Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_023500.1 Length=43301 Score E Sequences producing significant alignments: (Bits) Value seq1216 120 8e-23 >seq1216 Length=179962 Score = 120 bits (132), Expect = 8e-23 Identities = 171/238 (72%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 40 GCGGAAAATCGTAAAGCTAGACATGATTATAATATTGAAGACACGATTGAAGCGGGAATT 99 ||| ||||| |||||| | ||||||||| || ||||| || ||||| ||||| Sbjct 52467 GCGCAAAATAAAAAAGCTCGCCATGATTATTCGATCATCGACACAATGGAAGCAGGAATG 52408 Query 100 GTATTGCAAGGCACAGAAATAAAATCAATTCGCCGAGGTAGTGCTAACCTTAAAGATAGT 159 || || ||||| ||||| || ||||| |||||| || || ||| | |||||| | Sbjct 52407 GTTTTACAAGGTACAGAGATCAAATCTATTCGCAATAGTCGTATCAACTTAAAAGATGGA 52348 Query 160 TATGCGCAAGTTAAAAACGGTGAAATGTATTTGAATAATATGCATAT-AGCACCATACGA 218 | || | || | |||||| ||| | |||| ||||| | ||| | ||| || || || Sbjct 52347 TTTGTTCGTGTGAGAAACGGCGAAGCTTTTTTGCATAATGTCCATGTCAGC-CCTTATGA 52289 Query 219 AGAAGGGAATCGTTTTAATCACGATCCTCTTCGTTCTCGAAAATTATTATTGCATAAA 276 | |||||||| |||||||| ||||| || | || ||||||| |||||||||||| Sbjct 52288 ACAAGGGAATATCTTTAATCATGATCCACTAAGAACTAGAAAATTGTTATTGCATAAA 52231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138178422864504