Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq32113 129 9e-25 seq16183 125 1e-23 seq1641 104 4e-17 seq48995 102 1e-16 >seq32113 Length=13445 Score = 129 bits (142), Expect = 9e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | |||||| | || || ||||| |||||| | || || |||| | || Sbjct 7789 TGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCCG 7730 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||||||| ||||| ||| || ||||||||||| || ||||||| Sbjct 7729 ATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 7670 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | ||||| || || || ||||| || || | || | | || ||||||| Sbjct 7669 AACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTATAATA 7610 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| ||| | || || ||||| || Sbjct 7609 TTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 7576 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | ||||||||||| || ||| | || ||||||| || Sbjct 7561 TGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTCCG 7502 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| || || || ||| ||||| || ||||| || ||||||| Sbjct 7501 ACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAAC 7442 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || |||||| | || ||| | || ||| | |||||||||| Sbjct 7441 AGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATA 7382 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| ||||| || | ||||||||||| || Sbjct 7381 TTCAAAAGGAATCTACCCTACATTTAGTATTGCG 7348 Score = 123 bits (136), Expect = 4e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | |||||||| || ||||| || ||||| | || ||||||| | Sbjct 6877 TGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCTG 6818 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| |||||||||| ||| || ||||| || || || |||| Sbjct 6817 ACACAATTGAGAATGTCAAAGCTAAAATACAAGATAAGGAGGGCATCCCCCCAGACCAAC 6758 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||||||||| || || ||||| || ||| | | || || | ||||| |||| Sbjct 6757 AGCGCCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAATA 6698 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || ||||| || || | || ||||| Sbjct 6697 TTCAGAAAGAGTCAACCCTGCACTTAGT 6670 Score = 118 bits (130), Expect = 2e-21 Identities = 169/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || ||||||||||||||| | || || ||| | | Sbjct 7333 TGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCTG 7274 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| |||||| ||| ||||| ||||| ||||| ||||| | Sbjct 7273 ACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAGC 7214 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| ||||| ||||| || ||| | | || | | || || || | Sbjct 7213 AGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAACA 7154 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | ||||| || || || | ||| ||||| | || | |||| |||| ||||||| Sbjct 7153 TCCAAAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGGTATGCAAATATT 7096 Score = 109 bits (120), Expect = 9e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 |||||||||| | |||||| | || ||||||||||| ||| | || || || ||| | Sbjct 6649 TGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTAGAAGTTGAGCCATCA- 6591 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| ||||||| ||| ||| || ||| ||| ||||| ||||| || |||||| Sbjct 6590 GACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAA 6531 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | || || || || ||||| ||| | || ||| | || | | || || ||| Sbjct 6530 CAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAAT 6471 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || || ||||| || || | || || ||| | || | ||||||||| Sbjct 6470 ATCCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTCCGAGGAGGTA 6422 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || || || || || ||| | || || || | || Sbjct 6193 TGCAGATCTTCGTTAAGACTCTTACTGGGAAGACCATCACTTTAGAGGTGGAGCCATCCG 6134 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| || ||| || ||| || || |||||||| || || |||| Sbjct 6133 ACACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAAC 6074 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || || || |||||||| || || ||| | || | | || ||||| | Sbjct 6073 AGCGTCTAATCTTCGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTATAACA 6014 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | ||||||||||| ||| | ||||||||| Sbjct 6013 TCCAAAAAGAATCTACTTTGCATTTAGTA 5985 >seq16183 Length=3749 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| ||||||| ||||| || ||||| || || | || || ||| | | Sbjct 1078 TGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCTG 1019 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||| ||||| || |||||| || ||||||||||| || ||||||| Sbjct 1018 ATACAATCGAAAACGTAAAGGCAAAGATACAAGACAAGGAAGGCATTCCTCCAGATCAAC 959 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | ||| | |||| ||||||| Sbjct 958 AAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACGCTGTCAGACTATAATA 899 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || || ||||| ||| | || ||||| || || Sbjct 898 TCCAGAAGGAATCTACTTTGCACTTAGTGTTGCG 865 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || || ||||| ||||| | || || ||| | | Sbjct 166 TGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCTG 107 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| || || || || |||||||||||||| || ||||||| Sbjct 106 ACACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCCCCTGATCAAC 47 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 ||||||| ||||| || || |||||| | || ||| Sbjct 46 AAAGACTGATTTTCGCTGGAAAACAACTGGAAGAT 12 >seq1641 Length=3631 Score = 104 bits (114), Expect = 4e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || ||||| ||||| | || || || | Sbjct 2159 TGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTCGAGGCCTCTG 2218 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| ||||||||||| |||||| ||| ||| ||||| |||||||| || || | Sbjct 2219 ATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAGC 2278 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||| |||| ||| | || || | || || || | Sbjct 2279 AACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAACA 2338 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATA 146263 | ||||| ||||| || | ||| | || | ||| | | |||||||| || Sbjct 2339 TTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAACTA 2390 >seq48995 Length=1108 Score = 102 bits (112), Expect = 1e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146044 TAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAA 146103 |||| ||| | || || ||||| || ||| | || || ||| | ||||| || ||| Sbjct 5 TAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCTGATACAATAGAAA 64 Query 146104 ATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTT 146163 |||| || |||||| ||| || ||||| ||||| || || ||||| || || |||| Sbjct 65 ATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAGAGGCTGATTT 124 Query 146164 TTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAAT 146223 | || || ||||| |||| ||| | || | | || |||||||| |||||||||| Sbjct 125 TCGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAATATTCAAAAAGAAT 184 Query 146224 CGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||| | || ||||| | || ||||||| || Sbjct 185 CTACTTTGCACTTAGTTCTGCGTCTAAGAGGTGG 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784593241725280