Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq16802 102 1e-15 seq172 98.7 1e-14 >seq16802 Length=13378 Score = 102 bits (112), Expect = 1e-15 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || || |||||| | | || || || |||| |||||| | || | || |||||| Sbjct 1138 GCGAGCTCGCCGGGAAGGAGGAGACGGACGGAGGTCTGCACTTCCCTCGACGTGATCGTT 1197 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 | |||||| |||||||||| ||| ||||||| ||||||| || | || ||| Sbjct 1198 GACCTCTTGTTGTAGTGCGCCAGGCGGGACGCCTCGGCCGCGATGCGTTCAAAAATATCG 1257 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||||||| || ||||| | ||||| | ||| | ||||| || ||| ||||| ||| Sbjct 1258 TTGACAAAGGAATTCATAATAGACATGGCCTTACTCGAGATCCCAGTGTCCGGGTGAACC 1317 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| | ||| ||||| ||| Sbjct 1318 TGCTTCAACACTTTGTAAATG 1338 >seq172 Length=6210 Score = 98.7 bits (108), Expect = 1e-14 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | || | ||||| |||||| | ||| | | || Sbjct 185 GCTTGGCCAACTCACCGGGCAACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGA 126 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| | |||||| |||| || || || ||||||| | |||| || |||| | Sbjct 125 TCGTGGACCTCTTGTTGTAGTGGGCGAGTCGCGACGCCTCGGCGGCGATACGCTCGAAAA 66 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||||||| |||| ||||||| || ||| |||| Sbjct 65 TGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGCTGGAGATTCCGGTGTCCGGGT 6 Query 1254523 GCAC 1254526 | || Sbjct 5 GGAC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6094001957286628