Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_023612.1
Length=39078
Score E
Sequences producing significant alignments: (Bits) Value
seq1539 100 7e-17
seq1464 82.4 2e-11
seq52331 80.6 7e-11
>seq1539
Length=57711
Score = 100 bits (110), Expect = 7e-17
Identities = 127/175 (73%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 29035 ATGAATAAAGTCATTTTAGTTGGACGTTTAACAAAAGACCCGGAATTACGTTACACACAA 29094
|| ||||| || | |||||| ||||| ||||| ||||| || || |||||||| || |
Sbjct 16170 ATCAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCCCGATTTACGTTATACCGCA 16111
Query 29095 AGCGGGGTGGCGGTTGCGACCTTTACATTGGCGGTCAACCGCCGCTTTACAAACCAACAA 29154
|| || || || || || ||||| || || || || ||| ||||| || ||| |
Sbjct 16110 AGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAAC 16051
Query 29155 GGCGAGCGCGAGGCTGATTTTATCAATTGCCAAGTATGGCGTAAAGCGGCCGAAA 29209
||| | || || ||||||||||||||||| | ||||||||| | || ||||
Sbjct 16050 GGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAA 15996
>seq1464
Length=66918
Score = 82.4 bits (90), Expect = 2e-11
Identities = 123/175 (70%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 29035 ATGAATAAAGTCATTTTAGTTGGACGTTTAACAAAAGACCCGGAATTACGTTACACACAA 29094
|| ||||| || | ||||||||||| | |||||||| || || ||||| || ||| |
Sbjct 17857 ATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACATCA 17916
Query 29095 AGCGGGGTGGCGGTTGCGACCTTTACATTGGCGGTCAACCGCCGCTTTACAAACCAACAA 29154
|| || || || || || || || || || ||||| || ||| || | |||| |
Sbjct 17917 AGTGGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAAAAC 17976
Query 29155 GGCGAGCGCGAGGCTGATTTTATCAATTGCCAAGTATGGCGTAAAGCGGCCGAAA 29209
||| | || ||||| |||||||| ||||| | ||||| ||| | || ||||
Sbjct 17977 GGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAA 18031
>seq52331
Length=217
Score = 80.6 bits (88), Expect = 7e-11
Identities = 104/144 (72%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 29035 ATGAATAAAGTCATTTTAGTTGGACGTTTAACAAAAGACCCGGAATTACGTTACACACAA 29094
|| || || || | ||| || |||||||||||||||||||| || || || || || |
Sbjct 188 ATTAACAATGTAACTTTGGTAGGACGTTTAACAAAAGACCCTGATTTGCGCTATACGTCA 129
Query 29095 AGCGGGGTGGCGGTTGCGACCTTTACATTGGCGGTCAACCGCCGCTTTACAAACCAACAA 29154
|| || |||||| || |||||||| || ||||| || | ||||| ||||| |
Sbjct 128 AGTGGCAAGGCGGTAGCAGGTTTTACATTAGCAGTCAATCGAAGATTTACGAACCAGGCA 69
Query 29155 GGCGAGCGCGAGGCTGATTTTATC 29178
|| |||| ||||| || | ||||
Sbjct 68 GGACAGCGTGAGGCGGACTATATC 45
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124690512184320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |