Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_023574.1
Length=128546
Score E
Sequences producing significant alignments: (Bits) Value
seq9304 289 2e-73
seq5392 105 5e-18
>seq9304
Length=29499
Score = 289 bits (320), Expect = 2e-73
Identities = 950/1452 (65%), Gaps = 32/1452 (2%)
Strand=Plus/Minus
Query 68072 TATGAAGACCGCATTGCTTTTAATGCCTTAGTTATGGCTGATGGTGACGAACAATTGGCT 68131
|||||||| || | || || ||||| || | || |||| |||||| || | ||
Sbjct 6963 TATGAAGATCGTGTCGCATTCAATGCGTTGTACTTTGCGAATGGCGACGAAGAACTAGC- 6905
Query 68132 CTTAACATT-GCGCATGAAATGATTTCACAAACCT-ATCAACCTGCAACACCAACATTCT 68189
|||| | || || |||||||||| ||| ||| | ||||||| ||||| || |||| |
Sbjct 6904 CTTAGCTTTAGCTGATGAAATGATC-CACCAACGTTATCAACCAGCAACCCCTTCATTTT 6846
Query 68190 CTAATGCTGGTAAGTTG-CGTGGTGGTAATGCTGTATCATGTTTCCTTTTGAATATTGAA 68248
|||||||| | || ||| ||||| | ||| || |||||| |||| | | |
Sbjct 6845 TGAATGCTGG-ACGTAAACGTCGTGGTGAACTTGTTTCTTGTTTC---TTGACTCAAGTA 6790
Query 68249 ---GATAATATGACGTCTATTGGGCGCTCAGTAAATTCAGTTCTTCAATTGTCTAAAATG 68305
||| |||||| || || || || || | || || | | ||| | || |||
Sbjct 6789 ACGGATGATATGAATTCAATCGGTCGTTCGATCAACTCTGCCTTACAACTTTCACGAATC 6730
Query 68306 GGTGGTGGAGTTGGAATCA-ACTTAACTGATATCCGTCCGTCAGGAGACCCTATCAAGGG 68364
|||||||| ||||| |||| |||| || | | ||| | |||| || ||||| ||
Sbjct 6729 GGTGGTGGTGTTGGGATCACACTTT-CTAACTTACGTGAAGCCGGAGCGCCGATCAAAGG 6671
Query 68365 TATTGAGAATATG--GCTGATGGAGTTGTTCCAATCATGAAACTCTATGAAGATTCATTT 68422
| ||| || ||| || ||||||||| |||||||| | | ||||||| |||
Sbjct 6670 A--TACGAAGGTGCAGCTAGCGGTGTTGTTCCAGTCATGAAATTGTTTGAAGATAGCTTT 6613
Query 68423 TCATATGCCAATCAGTTGGGGACAA-GAAATGGGGCAGGAGTAACTTATCTCAATGTATT 68481
||| | || || || || |||| | | || || || || |||| | || || ||
Sbjct 6612 AGTTATTCGAACCAATTAGG-ACAACGTCAAGGTGCGGGTGTCGTTTATTTAAACGTCTT 6554
Query 68482 CCATAAAGATATTGTTAAATTCCTCTCTACaaaaaaaGAAAATGCTGACGAAAAAGTTCG 68541
||| ||| || | | ||||| || |||||||||||||||| |||||||| ||||
Sbjct 6553 CCACCCAGACATCATGATGTTCCTTTCAGCAAAAAAAGAAAATGCAGACGAAAAGATTCG 6494
Query 68542 TGTTAAAACTCTTTCTCTCGGTGTTGTAGTTCCTGATAAATTCTATGAACTCATTGCTAA 68601
|| || ||| | || || ||||| | || || ||||||||||||||| | |||
Sbjct 6493 CGTGAAGACTTTATCACTTGGTGTGATCGTCCCAGATAAATTCTATGAATTAGCACGTAA 6434
Query 68602 AGGTGAATCAATGTATTTGTTTAGCCCTTATGATATCTACAATGAGTATGGAAAACTAAT 68661
| || ||||||| | || || |||||| | | | || || ||||| | | |
Sbjct 6433 AAACCAAGAAATGTATCTATTCAGTCCTTATAGTGTGGAAAAAGAATATGGTGTGCCATT 6374
Query 68662 GTCTGAAATCAACATCACAGAAATGTATGATGAATTAGTTGAAAACAAAAATATCAAGAA 68721
||| | | | ||||| | ||||| | ||||| | ||| ||||||| ||
Sbjct 6373 TTCTTACGTAGATATCACTGCGGAATATGACAATTTAGTCGCAAATCCAAATATCCGTAA 6314
Query 68722 AGATAAAATCTTTGCTCGTGACCTTGAAGAAGAAATGTCTAAACTTATTCAAGAATCAGG 68781
| | |||||| || ||||| | ||| | ||||| |||||| | ||||| || ||
Sbjct 6313 ACAAAAAATCAAAGCCCGTGATTTAGAAAATGAAATCTCTAAATTACAACAAGAGTCTGG 6254
Query 68782 ATATCCATACATCATCAACATTGATACAGCAAACCAAGAAAATGCTGTTGACGGTGTAAT 68841
||||| || |||||||| |||||||| ||||| | |||||| |||| |||||| |||
Sbjct 6253 TTATCCGTATATCATCAATATTGATACGGCAAATCGTGAAAATCCTGTAGACGGTAAAAT 6194
Query 68842 TAAAATGTCTAACCTTTGCTCTGAAATCCTTCAAGTACAATCTCCATCAGAATTGAACTC 68901
|| ||| |||| | || ||||| || | |||||||| | || || | | ||
Sbjct 6193 TATCATGAGTAACTTATGTTCTGAGATTTTACAAGTACAGACACCTTCTGTCATCAATGG 6134
Query 68902 AGACCAAACTTAT-AAGACTATTGGAACTGACGTATCATGTAACCTTGGTTCAACTAATA 68960
| ||| ||| |||| | | || || ||| | ||||||||| | ||||| || || |
Sbjct 6133 CAAGCAAGAATATGAAGAGT-TAGGGACAGACATCTCATGTAACTTAGGTTCTACAAACA 6075
Query 68961 TTACACATCTTATGGAGTCATCTGACTTCGGAAGCTCTGTTAGAACAGCATTTCGTGCAT 69020
| || | ||||| ||||||| || ||||||| | || ||||||||
Sbjct 6074 TCGTCAATTTGATGGATAGCCCTGACTTTGGTCGCTCTGTCCGCACGATGACTCGTGCAT 6015
Query 69021 TAACCTATGTTGCAGATAGCTCTAACATTGAAGAAGTTCCTACTGTTAAGAACGCCAACG 69080
| || ||| | ||||| || ||||||| | ||||| | | | |||| |||
Sbjct 6014 TGACGTATATCACAGATGCTTCAGACATTGACGTGGTTCCACCGATCCAAAACGGGAACA 5955
Query 69081 ATAAGTATCACTCAGTAGGGCTAGGGGCAATGGGACTACATGGATTCCTTGCTAAAAATG 69140
| | |||| | | || || || || |||||||| ||| | |||| ||| |
Sbjct 5954 AATTGAATCATACGATCGGACTTGGTGCCATGGGACTTCATACTTATTTTGCCAAAGAGC 5895
Query 69141 GTATTCTCTATGGTTCTCCTGAATCAATTGAGTTCACAGGTATGTACTTCCAACTCCTAA 69200
|| |||||||| ||||||||||| || || | | || ||| | | |
Sbjct 5894 AAATGGAATATGGTTCCGAAGAATCAATTGATTTTACCAATGTTTATTTCATGTTGTTGA 5835
Query 69201 ACTACTGGACTCTATTTGAAAGTAATCGAATTGCTATTGAGCGCAATCAAGCTTTCTATA 69260
| |||||||| || |||||||||| || || |||| | || |||| ||| |||
Sbjct 5834 ATTACTGGACACTTGTTGAAAGTAACAATATCGCACGTGAGAGAAAACAAGTCTTCCATA 5775
Query 69261 ACTTTGATAAATCAGAATATGCCAATGGTAAATACTTCAAACGCTATCTACCACGTGTTA 69320
| ||||| ||||||| ||||| | || | || || | ||| | ||| ||
Sbjct 5774 ATTTTGAAAAATCAGCTTATGCAGACGGCACTTATTTTGATAAATATGT--CAC-TGGCG 5718
Query 69321 AATTTAAAAATAACCTTTCTGATACAGTCAAAGAATTGTTTAAAGATGTTGATATTCCAA 69380
|||| || || ||||| ||| | |||||| | | | | |||||| |
Sbjct 5717 AATTCCAACCAAA---ATCTGAACGAGTTGCTGCTTTGTTTGATGGTATCTTTATTCCGA 5661
Query 69381 CTGCACAAGACTGGGTTGACCTACAGGCTTCAAT--TGAAGAACATGGTCTATATAATTC 69438
|||| |||||||||| || | || |||| ||| || ||||| | ||| |
Sbjct 5660 CTGCCCAAGACTGGGAAAACTTGAAGCAAGCAATCATGA--AAGATGGTTTGTATCACCA 5603
Query 69439 TTACCGTTTAGCTGTTGCGCCTACAGGTTCAATTTCTTATATCAACGAAGCTACAGCATC 69498
| ||||||||||| || |||| ||||| |||||||||||||| || ||| |||
Sbjct 5602 AAATCGTTTAGCTGTAGCACCTAATGGTTCTATTTCTTATATCAATGATACTAGTGCAAG 5543
Query 69499 TATTCACCCAAT 69510
||| || || ||
Sbjct 5542 TATCCATCCGAT 5531
Score = 141 bits (156), Expect = 8e-29
Identities = 401/608 (66%), Gaps = 11/608 (2%)
Strand=Plus/Minus
Query 75465 AAAGAAATTGATGGTATTTTTGATTGGACTGCAACAAATCCATATATCGTTCGCAAAACA 75524
|||||||| || | || ||||| ||||| || ||||| ||| | | |||| |
Sbjct 4764 AAAGAAATCGAAGAAATCTTTGAATGGACGAATACCAATCCTTATCTA---CAGAAAAAA 4708
Query 75525 GAAAATCGT-TCAA-GATATCTATGAAAATGGAACTCCTCTACAAAAGAAAGTTGCATCA 75582
| | ||| |||| || ||||| |||| || || || || | || ||| ||||
Sbjct 4707 GCGGAGCGTATCAATGAGATCTACAAAAACGGTACGCCGTTAGAGAAAAAAATTGCGAGT 4648
Query 75583 GTCTTCTTGGAGTCATTTCTGTTCTACTCAGGGTTCTTTACACCCTTGTATTATGCAGGA 75642
||||| || || | || | || |||||||| |||| |||||| | |||||| ||||
Sbjct 4647 GTCTTTTTAGAAACCTTCTTATTTTACTCAGGATTCTATACACCACTTTATTATTTAGGA 4588
Query 75643 CTTGGAAAGATGAAAAATACAGCAGAAATTATTAAACTTATTCTTCGTGATGAATCTGTC 75702
| || | || ||||| || || || | || ||||||| |||||||||
Sbjct 4587 AATAATAAATTAGCCAACGTGGCAGAGATCATCAAGTTGATCATTCGTGACGAATCTGTC 4528
Query 75703 CACGGTGCTTACATTGGATATAAGCATAAATTAGGATTCGCAGAATTAACAGAAACTGAG 75762
|| || | || ||||| ||||| || |||| | | |||||| | ||| ||
Sbjct 4527 CATGGCACGTATATTGGCTATAAATTCCAACTAGGTTACAACGAATTACCTGAAGAAGAA 4468
Query 75763 CAAGAGGAACAT--GAAGAATGGACATTTAATTTGCTCGATAAGCTCTATCAAAATGAAT 75820
||||| ||||| |||| |||| | ||||||| | || | | || |||| |||
Sbjct 4467 CAAGA--AACATTGAAAGACTGGATGTATAATTTGTTATATGAATTATACGAAAACGAAG 4410
Query 75821 TGAAATACACTGAACTTCTTTATGATACTGTGGGTTATACAGAGGACGTGAAACAATTCC 75880
| ||||| ||| | |||||| | | |||| || || || || ||| ||| |
Sbjct 4409 AGCGCTACACAGAAGAATTATATGATCCAATCGGTTGGACGGAAGAAGTCAAAACATT-C 4351
Query 75881 TTAAG-TACAATGCAGACAAGGCTCTTATGAATCTTGGATTTGATACTTTGTTTGAAGTT 75939
||| | ||||||||| | || || | |||||||| ||| | || | | || | |
Sbjct 4350 TTACGCTACAATGCAAATAAAGCATTGATGAATCTAGGAATGGACCCACTATTCCCTGAT 4291
Query 75940 GGTCGTGAAGATATCAACCCTCTCGTAATGAATGGTATTTCAACTGAAACAGCTAACCAT 75999
| ||| ||||||| |||| |||||||| || || |||| ||| ||||||
Sbjct 4290 ACAGCAAACGATGTCAACCCAATCGTGATGAATGGGATCTCTACTGGTACAAGTAACCAC 4231
Query 76000 GATTTCTTCTCAGCGGTAGGTAATGGGTATCTCCTAGGGGAAGTTGAAGCTATGAAAGAT 76059
||||||||||| || || || || || || |||| | || ||||| |||||||||
Sbjct 4230 GATTTCTTCTCTCAAGTCGGAAACGGCTACCTATTAGGTAACGTAGAAGCGATGAAAGAT 4171
Query 76060 GATGACTA 76067
|| || ||
Sbjct 4170 GAAGATTA 4163
>seq5392
Length=101478
Score = 105 bits (116), Expect = 5e-18
Identities = 150/210 (71%), Gaps = 6/210 (3%)
Strand=Plus/Minus
Query 60028 GATTTATCTACCACAGGAAAATGAAGCAATTAATGATAAGTCAGGATATGCAAACTCTGT 60087
||| ||||||||||| ||||| |||||||| ||||||||| | | ||||||| ||
Sbjct 41851 GATCTATCTACCACAAGAAAACGAAGCAATCAATGATAAGACTGCATATGCAGACAGCAA 41792
Query 60088 AATGATTGCAGAAGCTGATAC---AAATGAACTGTTGAGTTCTGACTTTATTGTAGCTGT 60144
||||||||| |||||||| ||| | ||| || |||||| || | || |
Sbjct 41791 AATGATTGCCTTGGCTGATACAGAAAAAGTACTAGAAAG---TGACTTGATGATCGCACT 41735
Query 60145 CCTAGACGGTGCAACAATTGATGTTGGTGTGGCTAGTGAAATTGGAGTTGCCTATGCTAA 60204
||||||| || || |||| || || ||| ||| || || || |||||||||||
Sbjct 41734 TTTAGACGGATTGACGATCGATGCCGGAGTTGCTTCTGAGATCGGTGTCGCCTATGCTAA 41675
Query 60205 AGGCATTCCAGTTATTGGTCTGTATTCAGA 60234
|||||| || | |||||| | ||| ||||
Sbjct 41674 AGGCATCCCGATCATTGGTTTATATACAGA 41645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410420095331068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |