Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq32113 168 1e-36 seq48995 140 6e-28 seq1641 134 3e-26 seq16183 132 9e-26 seq95541 131 3e-25 >seq32113 Length=13445 Score = 168 bits (186), Expect = 1e-36 Identities = 178/232 (77%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365 ||||| || | ||| || ||||||||||||| |||| | |||| || ||||||||||| Sbjct 7333 ATACCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGA-ATATTATAATC 7391 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||||||||| || |||| |||| |||||| |||||||| || | ||||||||||| || Sbjct 7392 AGATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGG 7451 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || || ||||| ||||| || || || ||||| |||| || |||| ||| Sbjct 7452 GGGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTC 7511 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||| |||| ||| |||||||| || || | || |||| ||| ||||||||| Sbjct 7512 TACCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 7563 Score = 163 bits (180), Expect = 6e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| ||||| | ||||| ||| | |||| ||| || ||| || || ||| Sbjct 7105 ATACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCA 7164 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||||||| |||||||||||||| | | ||| ||||||||| Sbjct 7165 GACAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGT 7224 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| |||||| ||| ||||| || | || || | ||| Sbjct 7225 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCA 7284 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||| ||||| ||||| | |||||||| ||| || ||||| Sbjct 7285 ACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 7334 Score = 163 bits (180), Expect = 6e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| ||||| || || | ||||| ||||| |||||||| ||| Sbjct 7561 ATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCA 7620 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| | || |||||||| || ||||| || || || | |||||||| || Sbjct 7621 GAAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 7680 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| ||||||||| |||| ||| || | ||| Sbjct 7681 GGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 7740 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| | ||||||||||||||| || | |||||| | ||| ||||||||||| Sbjct 7741 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7793 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||| | ||||| || | || | |||||| ||||| |||||| Sbjct 6649 ATTCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCA 6708 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || |||| |||||||| || |||||||| || | | |||||| || || Sbjct 6709 GACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGGCGCTGTTGGTCTGGG 6768 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || ||||||||||||||| ||| ||||| || | || || | |||| Sbjct 6769 GGGATGCCCTCCTTATCTTGTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCT 6828 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || |||||||| || ||||| |||||||| | |||||| ||||| Sbjct 6829 ACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 6878 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | ||||||||| ||||||| ||||| ||| ||||| || Sbjct 5965 ATCCCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCC 6024 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| ||||| ||||||||||| ||||||| | |||||| || || Sbjct 6025 GACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCGAAGATTAGACGCTGTTGGTCTGGG 6084 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| || ||| || ||||| |||| || || | || Sbjct 6085 GGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCC 6144 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||| ||| ||||| || ||||| | || |||| || |||||||| Sbjct 6145 ACCTCTAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 6194 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| ||||| | ||||||||| | |||| |||||| ||| || || ||| Sbjct 6877 ATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCA 6936 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | || || ||||||||||| | | |||||||| || Sbjct 6937 GACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGG 6996 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||||||||| || || |||||||| || | || || | || Sbjct 6997 GGAATACCCTCTTTATCTTGAATCTTTGCCTTTACATTTTCAATGGTGTCAGATGGCTCC 7056 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| || || || || |||| ||| || | |||||| ||||| Sbjct 7057 ACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 7106 >seq48995 Length=1108 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | ||||||||||||||||| || || || || || || Sbjct 449 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCT 390 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || ||||| || |||| || | |||||| ||||| || || | |||||||| || || Sbjct 389 GACAATGTGCGCCCATCTTCAAGTTGTTTTCCAGCGAAAATGAGCCTCTGTTGGTCTGGG 330 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| ||||| ||| ||||| || | || || | || Sbjct 329 GGAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCA 270 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| |||||||| ||||||||||| | ||||| | ||| || ||||| Sbjct 269 ACTTCAAGAGTAATAGTTTTACCAGTAAGAGTTTTTACAAAAATTTGCAT 220 >seq1641 Length=3631 Score = 134 bits (148), Expect = 3e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCA 192366 |||| || | ||| || | || | ||| || || | || ||| || || || || ||| Sbjct 2386 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGA-ATGTTGTAGTCA 2328 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || ||||| ||| |||| || | |||||||||||||||||| || | || || || ||| Sbjct 2327 GACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGT 2268 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| |||||||| |||||| ||||||||| ||||| ||| || | || Sbjct 2267 GGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCG 2208 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || || |||||||||||||| || | || || | || || |||||| Sbjct 2207 ACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 2157 >seq16183 Length=3749 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | ||||||||||||||||| || || ||||| || ||| Sbjct 166 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCA 225 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| ||| |||| || | || || |||||||| || | || ||||| || || Sbjct 226 GACAGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGA 285 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| |||||||| ||||| || ||||| || | || || | || Sbjct 286 GGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCA 345 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| || || || || || ||||| | ||| || | |||||| |||||| Sbjct 346 ACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 396 Score = 104 bits (114), Expect = 5e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 ||||| || |||| |||| |||||| ||||| || || | ||| ||||||||||| || Sbjct 1 AATGTGCGCCCATCTTCCAGTTGTTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGGGGA 60 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || |||||||| || || || || || ||||| || | || || | ||| ||| Sbjct 61 ATGCCTTCTTTGTCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACT 120 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| ||||| ||||| ||||| | |||||| | ||| || ||||| Sbjct 121 TCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 167 >seq95541 Length=3042 Score = 131 bits (144), Expect = 3e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 50106 ATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAAT 50165 ||||||||||| ||||| || ||||| ||| ||||||||| |||||||| ||| || Sbjct 2384 ATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAG 2443 Query 50166 TGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACA 50225 || ||||| | ||||| || |||| || || || || |||||| ||| Sbjct 2444 CACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAGTTCTCATTAACA 2503 Query 50226 ATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCT 50285 ||||||||||| ||||| ||||||||||| || | || ||||||||||| ||| |||| Sbjct 2504 ATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGTTTCTCACAATCT 2563 Query 50286 TTTAAATTTTCCCAA 50300 ||||| | |||||| Sbjct 2564 TTTAATGTCTCCCAA 2578 Score = 107 bits (118), Expect = 4e-18 Identities = 161/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905 |||| |||||||| |||| |||||| || ||||| ||||| ||||| | |||| |||| Sbjct 1445 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTT 1504 Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965 | | |||||||||||| ||||| || | || || ||||| ||||| || ||||| | Sbjct 1505 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAG 1564 Query 49966 CTATTATTCTTGCTCCAAACATTAATTTATCAT-CT-AATATCCAATTTATAGCCCAATC 50023 | ||||| | | |||||| || | || | || ||||| | || ||||| || Sbjct 1565 CAATTATACGTTCTCCAA--ATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 1622 Query 50024 TGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 50068 ||| || || || | | | |||| | |||| || || || ||||| Sbjct 1623 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 1667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982460756453400