Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq1361 161 1e-34 seq2007 86.0 9e-12 >seq1361 Length=62553 Score = 161 bits (178), Expect = 1e-34 Identities = 328/484 (68%), Gaps = 10/484 (2%) Strand=Plus/Minus Query 28123 GCGATTCGCGGCAAGTTCAGAGTGACCACACCCAAGTTGTTACGGCCTTCATGAACTTCA 28182 ||||| ||||||||||||| || |||||||| | || | | || ||| ||||| Sbjct 32964 GCGATCCGCGGCAAGTTCAACGTAACCACACCTAGATTCATTCTTCCGACATTCACTTCT 32905 Query 28183 ACACCGTTTTCGTCTTCCCAGCGATGCAAGAAACTACGGCATCCCATTGGGAATTTGAAA 28242 ||||||| ||||||| ||| | || ||||| || || |||||||| | |||||| Sbjct 32904 TCACCGTTCTCGTCTTTCCAACCTTGTAAGAAGGAGCGACAGCCCATTGGTACTTTGAAG 32845 Query 28243 CTACCAGTCACTTCAACGATCTTATCATAGCTCAGAATGTCCGGATACATACGTTTCGCA 28302 || || |||| |||||||||||| ||||| | ||||| || || ||||| | ||| | Sbjct 32844 CTTCCTGTCAATTCAACGATCTTGTCATAATTTAGAATATCTGGGTACATTCTTTTTGTG 32785 Query 28303 GCGCATTCCAGAGCCAACTGTTTGATACGATACAGCGGATCAGTCGGGTTCAAGTTGTGT 28362 || ||||| | || || |||||||| ||| |||||||| || || | ||| | Sbjct 32784 GCACATTCTAAGGCTAATTGTTTGATGTCATAGTTTGGATCAGTTGGTTTAAGATTGATT 32725 Query 28363 CCGTCTTTCAGAGCGAATACCAGTTTCGGGAAAACAGGGGTGATACCCTCTTTACCAAGA 28422 |||||||| || | |||| || ||| ||||| | | || ||| | || | Sbjct 32724 CCGTCTTTTAGTGTAAATATCAATTTTGGGAAGATCGCTGTCCGTTTCTCACTGCCTAAT 32665 Query 28423 CCAGCCAAACGAACTTTCAGGATTGCTTCTTGAATCAGTTCTGACTC---CCAGCTAGTA 28479 ||| | || | || | || |||| ||| || |||| || ||| | || Sbjct 32664 CCATTGATTCGGATTTGTAAAATCGCTTTTTGGAT---TTCTCGTTCAAACCAATTTTTA 32608 Query 28480 CCAAGACCAAAGCCGAAGGTACAGAACGGAGTTTGACCATTTGCGGAGTGCAGAGTG--T 28537 || ||||| ||||||| | | || || ||||| || || | |||| | |||| | Sbjct 32607 CCTAGACCGAAGCCGAGTGAAGTAAAAGGCGTTTGTCCGTT--GGAAGTGAAAAGTGTAT 32550 Query 28538 TGACCTCATACTCCAGACCTTGCATAGCATCATATACAGCTTTGCGAGTCTTTGCAATAG 28597 ||| |||||| |||| || |||||| |||||| | | | |||| || ||||| | | Sbjct 32549 TGATCTCATATTCCAAACTTTGCATGGCATCAAAAATATCTTTTTTGGTTTTTGCTTTTG 32490 Query 28598 CATA 28601 |||| Sbjct 32489 CATA 32486 >seq2007 Length=108395 Score = 86.0 bits (94), Expect = 9e-12 Identities = 73/88 (83%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 93930 AGCTAAAAATGCGGGGGTAACTGGGCTCGAACCAGTGCATGACGGAATCAAAGTCCGTTG 93989 || |||||| | |||||| |||| |||||||| |||||| ||| ||||||||| ||| Sbjct 1284 AGATAAAAA--CTGGGGTAGCTGGATTCGAACCAACGCATGAGGGAGTCAAAGTCCCTTG 1227 Query 93990 CCTTACCAACTTGGCTATACCCCTATAA 94017 ||||||| |||||||||||||| |||| Sbjct 1226 CCTTACCG-CTTGGCTATACCCCAATAA 1200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708869871794240