Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq7824 167 7e-36 seq4354 143 8e-29 seq11297 134 4e-26 seq26891 125 2e-23 seq9936 87.8 5e-12 >seq7824 Length=15956 Score = 167 bits (184), Expect = 7e-36 Identities = 340/497 (68%), Gaps = 10/497 (2%) Strand=Plus/Plus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 ||||||||| ||||||| | ||| || |||||| || || ||||||| || || Sbjct 11045 CCTATCAAATCTACCAGGTCTTAATAAGGCCTTGTCTAAAATGTCCACTCTGTTAGTAGC 11104 Query 288909 TGCCAATACAACAATAGATTCGGT-TTGC-TTAAATCCATCCATACTTGTTAAAATTTGA 288966 || ||||| |||| | || | | ||| || || |||||||| || || ||| Sbjct 11105 AGCTAATACTACAACA--TTGGTTGTTGTATTGAAACCATCCATTTCCACTAGAAGCTGA 11162 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 ||||| || | ||| ||| || || || | || | | | || ||| ||||| Sbjct 11163 TTAAGAGTATTTTCTTGTTCTGAAT--GACCCCCA--AAACTTCTGCCTC-CTC-TTTTT 11216 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 ||||||||||||| ||||| ||||| || | | ||| |||| || || | || ||| Sbjct 11217 CTACCAACAGCATCTATTTCATCAATAAATAATATACAGGGAGCATGTTTCCGTGCCATT 11276 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 | || | || || || | || | |||| ||||||| ||||||||| ||| || ||| Sbjct 11277 GAGAACATATCCCTGACCCTAGAGGGACCAACACCAACAAACATTTCTAAAAACTCTGAA 11336 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | |||||| ||| || | ||||| || || || ||| ||| | || ||||| || Sbjct 11337 CCTGATACTGTAATAAAGGGAACATTAGCCTCTCCAGCTGTTGCTTTAGCTAGAAGAGTT 11396 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 ||||| |||||||| ||||| ||||| ||||||| || | ||| || || | Sbjct 11397 TTACCAGTTCCAGGGGGTCCTGTTAATAAGGCTCCCTTAGGAATTTTAGCTCCTAAATCA 11456 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 |||||| || |||| |||| || || | |||| |||| || |||| ||| || || Sbjct 11457 ATATATTGCTGAGGGTTCTTCAAGAAATTGACAAATTCCATAATTTCAATTTTAGCTTCC 11516 Query 289327 TCACATCCTGCTACATC 289343 ||||| || || ||||| Sbjct 11517 TCACAACCAGCAACATC 11533 >seq4354 Length=17770 Score = 143 bits (158), Expect = 8e-29 Identities = 235/336 (70%), Gaps = 2/336 (1%) Strand=Plus/Plus Query 289023 ttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082 |||| | || || ||||||||||| ||||| ||||| | ||| |||| | ||| | | || Sbjct 6381 TTTTCTTCCTACTGCATCAATTTCATCAATAAAAATAATACAAGGAGCACTTTTTTTAGC 6440 Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142 | | | ||| | |||||| | | || ||||||| |||||| | | |||| ||||||| Sbjct 6441 AGTAGTAAACATTTCTCTAATTCTTGAAGCTCCAACTCCAACAAAAACTTCTTCAAATTC 6500 Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 |||| | || | | || ||| | |||| |||||| || || ||||| | || | | Sbjct 6501 AGAACCAGAAATTGAAAAGAAAGGAACATCTGCTTCACCAGCAACTGCTTTTGCTAATAA 6560 Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAG 289261 | |||||| || ||||| ||||| | | |||||||| ||||| ||| |||| |||| Sbjct 6561 AGCCTTACCAGTACCAGGCGGTCCTACAAGAAGAACTCCTTTTGGCACTCTTGCACCCAT 6620 Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321 | |||||| | || ||||||||| | |||| ||| || | ||| ||||| Sbjct 6621 TTG-TGCATATTTTTGTGGAAACTTTAAAAAATGAACAACTTCTTCTAATTCCAATTTTT 6679 Query 289322 CCTCATCACATCCTGCTACATCAGCAAAAGTAATAT 289357 | || | | || || ||||||| ||| || ||| Sbjct 6680 CTTCTTTAATACCGGCAACATCAGTAAATCTAGTAT 6715 >seq11297 Length=12984 Score = 134 bits (148), Expect = 4e-26 Identities = 578/899 (64%), Gaps = 36/899 (4%) Strand=Plus/Minus Query 155475 GGGTAAAAATTCACATCAATAATGTTATTTAAATTT---GTAACCAATACCTTGGTTACG 155531 || |||||||| |||||||||| || ||||||||| || || ||| ||| || | Sbjct 11943 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTAC-AAT--CTTTGTGATT 11887 Query 155532 TCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATA 155591 ||| |||||| | | | |||| | |||| ||| |||||||| ||| | || Sbjct 11886 TCTTTTAATTTTTTAAAATTAAATCTGTTATTTTCA---ACAAACATGTTAAGTGCTATG 11830 Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCAC 155651 || || || || || || || || | || |||||| |||| |||| ||| Sbjct 11829 GAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAA 11770 Query 155652 AGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCC 155711 || || || || || ||||| | ||| || || ||| || ||||||||||||||| Sbjct 11769 AGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCC 11710 Query 155712 TTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT---CTTTAGCCAG 155768 || || | |||||||| || || ||||||| || || || | ||| ||| ||| Sbjct 11709 TTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTT---CCAT 11653 Query 155769 AGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTT--CATATACA 155826 | || | || | | ||| || | ||| ||| |||||||| |||||| Sbjct 11652 AACTCTTGAGCTCTGACTTGTTTTATAAATCGTTTTTCTTCTTCATATTTGGCATATA-- 11595 Query 155827 GCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAA 155884 |||| || ||||| || | || ||| || ||||| || | || || || | Sbjct 11594 --GTTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACAATCATGAGGACACAT 11537 Query 155885 CAGCGACCAAATTTTATTACCGAT--TACACGCTCCATAAATACATCACTCGCCCAAATA 155942 || ||||| || || || | ||| | | |||||| | ||| ||| | | Sbjct 11536 GAGACTCCAAACTTCAT--CCTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAA 11479 Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGATTCTTCCGTAGCTCTAA 156001 ||||| || || || || || | || || | || ||| |||||| || || || Sbjct 11478 GCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCTTCTTTAAATCCAA 11420 Query 156002 GAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATTCCT 156058 |||||| ||||| | ||| ||||| | ||| || ||||| || | | Sbjct 11419 GAATTCAAATATATCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTT 11360 Query 156059 CTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAAT 156118 || ||||| ||||||||||| | || || || || | || | | ||| || | | Sbjct 11359 GTTTCCACCTTGATCTACATATCTGGCGGTATTGTTATACACTCTCAACATTGGCACTAG 11300 Query 156119 ACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT--TATGA 156176 |||||| || ||||| || || || | ||||| ||||| || ||| Sbjct 11299 ACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGAACC--CTGAGCTCTGATGCAATGT 11242 Query 156177 ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTG 156236 |||||| || || ||||| | ||||||||||| || |||| |||| ||||| Sbjct 11241 GTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCA 11182 Query 156237 AAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGT 156296 |||||||||||||| |||||||| ||| | || || | || || | || || Sbjct 11181 AAAATACCTTCAATGCTATCATCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGC 11122 Query 156297 CGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 || ||||| | ||| ||| |||||||| ||||||| ||||||| || | ||||| Sbjct 11121 CGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACAT 11063 >seq26891 Length=10613 Score = 125 bits (138), Expect = 2e-23 Identities = 208/295 (71%), Gaps = 8/295 (3%) Strand=Plus/Plus Query 302553 ATCATAACCAATCATAA-TGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAG 302611 ||||||| | ||||| || || ||||| ||| ||||||||||| ||||| ||||||| Sbjct 8885 ATCATAATGTACCATAACTGACT-CCATAGCCTTTATTAAACGACGTTGAATGTAACCAG 8943 Query 302612 TTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGA 302671 || || ||||||||||| |||||||| ||||| ||||||| ||||| || ||||| Sbjct 8944 TTTCAGCAGTTTTTACAGCGGTATCAATGAGACCTTCACGACCTCCCATGGCGTGGAAAT 9003 Query 302672 ATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731 | | ||| ||| | || ||| | || | || |||||||| | | || | Sbjct 9004 AAAACTCAGAGGGTGTCAAGCCGGCAAGGTAAGAATTTTCGACGAAACCTCTAGATTCTG 9063 Query 302732 G--CG-AATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGA 302788 | || ||||||| ||| | || ||||||| || || || | | ||| | || | Sbjct 9064 GACCGTAATCGTC---TTTGATGAAATGTGGCAATGTTCTTTTACGAAAACCGAACGGAA 9120 Query 302789 TACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 |||||||||| ||||||||||| || || | || | ||| | ||| || || || Sbjct 9121 TACGCTTTCCTTCAACGTTCTGTTGCCCTACACAAGCAATAACCTGTGAGATGTT 9175 >seq9936 Length=26904 Score = 87.8 bits (96), Expect = 5e-12 Identities = 389/598 (65%), Gaps = 25/598 (4%) Strand=Plus/Plus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463 || || |||||||| |||||| || || | | ||| | |||||| | ||| | || Sbjct 17431 GCTATCAGACCACAGAAATTACAAACGTGAATACGGTACGGATCAGAAACTTCAAAGAGA 17490 Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523 || | | ||| | | || ||||| | || ||||||||| |||||||| || Sbjct 17491 CGTTCTCTCAAGAACTGTGCGGCGCCGTGGGCGATTTGACAATCACGTTCCATTTCCCCA 17550 Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACG-AGTGAGATTA--ACC 251580 ||||| | ||| ||||| ||||| | || || ||| ||||| | | ||| ||| Sbjct 17551 AAACGCAAACCCCCATCACGAGCACGCCCTTCCATAGGTTGACGTACCAAAATTTGTACC 17610 Query 251581 ATAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640 || || | | | || || |||| |||||||||||| ||||||||||| Sbjct 17611 ---GGTCCTCTTGCTCTCGAGTGAATTTTGTCATCTACCATATGCTTAAGACGCTGGTAA 17667 Query 251641 AATGCGGGACCGATGAAGATGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATA 251700 ||| |||||| | ||| | || | || | |||||| || |||||||||| Sbjct 17668 TATGTGGGACCCAAGAATACTTGCGCATTAATCTTTCGTCCAGTATGACCGTTATACATC 17727 Query 251701 ACTTCGTTTCCATTAGAT-TCATAACCAAGTTTCTGTAGCTCTGAAGCAATAT-CACCAA 251758 |||||||| || | || | ||| || | ||||| |||| ||| | | || Sbjct 17728 ACTTCGTTACC-TCGGAGGTGATAGCCGTACTCTTGTAGTAAAGAAGAAATTTTCTGCA- 17785 Query 251759 TCTTGAAT----TTGCTAAAACTGGTGC--CGTCTCCGTAAAGACCCAT-TTGAATCAAC 251811 | | || | | |||| ||||| |||| ||| ||| | || || | | Sbjct 17786 -CGTTAACAGCATCGTTAAA--TGGTGTTGCGTCACCGATTTCTCCCTTGTTTGATGA-C 17841 Query 251812 ACTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGG 251871 || || ||| || || ||| || | || ||||||||| || || |||||| Sbjct 17842 ACCTTTCCTTGAATACATTCAATCAAGTGACCAATTGTCATACGAGAAGGGATGGCATGG 17901 Query 251872 GGATTGATGATGATGTCGGGTTTCAGTCCATCAGCA-GTGAAGGGCATATCCTTTTCCTC 251930 ||||| || ||||| || ||| | | || || ||| || || |||||||| | || || Sbjct 17902 GGATTAATAATGATATCTGGTGTTAAGCCCTC-GCATGTAAACGGCATATCTTCTTG-TC 17959 Query 251931 AATAATGT-TTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||| || ||||| ||||| ||||| |||||||||||| |||||||| ||||| Sbjct 17960 GATACTGGATTCCACAGGTTCCTTTTTGACCGTGACGAGAAGCAAACTTATCTCCAAT 18017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1468798789876308