Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq32113 163 5e-35
seq48995 140 6e-28
seq1641 131 3e-25
seq16183 129 1e-24
seq95541 125 1e-23
seq7617 86.0 1e-11
>seq32113
Length=13445
Score = 163 bits (180), Expect = 5e-35
Identities = 176/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || ||||| || || | ||||| ||||| ||||||||| ||
Sbjct 7561 ATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCA 7620
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || ||| |||| |||||||| || ||||| ||||| || | ||||| || ||
Sbjct 7621 GAAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 7680
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| ||||| ||||||||| |||||||| || | |||
Sbjct 7681 GGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 7740
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| | ||||||||||||||| || | |||||| | || |||||||||||
Sbjct 7741 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7793
Score = 150 bits (166), Expect = 3e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||| || | ||| || ||||||||||||| |||| || || ||||||||||||
Sbjct 7333 ATACCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCA 7392
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | || | || |||| |||||| ||||||||||| | |||||||| || ||
Sbjct 7393 GATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGG 7452
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| ||||| || || || ||||| ||||| || |||| ||||
Sbjct 7453 GGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCT 7512
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| |||| ||| |||||||| || || | || |||| || |||||||||
Sbjct 7513 ACCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 7563
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | || || | ||||| || | || | |||||| |||||| |||||
Sbjct 6649 ATTCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCA 6708
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || | || |||||||| || ||||||||||| | | ||||||||| ||
Sbjct 6709 GACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGGCGCTGTTGGTCTGGG 6768
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || ||||||||||||||| ||| ||||| || || || || | ||||
Sbjct 6769 GGGATGCCCTCCTTATCTTGTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCT 6828
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || |||||||| || ||||| |||||||| | ||||| |||||
Sbjct 6829 ACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 6878
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||||| || || | ||||| ||| | |||| ||| || || || || ||
Sbjct 7105 ATACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCA 7164
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || | || |||||||| ||||||||||| || | | ||| || ||||||
Sbjct 7165 GACAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGT 7224
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| ||||| |||||| ||| ||||| || || || || | |||
Sbjct 7225 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCA 7284
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||||| |||||| ||||| ||||| | |||||||| || || |||||
Sbjct 7285 ACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 7334
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || | ||||||||| ||||||| ||||| || ||||| ||
Sbjct 5965 ATCCCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCC 6024
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || | || ||||| ||||||||||| || |||| | ||||||||| ||
Sbjct 6025 GACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCGAAGATTAGACGCTGTTGGTCTGGG 6084
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || ||||| || ||| || ||||| ||||| || || | ||
Sbjct 6085 GGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCC 6144
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| ||| ||||| || ||||| | || |||| ||| ||||||||
Sbjct 6145 ACCTCTAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 6194
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||||| || || | ||||||||| | |||| |||||| || || || ||
Sbjct 6877 ATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCA 6936
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || | || || | || || |||||||| || | | ||||| || ||
Sbjct 6937 GACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGG 6996
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||||||||| || || |||||||| || || || || | ||
Sbjct 6997 GGAATACCCTCTTTATCTTGAATCTTTGCCTTTACATTTTCAATGGTGTCAGATGGCTCC 7056
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||| || || || || |||| ||| || | ||||| |||||
Sbjct 7057 ACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 7106
>seq48995
Length=1108
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || || | ||||||||||||||||| || || ||| || || |||
Sbjct 449 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCT 390
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || || | |||||| ||||| ||||| | ||||||||||| ||
Sbjct 389 GACAATGTGCGCCCATCTTCAAGTTGTTTTCCAGCGAAAATGAGCCTCTGTTGGTCTGGG 330
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || |||||||| ||||| ||| ||||| || || || || | ||
Sbjct 329 GGAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCA 270
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| |||||||| ||||||||||| | ||||| | || || |||||
Sbjct 269 ACTTCAAGAGTAATAGTTTTACCAGTAAGAGTTTTTACAAAAATTTGCAT 220
Score = 131 bits (144), Expect = 3e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || || | ||||| || ||||||| ||||| ||||||||| ||
Sbjct 221 ATCCCACCTCTTAGACGCAGAACTAAGTGCAAAGTAGATTCTTTTTGAATATTATAGTCA 162
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || ||| | || || | ||||| ||||| ||||| | ||||||||||| ||
Sbjct 161 GACAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGA 102
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| |||||| || ||||| ||| ||||| || | |||
Sbjct 101 GGAATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 42
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
||||| | ||| || ||||| ||||| | ||| ||
Sbjct 41 ACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTT 7
>seq1641
Length=3631
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900
|||| || | |||||| | || | ||| || || | || || ||| || || || |
Sbjct 2386 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAG 2327
Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960
| || | ||| | || || | ||||||||||||||| || || | || ||||| ||||
Sbjct 2326 ACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTG 2267
Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020
| || ||||| |||||||| |||||| ||||||||| ||||||||| || | || |
Sbjct 2266 GAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCGA 2207
Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
| || || |||||||||||||| || | || || | ||| || ||||||
Sbjct 2206 CCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 2157
>seq16183
Length=3749
Score = 129 bits (142), Expect = 1e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || |||| ||||| || ||||||| ||||| ||| || |||||
Sbjct 622 ATTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCA 681
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| | ||| | || || | || || ||||||||||| | ||| || || || ||
Sbjct 682 GATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 741
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| |||||||| || ||||| ||| ||||| || ||||| || | ||
Sbjct 742 GGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCA 801
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | ||| || || || ||||| ||||| || | ||| || ||||||
Sbjct 802 ACTTCCAAAGTGATAGTCTTGCCAGTCAATGTCTTTACGAAAATTTGCATT 852
Score = 123 bits (136), Expect = 5e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || || | ||||||||||||||||| || || |||||| || ||
Sbjct 166 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCA 225
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | ||| | || || | || || ||||||||||| | || |||||||| ||
Sbjct 226 GACAGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGA 285
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| |||||||| |||||||| ||||| || ||||| || || || || | ||
Sbjct 286 GGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCA 345
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| || || || || || ||||| | ||| || | ||||| ||||||
Sbjct 346 ACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 396
Score = 120 bits (132), Expect = 5e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || |||| ||| | ||| ||||||| || || |||||| || ||
Sbjct 394 ATTCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCA 453
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| | ||| | || || | || || ||||||||||| | ||| || || || ||
Sbjct 454 GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 513
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || |||||||| || ||||| || ||||| || ||||| || | |||
Sbjct 514 GGAATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCC 573
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | || || ||||| ||||| | |||||| | ||||| ||||||
Sbjct 574 ACTTCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 624
>seq95541
Length=3042
Score = 125 bits (138), Expect = 1e-23
Identities = 140/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 39416 AGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGC 39475
||| ||||| || ||||| ||| ||||||||| |||||||| ||| || ||| ||
Sbjct 2392 AGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGC 2451
Query 39476 TTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATC 39535
||| | ||||| || |||| || || || || |||||| |||||||||||
Sbjct 2452 TTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAGTTCTCATTAACAATACCATC 2511
Query 39536 AGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATT 39595
||| ||||| ||||||||||| |||| || ||||||||||| ||| ||||||||| |
Sbjct 2512 AGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGTTTCTCACAATCTTTTAATGT 2571
Query 39596 TTCCCAA 39602
||||||
Sbjct 2572 CTCCCAA 2578
Score = 104 bits (114), Expect = 4e-17
Identities = 159/223 (71%), Gaps = 4/223 (2%)
Strand=Plus/Plus
Query 39150 TCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTA 39209
|| |||||||| |||| |||||| || ||||| ||||| ||||| | |||| |||||
Sbjct 1447 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTC 1506
Query 39210 AGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCT 39269
| |||||||||||| ||||| || | || || ||||| ||||| || ||||| ||
Sbjct 1507 AACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCA 1566
Query 39270 ATTATTCTTGCTCCAAACATTAATTTATCAT-CT-AAAATCCAATTTATGGCCCAATCTG 39327
||||| | | |||||| || | || | || ||||| | || ||||| ||||
Sbjct 1567 ATTATACGTTCTCCAA--ATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTG 1624
Query 39328 CtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 39370
| || || || | | | |||| | |||| || || || |||||
Sbjct 1625 CCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 1667
>seq7617
Length=2772
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|| |||||||| ||||||||| || || ||||||||||| ||||| || || || | |
Sbjct 204 TTCTGGTATTCTCCAACTTTTTTCTCAAAGAAGTTTGTTTTGCCTTCCAACGAGATGAGA 145
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATA 38923
||||||||||| |||||||| | ||||| ||
Sbjct 144 TTCATAAAATCGAATGGATTCTGCGTATTGTA 113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903324777607200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |