Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq16183 145 1e-29
seq32113 136 6e-27
seq95541 127 3e-24
seq48995 95.1 2e-14
seq7617 91.5 2e-13
>seq16183
Length=3749
Score = 145 bits (160), Expect = 1e-29
Identities = 142/183 (78%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | |||||| ||||||| |||||||| ||||| ||||| |||| |||
Sbjct 624 AATGCAAATATTTGTAAAAACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 565
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| ||| || || ||||| || |||||||| ||||| || ||||| ||
Sbjct 564 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 505
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||| | |||| ||| || |||||||| |||||| | || |||| || || ||
Sbjct 504 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACAA 445
Query 156002 TAT 156004
|||
Sbjct 444 TAT 442
Score = 120 bits (132), Expect = 4e-22
Identities = 120/156 (77%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | |||||| ||||||| ||||||||||| |||||||| |||| ||||
Sbjct 167 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 108
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||| || || || || || || ||||||||||| || || || |||
Sbjct 107 GACACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCCCCTGATCAA 48
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
|||||| |||||| || || || || || ||||||
Sbjct 47 CAAAGACTGATTTTCGCTGGAAAACAACTGGAAGAT 12
Score = 118 bits (130), Expect = 2e-21
Identities = 136/183 (74%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | || ||||||||||| || ||||| || || ||||| || |||
Sbjct 852 AATGCAAATTTTCGTAAAGACATTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 793
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| ||| || ||| ||||| || |||||||| || || || ||||| ||
Sbjct 792 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 733
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||| | |||| ||| || |||||||| |||||| | || |||| ||||| ||
Sbjct 732 GCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACAA 673
Query 156002 TAT 156004
||
Sbjct 672 CAT 670
Score = 113 bits (124), Expect = 7e-20
Identities = 119/157 (76%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | || ||| ||||||| || ||||| ||| | ||||| || ||
Sbjct 396 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 337
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | || ||| || || ||||| |||||||| ||||| || |||||||| ||
Sbjct 336 TGACACAATCGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCTCCAGACCA 277
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
|||||| | |||| ||| || |||||||| ||||||
Sbjct 276 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGAT 240
>seq32113
Length=13445
Score = 136 bits (150), Expect = 6e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | ||||||||||||||||| || ||||| | ||||| ||| |||
Sbjct 6878 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 6819
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || ||| ||||||||||||||| || ||||| || ||||| |||
Sbjct 6818 GACACAATTGAGAATGTCAAAGCTAAAATACAAGATAAGGAGGGCATCCCCCCAGACCAA 6759
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | | |||| ||| || ||||| | |||||| | ||||| || ||||| |||
Sbjct 6758 CAGCGCCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 6699
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032
|| |||||| | || || || ||||||
Sbjct 6698 ATTCAGAAAGAGTCAACCCTGCACTTAGTG 6669
Score = 127 bits (140), Expect = 3e-24
Identities = 156/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| |||||||| | ||||||||||| ||||| |||||||| |||| ||||
Sbjct 7334 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 7275
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| |||||| |||||| ||||| ||||| ||||| || || || ||
Sbjct 7274 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 7215
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | | || | ||| |||||||| | |||||| | || | || || || |
Sbjct 7214 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACA-- 7157
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGT 156031
| ||||||| ||| | || |||||| ||||
Sbjct 7156 ACATCCAAAAGGAGTCTACCCTTCATCTAGT 7126
Score = 122 bits (134), Expect = 1e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | |||||| | ||||||||||| || || |||||||| || ||
Sbjct 6651 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTAGAAGTTGAGCCATC 6592
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| ||| || ||| ||| || |||||||| ||||| || |||||||| ||
Sbjct 6591 AGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 6532
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||| | | || | || |||||||| || |||||| | | || | || || || ||
Sbjct 6531 ACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 6472
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031
||| |||||| | || ||||| || ||
Sbjct 6471 TATCCAGAAAGAGTCCACCCTTCACTTGGT 6442
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || ||| |||| || |||||||||||||||||||| ||| ||
Sbjct 6422 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATTACATTAGAAGTTGAACCCTCA 6363
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||| || ||| || || ||||| ||||| || || || ||||| |||
Sbjct 6362 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 6303
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | |||| || || |||||||| || ||| | | ||| | || || || |||
Sbjct 6302 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTACAAT 6243
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| |||||| | || | || || || ||| | ||| |||| |||
Sbjct 6242 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGGT 6195
Score = 113 bits (124), Expect = 7e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||| || ||| |||| || | || |||||||| || || ||||| || ||| ||
Sbjct 7563 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTC 7504
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| ||| ||||| || || ||||| ||||| || || || ||||| ||
Sbjct 7503 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 7444
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| || |||||| ||| || || || || |||||| | | || ||||| ||||||||
Sbjct 7443 ACAGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 7384
Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTT 156034
||| || ||| || | || || |||||||| ||
Sbjct 7383 TAT-TCAAAAGGAATCTACCCTACATTTAGTATT 7351
Score = 89.7 bits (98), Expect = 8e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | || ||| | || || || ||||| || | || || || |||
Sbjct 7106 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAGCCATCT 7047
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| || || || || ||||||||||| || || || ||||| |||
Sbjct 7046 GACACCATTGAAAATGTAAAGGCAAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 6987
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | || | ||| || |||||||| |||||| | || | || || || ||
Sbjct 6986 CAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 6927
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031
|| |||||| | || |||||||||||
Sbjct 6926 ATCCAAAAAGAGTCTACCCTTCATTTAGT 6898
>seq95541
Length=3042
Score = 127 bits (140), Expect = 3e-24
Identities = 156/212 (74%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 18410 TTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATG 18469
||| ||||||| || ||||||| ||||| ||||| ||||| ||||| || ||||| |
Sbjct 2355 TTTCCTTTGGA-TCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACA 2413
Query 18470 CTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTA 18529
|||||||||| || ||||||| ||| || | || || || | ||||| |||
Sbjct 2414 TTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGT 2473
Query 18530 TAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAA 18589
| || | || ||||| ||||||||||| ||||| |||| || ||| || ||||| ||
Sbjct 2474 GAGAAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAG 2533
Query 18590 ACATATTTAATGAAATGTTTTTCATTATCCTT 18621
|||| || || |||||||| ||| ||| ||
Sbjct 2534 ACATGCTTGATAAAATGTTTCTCACAATCTTT 2565
>seq48995
Length=1108
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | ||||| | ||||| ||||||||||| | ||||| || ||||
Sbjct 220 ATGCAAATTTTTGTAAAAACTCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 279
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| || ||| ||||| |||||||| || || || || ||||| |||
Sbjct 280 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCAA 339
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | |||| || || || || || |||||| | || || ||||| || ||
Sbjct 340 CAGAGGCTCATTTTCGCTGGAAAACAACTTGAAGATGGGCGCACATTGTCAGACTACAAC 399
Query 156003 AT 156004
||
Sbjct 400 AT 401
>seq7617
Length=2772
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 17869 GTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCAT 17928
||||||||| ||||||||||| ||||| ||||| || |||||||| || || | ||||||
Sbjct 199 GTATTCTCCAACTTTTTTCTCAAAGAAGTTTGTTTTGCCTTCCAACGAGATGAGATTCAT 140
Query 17929 AAAATCAAATGGATT 17943
|||||| ||||||||
Sbjct 139 AAAATCGAATGGATT 125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 730407487534400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |