Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq172 143 4e-28 seq16802 120 5e-21 seq158839 105 1e-16 >seq172 Length=6210 Score = 143 bits (158), Expect = 4e-28 Identities = 168/225 (75%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||||| || ||| ||| Sbjct 224 TGTACTTGGTGACGGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCACCGGGCA 165 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 | || | ||||| |||||| | ||| | || ||||||| | |||||| ||| Sbjct 164 ACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGATCGTGGACCTCTTGTTGTAGT 105 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||| | ||||||| | |||| || |||| |||||||| || |||||||| Sbjct 104 GGGCGAGTCGCGAC--GCCTCGGCGGCGATACGCTCGAAAATGTCGTTCACGAACGAGTT 47 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCAC 1485692 |||||| ||||||| ||| ||||||| || ||| ||||| || Sbjct 46 CATGATGGACATCGCCTTGCTGGAGATTCCGGTGTCCGGGTGGAC 2 >seq16802 Length=13378 Score = 120 bits (132), Expect = 5e-21 Identities = 171/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 || || ||||||||||| || ||||| ||| ||||| | || || |||||| | | | Sbjct 1096 TATTTAGTGACGGCCTTCGTTCCCTCGCTGACAGCGTGTTTCGCGAGCTCGCCGGGAAGG 1155 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || || |||| |||||| | || | | |||||| | |||||| | || Sbjct 1156 AGGAGACGGACGGAGGTCTGCACTTCCCTCGACGTGATCGTTGACCTCTTGTTGTAGTGC 1215 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 ||||||||| ||||||| ||||||| || | || ||||||||||| || ||||| Sbjct 1216 GCCAGGCGGGACGCCTCGGCCGCGATGCGTTCAAAAATATCGTTGACAAAGGAATTCATA 1275 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||||| | || | ||||| || ||| ||||| |||||||| | ||| |||||| Sbjct 1276 ATAGACATGGCCTTACTCGAGATCCCAGTGTCCGGGTGAACCTGCTTCAACACTTTGTAA 1335 Query 1485712 A 1485712 | Sbjct 1336 A 1336 >seq158839 Length=473 Score = 105 bits (116), Expect = 1e-16 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||| || ||| |||||| || || ||| Sbjct 72 TGTACTTGGTGACAGCCTTGGTTCCCTCACTGACAGCATGCTTGGCCAACTCTCCAGGCA 131 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||| || || || |||||||| || || ||| || ||||||||| | Sbjct 132 AAAGCAGGCGAACAGCCGTTTGGATCTCCCGACTGGTGATGGTCGAGCGCTTGTTGTAGT 191 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || || |||| | || || |||| || || || ||||| ||||| Sbjct 192 GAGCTAGACGAGACGCTTCGGCAGCAATTCGCTCGAAAATATCATTTACAAAGCTGTTCA 251 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||||| || || || || ||| || || ||||||||||| ||||||| Sbjct 252 TTATGCTCATCGCCTTCGACGAAATTCCGGTGTCAGGATGGACCTGCTTGAGAACCTTGT 311 Query 1485710 AAA 1485712 ||| Sbjct 312 AAA 314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7899217534776876