || || || | ||||| |||||||||||||| Sbjct 6823 GGTTCTACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 6878 >seq1641 Length=3631 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191 |||| || | | |||||| || ||||||||||| | || || ||| || ||||| | Sbjct 2386 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAG 2327 Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251 | || || | ||| |||| |||||| || ||||| || || | || || || || | Sbjct 2326 ACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTG 2267 Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 | || ||||| |||||||| ||||| | ||||| |||| |||||||| || | ||| | Sbjct 2266 GAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCGA 2207 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || || || || |||||||| || || || || || || ||||||||| Sbjct 2206 CCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 2157 >seq27907 Length=8790 Score = 89.7 bits (98), Expect = 9e-13 Identities = 82/100 (82%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 263799 GGTCCGTAGCTACTATGTAAGCCGGTGCTGACGAGGAACCGGTCTAACTCCTTGTCATCA 263858 |||||||||||||| |||| |||||| || | ||| |||| ||| ||| || || || Sbjct 938 GGTCCGTAGCTACTGAGTAAACCGGTGATGGCAGGGAGCCGGCCTACTTCCCTGCCAACA 879 Query 263859 GATATGTTGAAGCG-TAT-AAGCAATCATATAATGGTAAT 263896 |||||||||||||| ||| |||||||||||| ||||||| Sbjct 878 GATATGTTGAAGCGTTATAAAGCAATCATAT-GTGGTAAT 840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897854146562880