Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_022914.1 Length=43394 Score E Sequences producing significant alignments: (Bits) Value seq1616 125 2e-24 >seq1616 Length=186323 Score = 125 bits (138), Expect = 2e-24 Identities = 298/436 (68%), Gaps = 16/436 (4%) Strand=Plus/Minus Query 911 CAATTATTTACTGCTGCAAATGATAAAAAACAGGCTAGTATCGTGTTTAACATGGTTGCA 970 ||| ||||| | |||| |||||||||||||| || ||||| | ||| |||||| Sbjct 184551 CAAATATTTTGTACTGCTAATGATAAAAAACAAGCGAGTATTGCATTTGACATGGCAAGG 184492 Query 971 AAGCAACT-GATGTATTTCGTATCACAAGTACCAGA-ATTAAAGAAAGATGTTAAAAAGG 1028 |||||| | |||| ||| ||| || || || |||| | |||| |||| | Sbjct 184491 AAGCAATTAGATG-CTTTAAGATCTAAATATCCTGATATTAGA-AAAGCAACTAAACGTG 184434 Query 1029 TACGTGAGTTGTTACAAAACTTAAAAGATGGCTCGTATGTTATGCCTCTATCGCGTGATA 1088 | || ||||| | |||| ||| ||||| || || ||| ||| || || | Sbjct 184433 TTCGAGAGTTTCTTAAAAATCTAAGAGATGAATCATACATTACTGTTCTTTCTAAAGAAA 184374 Query 1089 CGGGTGCAGTTGACGGTTTCGAACCAT-TCTTGGCGGTTATTGATGAATATCATGCAGCG 1147 | |||||| |||| || || || || | | |||| || ||||||| ||| ||| | Sbjct 184373 CAGGTGCAATTGATGGATTTGAGCCTTATATTGG-AGTGTTTGATGAGTATGGAGCATCA 184315 Query 1148 AAAACGAATGAAATGATAGAACTTATACAATCTGGTCAAGGTAACTTACTACAAT-CGAT 1206 ||||| |||||||||| ||| | || |||| |||||||| | ||| | ||| || | Sbjct 184314 AAAACAGATGAAATGATGGAATTGATTGAATCAGGTCAAGGACAATTA-GATAATCCGTT 184256 Query 1207 GATATTTATTATCTCTACTGCTGGTTTTAATCTTAATGCACCAATGTATACAGATGAATG 1266 || || ||||| ||||| || ||||||| | |||| || ||||||| || ||||| Sbjct 184255 AATTTTAATTATTTCTACCGCCAATTTTAATTTAAATGTCCCCATGTATAGAGTTGAATA 184196 Query 1267 GCCA--TACGCAAAAGAAATATTGGAAGAAACGTACGAAGATGAAGAATATTTTGCAGTT 1324 ||| || | || || ||||| |||||||| |||||||| || | ||| | || Sbjct 184195 TCCACGTATG--AAGGACATATTAGAAGAAACACTAGAAGATGAGGAGCAATTT--ATTT 184140 Query 1325 ATTTA--TGAACAAGA 1338 || || |||||||| Sbjct 184139 ATATAGCAGAACAAGA 184124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138475457127648