Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_021861.1 Length=30910 Score E Sequences producing significant alignments: (Bits) Value seq1464 131 3e-26 seq1539 118 2e-22 seq3145 96.9 7e-16 >seq1464 Length=66918 Score = 131 bits (144), Expect = 3e-26 Identities = 222/317 (70%), Gaps = 6/317 (2%) Strand=Plus/Plus Query 4973 TGATAAATAACGTAGTTTTAGTCGGAAGACTAACTAAAGATGTAGAACTTAGATATACTC 5032 |||| |||||||| || |||| ||| | || || |||||| ||| | ||||||| Sbjct 17855 TGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACAT 17914 Query 5033 CACAAAATCAA-GCTACAGCAACTTTCTCGCTTGCAGTGAGTCGCTCTTTCAAAAATGCC 5091 || | || ||| |||||| ||| | | || || | ||| |||| | ||| Sbjct 17915 CA-AGTGGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGA--GCC 17971 Query 5092 AAT--GGAGAACGTGAAACAGATTTTATTAACTGTGTTATCTGGCGACAACAAGCTGAAA 5149 || || | ||||| | ||||||||||| ||||| || |||||| || ||| |||| Sbjct 17972 AAAACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAA 18031 Query 5150 ATATGGCAAATTTCACACATAAAGGAAGCTTGATTGGTATCACTGGTAGAATCCAAACTC 5209 | ||||| | |||||||||||| | | ||| | |||||| | || ||||| | Sbjct 18032 CACTAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGC 18091 Query 5210 GAAACTATGAAAATCAACAAGGACAACGTGTTTACGTTACTGAAGTTGTTGCAGATAGTT 5269 | ||||| |||||||||||||||||||| ||||| || ||||| ||||| || | | Sbjct 18092 GTTCTTATGATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACT 18151 Query 5270 TCCAACTTCTTGAAAGT 5286 ||||| | | |||||| Sbjct 18152 TCCAATTATTGGAAAGT 18168 >seq1539 Length=57711 Score = 118 bits (130), Expect = 2e-22 Identities = 228/331 (69%), Gaps = 4/331 (1%) Strand=Plus/Minus Query 4964 GAGA-AAAAATGATAAATAACGTAGTTTTAGTCGGAAGACTAACTAAAGATGTAGAACTT 5022 |||| ||||||||| ||||| ||| |||||| ||| | |||| |||||| || | Sbjct 16182 GAGATAAAAATGATCAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCCCGATTTA 16123 Query 5023 AGATATACTCCACAAAATCA-AGCTACAGCAACTTTCTCGCTTGCAGTGAGTCGCTCTTT 5081 | ||||| || | || ||| || ||||| | | || || | |||| ||| Sbjct 16122 CGTTATACCGCA-AGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTT 16064 Query 5082 CAAAAATGCCAATGGAGAACGTGAAACAGATTTTATTAACTGTGTTATCTGGCGACAACA 5141 | ||| || || | || ||| | |||||||| || ||||| || ||||| ||| Sbjct 16063 TACGAATCAAAACGGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACC 16004 Query 5142 AGCTGAAAATATGGCAAATTTCACACATAAAGGAAGCTTGATTGGTATCACTGGTAGAAT 5201 ||| |||| ||||| | || | | || || || || || || || || | || Sbjct 16003 AGCGGAAACGATGGCTACATTAGCTAAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGAT 15944 Query 5202 CCAAACTCGAAACTATGAAAATCAACAAGGACAACGTGTTTACGTTACTGAAGTTGTTGC 5261 ||||| || | ||||| || || |||||||| ||||| ||||| ||||||||||| || Sbjct 15943 TCAAACGCGGACTTATGACAACCAGCAAGGACAGCGTGTCTACGTGACTGAAGTTGTGGC 15884 Query 5262 AGATAGTTTCCAACTTCTTGAAAGTAGAAGC 5292 |||| ||||||||| | ||||||| |||| Sbjct 15883 CGATAATTTCCAACTATTAGAAAGTA-AAGC 15854 >seq3145 Length=45091 Score = 96.9 bits (106), Expect = 7e-16 Identities = 136/190 (72%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 5095 GGAGAACGTGAAACAGATTTTATTAACTGTGTTATCTGGCGACAACAAGCTGAAAATATG 5154 ||||| |||||| |||| || || | ||||| || ||| | ||| ||| |||| || Sbjct 1917 GGAGAGCGTGAAGCAGACTTCGTTCAATGTGTGATTTGGAGGAAACCAGCGGAAACACTG 1976 Query 5155 GCAAATTTCACACATAAAGGAAGCTTGATTGGTATCACTGGTAGAATCCAAACTCGAAAC 5214 || |||| | | | |||| |||| | || | || || |||| ||||| || Sbjct 1977 GCTAATTATGCTCGCAGGGGAACCTTGCTAGGCGTGACCGGACGAATTCAAACACGTTCT 2036 Query 5215 TATGAAAATCAACAAGGACAACGTGTTTACGTTACTGAAGTTGTTGCAGATAGTTTCCAA 5274 ||||| ||||| ||||| ||||||||||| || || |||||||| ||||| | ||| ||| Sbjct 2037 TATGACAATCAGCAAGGGCAACGTGTTTATGTAACGGAAGTTGTAGCAGAGAATTTTCAA 2096 Query 5275 CTTCTTGAAA 5284 || ||| || Sbjct 2097 -TTGTTGGAA 2105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98602599696576