Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_023612.1 Length=39078 Score E Sequences producing significant alignments: (Bits) Value seq1539 100 7e-17 seq1464 82.4 2e-11 seq52331 80.6 7e-11 >seq1539 Length=57711 Score = 100 bits (110), Expect = 7e-17 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 29035 ATGAATAAAGTCATTTTAGTTGGACGTTTAACAAAAGACCCGGAATTACGTTACACACAA 29094 || ||||| || | |||||| ||||| ||||| ||||| || || |||||||| || | Sbjct 16170 ATCAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCCCGATTTACGTTATACCGCA 16111 Query 29095 AGCGGGGTGGCGGTTGCGACCTTTACATTGGCGGTCAACCGCCGCTTTACAAACCAACAA 29154 || || || || || || ||||| || || || || ||| ||||| || ||| | Sbjct 16110 AGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAAC 16051 Query 29155 GGCGAGCGCGAGGCTGATTTTATCAATTGCCAAGTATGGCGTAAAGCGGCCGAAA 29209 ||| | || || ||||||||||||||||| | ||||||||| | || |||| Sbjct 16050 GGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAA 15996 >seq1464 Length=66918 Score = 82.4 bits (90), Expect = 2e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 29035 ATGAATAAAGTCATTTTAGTTGGACGTTTAACAAAAGACCCGGAATTACGTTACACACAA 29094 || ||||| || | ||||||||||| | |||||||| || || ||||| || ||| | Sbjct 17857 ATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACATCA 17916 Query 29095 AGCGGGGTGGCGGTTGCGACCTTTACATTGGCGGTCAACCGCCGCTTTACAAACCAACAA 29154 || || || || || || || || || || ||||| || ||| || | |||| | Sbjct 17917 AGTGGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAAAAC 17976 Query 29155 GGCGAGCGCGAGGCTGATTTTATCAATTGCCAAGTATGGCGTAAAGCGGCCGAAA 29209 ||| | || ||||| |||||||| ||||| | ||||| ||| | || |||| Sbjct 17977 GGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAA 18031 >seq52331 Length=217 Score = 80.6 bits (88), Expect = 7e-11 Identities = 104/144 (72%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 29035 ATGAATAAAGTCATTTTAGTTGGACGTTTAACAAAAGACCCGGAATTACGTTACACACAA 29094 || || || || | ||| || |||||||||||||||||||| || || || || || | Sbjct 188 ATTAACAATGTAACTTTGGTAGGACGTTTAACAAAAGACCCTGATTTGCGCTATACGTCA 129 Query 29095 AGCGGGGTGGCGGTTGCGACCTTTACATTGGCGGTCAACCGCCGCTTTACAAACCAACAA 29154 || || |||||| || |||||||| || ||||| || | ||||| ||||| | Sbjct 128 AGTGGCAAGGCGGTAGCAGGTTTTACATTAGCAGTCAATCGAAGATTTACGAACCAGGCA 69 Query 29155 GGCGAGCGCGAGGCTGATTTTATC 29178 || |||| ||||| || | |||| Sbjct 68 GGACAGCGTGAGGCGGACTATATC 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124690512184320