Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq7824 167 7e-36
seq4354 143 8e-29
seq11297 134 4e-26
seq26891 125 2e-23
seq9936 87.8 5e-12
>seq7824
Length=15956
Score = 167 bits (184), Expect = 7e-36
Identities = 340/497 (68%), Gaps = 10/497 (2%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||||||||| ||||||| | ||| || |||||| || || ||||||| || ||
Sbjct 11045 CCTATCAAATCTACCAGGTCTTAATAAGGCCTTGTCTAAAATGTCCACTCTGTTAGTAGC 11104
Query 288909 TGCCAATACAACAATAGATTCGGT-TTGC-TTAAATCCATCCATACTTGTTAAAATTTGA 288966
|| ||||| |||| | || | | ||| || || |||||||| || || |||
Sbjct 11105 AGCTAATACTACAACA--TTGGTTGTTGTATTGAAACCATCCATTTCCACTAGAAGCTGA 11162
Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026
||||| || | ||| ||| || || || | || | | | || ||| |||||
Sbjct 11163 TTAAGAGTATTTTCTTGTTCTGAAT--GACCCCCA--AAACTTCTGCCTC-CTC-TTTTT 11216
Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086
||||||||||||| ||||| ||||| || | | ||| |||| || || | || |||
Sbjct 11217 CTACCAACAGCATCTATTTCATCAATAAATAATATACAGGGAGCATGTTTCCGTGCCATT 11276
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
| || | || || || | || | |||| ||||||| ||||||||| ||| || |||
Sbjct 11277 GAGAACATATCCCTGACCCTAGAGGGACCAACACCAACAAACATTTCTAAAAACTCTGAA 11336
Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206
| |||||| ||| || | ||||| || || || ||| ||| | || ||||| ||
Sbjct 11337 CCTGATACTGTAATAAAGGGAACATTAGCCTCTCCAGCTGTTGCTTTAGCTAGAAGAGTT 11396
Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266
||||| |||||||| ||||| ||||| ||||||| || | ||| || || |
Sbjct 11397 TTACCAGTTCCAGGGGGTCCTGTTAATAAGGCTCCCTTAGGAATTTTAGCTCCTAAATCA 11456
Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326
|||||| || |||| |||| || || | |||| |||| || |||| ||| || ||
Sbjct 11457 ATATATTGCTGAGGGTTCTTCAAGAAATTGACAAATTCCATAATTTCAATTTTAGCTTCC 11516
Query 289327 TCACATCCTGCTACATC 289343
||||| || || |||||
Sbjct 11517 TCACAACCAGCAACATC 11533
>seq4354
Length=17770
Score = 143 bits (158), Expect = 8e-29
Identities = 235/336 (70%), Gaps = 2/336 (1%)
Strand=Plus/Plus
Query 289023 ttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082
|||| | || || ||||||||||| ||||| ||||| | ||| |||| | ||| | | ||
Sbjct 6381 TTTTCTTCCTACTGCATCAATTTCATCAATAAAAATAATACAAGGAGCACTTTTTTTAGC 6440
Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142
| | | ||| | |||||| | | || ||||||| |||||| | | |||| |||||||
Sbjct 6441 AGTAGTAAACATTTCTCTAATTCTTGAAGCTCCAACTCCAACAAAAACTTCTTCAAATTC 6500
Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202
|||| | || | | || ||| | |||| |||||| || || ||||| | || | |
Sbjct 6501 AGAACCAGAAATTGAAAAGAAAGGAACATCTGCTTCACCAGCAACTGCTTTTGCTAATAA 6560
Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAG 289261
| |||||| || ||||| ||||| | | |||||||| ||||| ||| |||| ||||
Sbjct 6561 AGCCTTACCAGTACCAGGCGGTCCTACAAGAAGAACTCCTTTTGGCACTCTTGCACCCAT 6620
Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321
| |||||| | || ||||||||| | |||| ||| || | ||| |||||
Sbjct 6621 TTG-TGCATATTTTTGTGGAAACTTTAAAAAATGAACAACTTCTTCTAATTCCAATTTTT 6679
Query 289322 CCTCATCACATCCTGCTACATCAGCAAAAGTAATAT 289357
| || | | || || ||||||| ||| || |||
Sbjct 6680 CTTCTTTAATACCGGCAACATCAGTAAATCTAGTAT 6715
>seq11297
Length=12984
Score = 134 bits (148), Expect = 4e-26
Identities = 578/899 (64%), Gaps = 36/899 (4%)
Strand=Plus/Minus
Query 155475 GGGTAAAAATTCACATCAATAATGTTATTTAAATTT---GTAACCAATACCTTGGTTACG 155531
|| |||||||| |||||||||| || ||||||||| || || ||| ||| || |
Sbjct 11943 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTAC-AAT--CTTTGTGATT 11887
Query 155532 TCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATA 155591
||| |||||| | | | |||| | |||| ||| |||||||| ||| | ||
Sbjct 11886 TCTTTTAATTTTTTAAAATTAAATCTGTTATTTTCA---ACAAACATGTTAAGTGCTATG 11830
Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCAC 155651
|| || || || || || || || | || |||||| |||| |||| |||
Sbjct 11829 GAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAA 11770
Query 155652 AGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCC 155711
|| || || || || ||||| | ||| || || ||| || |||||||||||||||
Sbjct 11769 AGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCC 11710
Query 155712 TTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT---CTTTAGCCAG 155768
|| || | |||||||| || || ||||||| || || || | ||| ||| |||
Sbjct 11709 TTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTT---CCAT 11653
Query 155769 AGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTT--CATATACA 155826
| || | || | | ||| || | ||| ||| |||||||| ||||||
Sbjct 11652 AACTCTTGAGCTCTGACTTGTTTTATAAATCGTTTTTCTTCTTCATATTTGGCATATA-- 11595
Query 155827 GCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAA 155884
|||| || ||||| || | || ||| || ||||| || | || || || |
Sbjct 11594 --GTTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACAATCATGAGGACACAT 11537
Query 155885 CAGCGACCAAATTTTATTACCGAT--TACACGCTCCATAAATACATCACTCGCCCAAATA 155942
|| ||||| || || || | ||| | | |||||| | ||| ||| | |
Sbjct 11536 GAGACTCCAAACTTCAT--CCTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAA 11479
Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGATTCTTCCGTAGCTCTAA 156001
||||| || || || || || | || || | || ||| |||||| || || ||
Sbjct 11478 GCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCTTCTTTAAATCCAA 11420
Query 156002 GAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATTCCT 156058
|||||| ||||| | ||| ||||| | ||| || ||||| || | |
Sbjct 11419 GAATTCAAATATATCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTT 11360
Query 156059 CTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAAT 156118
|| ||||| ||||||||||| | || || || || | || | | ||| || | |
Sbjct 11359 GTTTCCACCTTGATCTACATATCTGGCGGTATTGTTATACACTCTCAACATTGGCACTAG 11300
Query 156119 ACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT--TATGA 156176
|||||| || ||||| || || || | ||||| ||||| || |||
Sbjct 11299 ACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGAACC--CTGAGCTCTGATGCAATGT 11242
Query 156177 ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTG 156236
|||||| || || ||||| | ||||||||||| || |||| |||| |||||
Sbjct 11241 GTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCA 11182
Query 156237 AAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGT 156296
|||||||||||||| |||||||| ||| | || || | || || | || ||
Sbjct 11181 AAAATACCTTCAATGCTATCATCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGC 11122
Query 156297 CGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|| ||||| | ||| ||| |||||||| ||||||| ||||||| || | |||||
Sbjct 11121 CGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACAT 11063
>seq26891
Length=10613
Score = 125 bits (138), Expect = 2e-23
Identities = 208/295 (71%), Gaps = 8/295 (3%)
Strand=Plus/Plus
Query 302553 ATCATAACCAATCATAA-TGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAG 302611
||||||| | ||||| || || ||||| ||| ||||||||||| ||||| |||||||
Sbjct 8885 ATCATAATGTACCATAACTGACT-CCATAGCCTTTATTAAACGACGTTGAATGTAACCAG 8943
Query 302612 TTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGA 302671
|| || ||||||||||| |||||||| ||||| ||||||| ||||| || |||||
Sbjct 8944 TTTCAGCAGTTTTTACAGCGGTATCAATGAGACCTTCACGACCTCCCATGGCGTGGAAAT 9003
Query 302672 ATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731
| | ||| ||| | || ||| | || | || |||||||| | | || |
Sbjct 9004 AAAACTCAGAGGGTGTCAAGCCGGCAAGGTAAGAATTTTCGACGAAACCTCTAGATTCTG 9063
Query 302732 G--CG-AATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGA 302788
| || ||||||| ||| | || ||||||| || || || | | ||| | || |
Sbjct 9064 GACCGTAATCGTC---TTTGATGAAATGTGGCAATGTTCTTTTACGAAAACCGAACGGAA 9120
Query 302789 TACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|||||||||| ||||||||||| || || | || | ||| | ||| || || ||
Sbjct 9121 TACGCTTTCCTTCAACGTTCTGTTGCCCTACACAAGCAATAACCTGTGAGATGTT 9175
>seq9936
Length=26904
Score = 87.8 bits (96), Expect = 5e-12
Identities = 389/598 (65%), Gaps = 25/598 (4%)
Strand=Plus/Plus
Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463
|| || |||||||| |||||| || || | | ||| | |||||| | ||| | ||
Sbjct 17431 GCTATCAGACCACAGAAATTACAAACGTGAATACGGTACGGATCAGAAACTTCAAAGAGA 17490
Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523
|| | | ||| | | || ||||| | || ||||||||| |||||||| ||
Sbjct 17491 CGTTCTCTCAAGAACTGTGCGGCGCCGTGGGCGATTTGACAATCACGTTCCATTTCCCCA 17550
Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACG-AGTGAGATTA--ACC 251580
||||| | ||| ||||| ||||| | || || ||| ||||| | | ||| |||
Sbjct 17551 AAACGCAAACCCCCATCACGAGCACGCCCTTCCATAGGTTGACGTACCAAAATTTGTACC 17610
Query 251581 ATAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640
|| || | | | || || |||| |||||||||||| |||||||||||
Sbjct 17611 ---GGTCCTCTTGCTCTCGAGTGAATTTTGTCATCTACCATATGCTTAAGACGCTGGTAA 17667
Query 251641 AATGCGGGACCGATGAAGATGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATA 251700
||| |||||| | ||| | || | || | |||||| || ||||||||||
Sbjct 17668 TATGTGGGACCCAAGAATACTTGCGCATTAATCTTTCGTCCAGTATGACCGTTATACATC 17727
Query 251701 ACTTCGTTTCCATTAGAT-TCATAACCAAGTTTCTGTAGCTCTGAAGCAATAT-CACCAA 251758
|||||||| || | || | ||| || | ||||| |||| ||| | | ||
Sbjct 17728 ACTTCGTTACC-TCGGAGGTGATAGCCGTACTCTTGTAGTAAAGAAGAAATTTTCTGCA- 17785
Query 251759 TCTTGAAT----TTGCTAAAACTGGTGC--CGTCTCCGTAAAGACCCAT-TTGAATCAAC 251811
| | || | | |||| ||||| |||| ||| ||| | || || | |
Sbjct 17786 -CGTTAACAGCATCGTTAAA--TGGTGTTGCGTCACCGATTTCTCCCTTGTTTGATGA-C 17841
Query 251812 ACTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGG 251871
|| || ||| || || ||| || | || ||||||||| || || ||||||
Sbjct 17842 ACCTTTCCTTGAATACATTCAATCAAGTGACCAATTGTCATACGAGAAGGGATGGCATGG 17901
Query 251872 GGATTGATGATGATGTCGGGTTTCAGTCCATCAGCA-GTGAAGGGCATATCCTTTTCCTC 251930
||||| || ||||| || ||| | | || || ||| || || |||||||| | || ||
Sbjct 17902 GGATTAATAATGATATCTGGTGTTAAGCCCTC-GCATGTAAACGGCATATCTTCTTG-TC 17959
Query 251931 AATAATGT-TTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
||| || ||||| ||||| ||||| |||||||||||| |||||||| |||||
Sbjct 17960 GATACTGGATTCCACAGGTTCCTTTTTGACCGTGACGAGAAGCAAACTTATCTCCAAT 18017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1468798789876308
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