Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_024212.1 Length=55726 Score E Sequences producing significant alignments: (Bits) Value seq640 430 5e-116 >seq640 Length=68089 Score = 430 bits (476), Expect = 5e-116 Identities = 1229/1869 (66%), Gaps = 108/1869 (6%) Strand=Plus/Minus Query 6793 TAACGACCCTACCGTAATCCTATCTACGCTTGTATCAGAGGCCGATAGAGTA-ATTTACG 6851 ||| |||||||||||||| |||| | ||||| | | ||| | || | ||||| | Sbjct 58591 TAATGACCCTACCGTAATTATATCGGCTCTTGTCAATAATGACGAGA-AGAAGATTTATG 58533 Query 6852 TATTCGACGAGTTTGTTAAAACTGGTATGATAGCTCCTGAGATATTTGATGTTATTAAGC 6911 |||| |||||||| ||| || || ||| | | |||| | || || ||||| Sbjct 58532 TATTTGACGAGTTCTATAAGACCGGCATGTTTAACCGGCAGATTTACGAAGTCCTTAAGA 58473 Query 6912 GTAAGAAGCTTACTCACC-AGCTTATCTACGCCGACTCTGCTAACCTTGAAACCATTGAG 6970 |||||||| ||| | | | || | || ||||| ||| | | || ||| ||| Sbjct 58472 AGAAGAAGCT-ACTAGGCTACCACATGTTTGCTGACTCAGCTGCTCCTAAAGACATAGAG 58414 Query 6971 CAGATTAAACGCCTAGGCGCACGTAAGATTAAGCCTGTTAAGAAAGGTCGTAACACAGTC 7030 | || ||||| ||||| |||||| | |||| |||| |||||| || | | | Sbjct 58413 GAAATAAAACGTCTAGGGGCACGTTACCTTAAACCTGCTAAGAAGGGCAAGGATTCTATT 58354 Query 7031 CTTCATGGAATCCAGTATTTACAAGGATATACAATCTACGTTCATCCTCGCTGTCAGAAT 7090 || || || || | |||||||| | || || || | || || ||| || || Sbjct 58353 AACCACGGTATTCAATTCTTACAAGGTTTTAAGATTATTGTAGACCCCCGTTGTAAGCAT 58294 Query 7091 ACTATCAAAGAGCTTGAGAACTACGAATGGAAACCTTCTAAAGGCTCTGACGATTACGAG 7150 ||||| ||||| |||||||||| | ||||| |||||| || | || || ||| Sbjct 58293 ACTATAGAAGAGTTTGAGAACTATGGTTGGAAGAAGATTAAAGGAACTAATGAGTATGAG 58234 Query 7151 AACGTTCCTAAGCAAAATGGATTCGACCACTGTATGGACGCCTTGAGGTATGCCGTAAAT 7210 ||| || | | || || ||||||| | || ||| | || || || || Sbjct 58233 AACAAACCAATCGATAAC---TTTAACCACTGCTTAGATGCCCTTAGATACGCTGTGTCA 58177 Query 7211 GACCTTATTCCACGTAACAAGATTAGAACAATCAACAAGTCGGTGCTAGGGCTTTAAGAC 7270 ||| | || ||||| |||| | ||||||||||| ||||| |||| || Sbjct 58176 GACATGATACCACGGAACACTGTAAGAACAATCAATAAGTCCTTGCTGGG---------- 58127 Query 7271 GCCTTAGTACCCTCTTGGGTACAATTATCAGCTAAAACTAAGGAGGATTCAATATGGCAA 7330 |||| ||||||||| | ||||||| Sbjct 58126 --CTTA--------------------------------TAAGGAGGAACTTAAATGGCAA 58101 Query 7331 TCCCTAACGGACAAATTAATGCTGGCGACATTATCACTACTAACATCCGCCGTAAACACT 7390 | ||||||||||||||||| | ||||| | ||||| || || | || || Sbjct 58100 TACCTAACGGACAAATTAACCCCGGCGATTTAATCACCACAAATGAAAAGAGGAAGTACC 58041 Query 7391 TCATTAGACGAAACTATGATATTCGAGAGCTTATCACACTAGCTGAAATGCACTCT---- 7446 || || || ||| ||| || || | ||| | || || || | |||| | Sbjct 58040 ATATCCGAAGAGACTTTGAACTTGAGGATTTAATCTCCCTTGCAGACAACCACTTTAATA 57981 Query 7447 CGCTCTTCTAGCGCTTATGGAGTTTTATATGATTATTATAAAGGCAATCACATTGCTATT 7506 || ||| ||| | |||| |||||||||| || |||||||| ||||| ||||||||| Sbjct 57980 CG-TCTGCTAAC---TATGACCTTTTATATGACTACTATAAAGGTAATCATATTGCTATT 57925 Query 7507 CAATCACGTACA-TTTGACGACACTAATAAACCTAACTCAAAAATCGTTCATAACTTCCC 7565 || ||| ||| |||||||||||||| ||||||||| || | ||||| |||||||| Sbjct 57924 CAGCAACG-ACACTTTGACGACACTAACAAACCTAACAGTAAGGTGGTTCACAACTTCCC 57866 Query 7566 TAAACTATTGGTAGACACTTCCACTGCTTACTTAGCAGGTGAGCCTATCACAGAATCTGG 7625 |||||| |||| || || || || || | || |||||||||||||| | || || Sbjct 57865 TAAACTGGTGGTGGATACATCTGTGGCATATCTTGCTGGTGAGCCTATCACTTATTCCGG 57806 Query 7626 GGACGAGAAAACTATCAAAGCAATGCAACCAGTCTTTAAAGAGAACTATGTTACAGACGT 7685 |||||| ||||||||||||| ||| |||| |||| || |||| | || ||| | Sbjct 57805 AGACGAGGAAACTATCAAAGCGATGGAACCTATCTTCCGTGAAAACTTTATTGATGACCT 57746 Query 7686 TAACTCAGAGGAAGTTAAGCTTTCAGGAATCTTTGGGCACTGCTTTGAAATCCATTGGAT 7745 |||| | ||||||| ||| | |||| |||||||| |||||| |||| | ||||| Sbjct 57745 TAACACTGAGGAAGCTAAATTCTCAGCTATCTTTGGACACTGCATTGAGTTAGCGTGGAT 57686 Query 7746 TGACCGTAACAAGAAACATCGCTTTAAAGCTGTGTCACCAATGAACTGTCTAATTGCTTA 7805 |||||| ||| |||| || ||||||| ||||| || | ||||||| | || ||||| Sbjct 57685 TGACCGCAACGGTAAACTCCGTTTTAAAGTAGTGTCTCCTAAGAACTGTTTCATCGCTTA 57626 Query 7806 TTCAGCAGACTTGGATGAAGAGCCTAT-TGCAGCTATTTACTACAACACTGTAATCAGTG 7864 |||| ||||| ||||| ||||| | ||| || |||| ||||| | ||| Sbjct 57625 TTCAATGGACTTAGATGAGGAGCCATTGTGC-GCCGTTTATTACAA--------TGAGTT 57575 Query 7865 ACATCACAGGCCATCAAATCAGAACTTATGAAGTCTACACGGAAGAC-CTAATC-TATAA 7922 ||| || | || || | | ||| | || ||| || | | || | || || Sbjct 57574 ACAAAGCATGG-ATGAATTTACTACTACTCGTGTATACGAGGTATTCACTGCTGATAAAA 57516 Query 7923 AT-TCTCA------ACAGACGATGAGAGAGAAGTTTACAGAGAGATTCCAGAAGAGCTTG 7975 | |||| ||||| | || || || || ||| | | | || | Sbjct 57515 AGCTCTCTTTTAGTACAGA-GTCGAAAGCAAACCCTA-AGACCCAAGCTCGT-GATACTA 57459 Query 7976 AGATTAAGGACTATGAAGTACATCCTAACTTGCTTCAGAAATTCCCTG--TACTAGAAAT 8033 ||||||| | | || | | |||||| | ||| | | ||||||| ||| ||| | Sbjct 57458 AGATTAAAGGTTTCAGAGAAGACCCTAACGTCCTTAAAATCTTCCCTGCTTAC--GAATT 57401 Query 8034 CATTGCAAACGAAGAACGCCTAGGTGACTTCGAGGCTCAACTATCTTTAATCGACGCTTA 8093 | || || |||||||| || |||||||| |||||||||||| |||||| || || || Sbjct 57400 GTTAGCTAATGAAGAACGTCTCGGTGACTTTGAGGCTCAACTAGGTTTAATTGATGCCTA 57341 Query 8094 CAACTTAGCTGTATCAGATAGTGTTAACGACATCGCTTATTGGAATGACGCTTACTTATG 8153 |||||| | || |||||||| |||||||||||||| || ||||| || || |||||||| Sbjct 57340 TAACTTATCCGTCTCAGATAGCGTTAACGACATCGCCTACTGGAACGATGCCTACTTATG 57281 Query 8154 GTTACAAGGCTTTGACCTAAGCGCTGATAGTGACTCTATTAGTAACATGAAGAACGACCG 8213 | ||||||| |||||||| | ||| |||| ||| | |||||||||||||||||| Sbjct 57280 GCTACAAGGATTTGACCTTTCAGAAGATGGTGAGTCTGTAGCTAACATGAAGAACGACCG 57221 Query 8214 TGTAATCGTAACGGATGAAGACGGCATGGTTAAATTCATTACTAAGGATGTTAACGACAA 8273 |||||| || || || || | || | ||||| || || || ||||| | |||||||| Sbjct 57220 TGTAATTGTTACTGACGAGGCTGGTAACGTTAAGTTTATCACCAAGGACATCAACGACAA 57161 Query 8274 GCATATCGAAAACATTAAGAACCGTGCTAAGCTAG-ACATCTTTAGCCTATCACAAACAC 8332 ||| | || ||||||||||||||||| | | || |||||||||| || || ||||| | Sbjct 57160 GCACGTTGAGAACATTAAGAACCGTGC-ACGTGAGGACATCTTTAGTCTTTCGCAAACGC 57102 Query 8333 CTGACTTGGTATCTAAAGACTTCACAGCAGCTTCAGGACAAGCTTTGAAAGCAGCTACCC 8392 ||||| | | || || | || | || ||||| || ||| ||| ||| | | Sbjct 57101 CTGACCTAGCCTCCGAACAGTTTGCTGCTGCTTCTGGTGTGGCTATGAGAGCTAAATCAC 57042 Query 8393 AACCACTAGAGAACAAGTCCGCTGTTAAGGAATCTAAGTTCCGTAAAGTCTTAGCTA-AG 8451 | || || ||||| ||| | || | || ||| ||||| || | | || | | Sbjct 57041 AGCCTCTTGAGAATAAGACGGCGATGAAAGAAAGCAAGTTTAAGAAGATGAT-GCAACAC 56983 Query 8452 CGTTACGAGTTGGTGTGTAGC----TACCTTGAGTTTATGAACAAAGCTAAAGACTTGAA 8507 || | | |||| ||||| |||||| | || ||| | |||| | | |||| Sbjct 56982 CGATTC---ATGGT-CGTAGCGGCTTACCTTAAAGCTAAGAAAGAGCCTAATGCCGTGAA 56927 Query 8508 GCCTTA-------TGAAGTTACTCCAGTATTCGTTCGTAACCTACCTCAATCATACGCTG 8560 ||||| || || |||||||| || |||||| |||| || || ||||||| Sbjct 56926 -CCTTAAACCGCTAGATGTAGAGCCAGTATTTGTACGTAACTTACCACAGTCTTACGCTG 56868 Query 8561 AGTTAGCAGACATGGCCGTTAAGCTTCGTGACATGCTTCCTGACGAAACTATCATTAATC 8620 || | || |||||||| ||||| | |||| | |||| ||||||||| | | Sbjct 56867 AGCTTGCTGACATGGCTGTTAAATTGAAAGACACAATGTCTGATGAAACTATCTTAGCAC 56808 Query 8621 AGTTCCCAT 8629 | ||||||| Sbjct 56807 AATTCCCAT 56799 Score = 334 bits (370), Expect = 3e-87 Identities = 498/698 (71%), Gaps = 14/698 (2%) Strand=Plus/Minus Query 5084 ACTAAACGAACCTTTAACGAAGCTTACTTACCATACATGTATAATCAGCCTGAAGGACAG 5143 ||||||||| ||||||||||| ||| | || ||||||||||| || || || Sbjct 59361 ACTAAACGATTCTTTAACGAAGTTTATATGAAGTATATGTATAATCAACCGCTTGGGCAA 59302 Query 5144 CACCGTACAATGGTCTTCTATGGAGGCGCTGGTTCAGGTAAGTCTAAGTTCGTTGTTCAG 5203 | |||| ||||||||||| ||||| |||||||| ||||| |||||||| || || ||| Sbjct 59301 AAGCGTATCATGGTCTTCTACGGAGGGGCTGGTTCTGGTAAATCTAAGTTTGTAGTGCAG 59242 Query 5204 AACGCTATCTTAAAAGG-CTTGTCAGAACGCCGTAAGTTCCTAGTCTTGCGTAAGGTAGA 5262 ||||| |||||||||| ||| | ||| | || ||||||||||||| ||||| || || Sbjct 59241 AACGCCCTCTTAAAAGGGCTTAGC-GAAAGGCGCAAGTTCCTAGTCTGTCGTAAAGTGGA 59183 Query 5263 TAATACTATTCGTGACTCCATCTTCCAAGAGTTTCTAGTCTGCTT-AGAGGAATGGAATC 5321 ||| || || |||||||| |||||| |||||| || | || ||| || ||| Sbjct 59182 TAACACAATCCGTGACTCTATCTTCGCCGAGTTTGTACAAGGTTTGAGA-GAGCTTAATA 59124 Query 5322 TCTTAGACTTTTGCGAGGTCAAG----GCTTCTTATATGACCATCAAGCTGCCTAACAAA 5377 | | ||| | || || || ||| ||| || |||| || | ||| |||||| | Sbjct 59123 TATATGACATCTGTGACGTTAAGAACAGCTACT----TGACGATTACGCTTCCTAACGGA 59068 Query 5378 ACAGAGTACATCTTCAAAGGTTTAGAAGACCCTGAGCGAATAAAGTCCATCCAAGGTCTT 5437 || || |||||||| |||||| | |||||||| ||||| || || |||||||||||| | Sbjct 59067 ACTGAATACATCTTTAAAGGTCTTGAAGACCCAGAGCGTATCAAATCCATCCAAGGTATC 59008 Query 5438 ACAGACATTATTATGGAGGAAGCCACAGAGTTTACACGAGAGGATTACGACCAACTTCAA 5497 |||| || || ||||||||||| |||||||||||| || || ||| || ||| | Sbjct 59007 TCAGATATCATAATGGAGGAAGCAACAGAGTTTACAGTGGATGACTACTCACAGCTTAAC 58948 Query 5498 ACACGTCTCCGCCACCCTAC-AGCAAGACATCAACAAGTGTTTGTAATGTATAACCCTGC 5556 ||||||||| || | | ||||| || | ||| | | ||||| |||||||| Sbjct 58947 TTACGTCTCCGTAACAAAGCTATCAAGA-ATAACCAAATCACACTCATGTACAACCCTGC 58889 Query 5557 CTCTAAGGACAACTGGGTTTACCAATATTTCCATAACCCTGCTACTAAGCGGCCTAAAGG 5616 ||||| | ||||||||| || | ||||| ||||| | || ||||| Sbjct 58888 TTCTAAAGCCAACTGGGTGTATGGAATGTTCCACGACCCTAAGAAACCTCGACCTAAGAA 58829 Query 5617 CTCTAAGGTAGTATGTACAACCTACAAGGATAACCGATTCCTTCCTAAAGCTTACCTTGA 5676 || | | || || ||| || || || || || || ||| | | | | ||||| || Sbjct 58828 CTGTCAAGTGGTTCATACGACTTATAAAGACAATCGTTTCTTATCACAGGACTACCTAGA 58769 Query 5677 CCATCTACAAGACTTGAAGAACACTAACCCAGTCTATTACGAAATCTATGCACTAGGTAA 5736 | | ||||| ||| ||||||||||||||| || || ||||||||||||||||| || Sbjct 58768 GAACTTGAAAGACATGATGAACACTAACCCAGTTTACTATGAAATCTATGCACTAGGCAA 58709 Query 5737 GTTCGCCAGCTTAGGTAAACGTATTTACACAAACTGGA 5774 |||||| ||| | |||||| | ||||| ||||||| Sbjct 58708 GTTCGCAAGCCTTGGTAAAATGGTGTACACGAACTGGA 58671 Score = 302 bits (334), Expect = 2e-77 Identities = 561/813 (69%), Gaps = 14/813 (2%) Strand=Plus/Minus Query 15414 AAACAAGTACAGATTATTGCAGGCGGTACACAAGCTGACATGGACATGCTTGGTGACACA 15473 ||||| || || || || || || |||||| | || |||||| | | ||| |||| || Sbjct 49021 AAACAGGTTCAAATAATCGCCGGTGGTACAGATGCCGACATGAAACTTCTTAGTGAAACG 48962 Query 15474 GCTATCGAAATCGGTGGTAAGACTTCTAAGGGCGCTCAAGAAGTTGCTGAGGCCATGGTG 15533 || || | | |||| || || |||| || || ||||| || || | ||| | || Sbjct 48961 GCAATAAAGCTTGGTGCCAACACCTCTATTGGTGCCCAAGAGGTAGCCAATGCCGAGATG 48902 Query 15534 GACTTTGCTAAGCTAGGTTTTACAGCTAAGGAAACTTCAGAGGCTATGAAAGGTATCGTA 15593 || ||||||||| |||||||||| ||| |||||| | | ||||||| ||| || || Sbjct 48901 GAGTTTGCTAAGTTAGGTTTTACGGCTTCTGAAACTGCCCAAGCTATGACAGGGATTGTG 48842 Query 15594 TATGCTGCTGAAGCTTCTGGCTCAGGCGTACAAGAGACTGCTGGAATCGTAGCCACAGCA 15653 ||||| ||||| |||||||| ||| | || || || || ||||| | || Sbjct 48841 TATGCCGCTGAGGCTTCTGGTTCATCAATGGAAACTACCTCTAATATTGTAGCGGCTGCT 48782 Query 15654 CTTAACGTATGGAATATGGAAGCCTCTAAAGCCGAACACGTTGCTGACGTATTGGCTAAG 15713 | || ||||| | | || | |||| |||||||| || || ||| |||||| | Sbjct 48781 TTAAATACTTGGAACTTAGGTGCGACAGAAGCTGAACACGTAGCCGATGTACTGGCTATG 48722 Query 15714 ACTGCTAACGAAACAGCCGCAGACATGCAGGACATGGGATA--CGTTCTACAGTACGCTG 15771 ||| | || | ||||| || || ||| ||| | ||||| | ||| || || || | Sbjct 48721 ACTTCCAATAAGACAGCTGCTGATATGACAGACTTAGGATATACCTTC--CAATATGCAG 48664 Query 15772 GTTCCTCAGCTTCCCTAGCAGGAGCTTCTCTGGAAGACCTTTCAGC-TATGGCAGGTATC 15830 | | || || || | ||||||||| |||| | | | || ||| |||||||| Sbjct 48663 GGGCTTCTGCCAAACTTGGTGGAGCTTCTATGGAGCAGTTAGCCGCCTATA-CAGGTATC 48605 Query 15831 ATGGCCGATAACGGTATCAAAGGTTCTAAAGCAGGTACCTCTTTACGTACAGCATTCACA 15890 ||||| || | ||||| |||||||||||||| ||||| || ||||||||||||| || Sbjct 48604 ATGGCTGACCAAGGTATTAAAGGTTCTAAAGCTGGTACAACTCTACGTACAGCATTTACC 48545 Query 15891 AACCTAATTAATCCTACAGACGGTGCGGCCGCTGCTATGGAAAGCTTAGGAGTACAGTTT 15950 ||| ||| | |||||| ||| || ||||| ||| | || ||| ||| || || || Sbjct 48544 AACTTAACTGCTCCTACTGACAAAGCCGCCGCCGCTTTAGACTCCTTGGGAATA-AGCTT 48486 Query 15951 A-AAGACGCTGAAGGAAAAGCACGCCCTACGATGGATGTTATCTACGACTTACAAGACGC 16009 | |||| || || || || || | |||| || |||||| | || |||||||| || Sbjct 48485 AGAAGATGCAGACGGTAAGGCTAGACCTATTCCGGCTGTTATTGAGGATTTACAAGATGC 48426 Query 16010 TGTTAAAGGCATGGATGATATTCAAATCCAAGAGCTTTCAACAATCCTATTCGGGAAGCC 16069 | | | | ||| | || | ||| |||||||| | || || || ||| | Sbjct 48425 CACTCAGAACCTTTCTGACTCAGAGATACTAGACCTTTCAACTAAACTCTTTGGTAAGAC 48366 Query 16070 CGGTGCGGCTGGTATGTCGTTCGTCCTTAAATCAACTAAAGAGCAAGTACAAGA---CTT 16126 ||||||||||||||||| | || | ||| ||| ||||| || |||||| ||| Sbjct 48365 TGGTGCGGCTGGTATGTCTATGGTATTAAAACGAACAAAAGAAGAA--ACAAGAGACCTT 48308 Query 16127 ATCAAAAGCTTTGGTAGACTCTACTGGTACAGCTGCTAAACAAGCTGCCGAAATGCGTGA 16186 | | || | ||||| |||| ||||||||||||||| |||| ||| | | |||||||| Sbjct 48307 A-CTAACGAATTGGTGAACTCCACTGGTACAGCTGCTGAACAGGCTTCTAAGATGCGTGA 48249 Query 16187 GACTATGGCTGGTCAGTTAGACCAACTAGGAGA 16219 ||| ||||||| ||||||||||| |||| || Sbjct 48248 GACATTGGCTGGACAGTTAGACCAGATAGGTGA 48216 Score = 239 bits (264), Expect = 2e-58 Identities = 588/883 (67%), Gaps = 13/883 (1%) Strand=Plus/Minus Query 34176 GAATGGTATCTACAGGAGTTCTACGACCGCAAGGAAGGTAAGTCTGTTAAGTTCTGGAAC 34235 || |||||| || |||| ||| ||||| || ||||| || ||||||| |||||| Sbjct 24417 GAGTGGTATGCACCAGAGTACTATGACCGTAAAGAAGGCAACATCATTAAGTTTTGGAAC 24358 Query 34236 AGCCACTTCAAGTCTCTAACAGAGCTTATTGGTGGAGGCTATCAATCAGGAAACCTTTAC 34295 ||||||||||| || |||||| | || || || || ||| || || | ||| Sbjct 24357 AGCCACTTCAAAGGGTTAGACGAGCTTTTAGGGGGCGGTTACCAAGGCGGTAATATGTAC 24298 Query 34296 ACGATATTCGGTAGAAGTGGTCGAGGAAAGTCTACTGTAATGCTAGTTGAAGCATTAGAA 34355 || || | | ||||||| || || || |||| |||| | || ||||| || | Sbjct 24297 ACATGGTTTGCTCGAAGTGGGCGTGGTAAATCTATCGTAACCATGGTAGAAGCCTTGTCA 24238 Query 34356 GCAGCTATGAATGGGGCTAATGTTCTTTACTACTGTTTAGAAATGCCTAAGTATGAGTTT 34415 || || ||| | |||||||| || ||| | || || |||||||| ||||||| Sbjct 24237 GCGGCGATGCAAGGGGCTAACGTCCTTATGTGGGTATTGGAGATGCCTAAATATGAGTGG 24178 Query 34416 ACATCAAGAGCAGTAAGCTTCTTATCAGCTCGTAAAGAGGTTAAGAAAAGCCGAATCA-- 34473 | ||| | || | ||| | || || | | |||||||| | || | ||| Sbjct 24177 GCTTCACGTGCCTTTGCATTCCTTTCTGCACAGGATGAGGTTAA---ACGCTCAGTCATT 24121 Query 34474 -ATGGCTCAGATTATCTAGCAGGATTTAATATATCCGACATCACAAAGGCTTCATTTGAA 34532 |||| || || ||| ||| | |||| || || | || |||| | || || | Sbjct 24120 GATGGTGTGGACTACTTAGGAGGCTATAATGTACAAGAGCTTACCAAGGGT-CAGTT--A 24064 Query 34533 GACTTAAACGAAGAACAAGATTTCGTTGACTTTGTTACCAACT-TAAATGATTTCATAGA 34591 |||| ||||||||||||| || | | ||| || | | | | ||||| ||| Sbjct 24063 GACTACCACGAAGAACAAGACTTTATGAAGTTTATT-CAATCGCTGAATGACCGCATCTC 24005 Query 34592 AGGTTCATTTACACTAAGAGCAGTAGACGATGACGACTTTGTTAACCGCTCTGTTACCCA 34651 ||| ||| |||| | | ||| ||||| ||||| ||||||||||| || || | || Sbjct 24004 AGGGTCAGTTACCATTAAAGCGGTAGATGATGAAGACTTTGTTAAGCGTGACGTAAGACA 23945 Query 34652 ACTTGAACGCGATATTGTAGAAACAGGAGCAGACTTTGTTGTAGTAGACCCTATGTATTA 34711 | ||||| || |||||||| || | ||| || | || | || ||||| | || || Sbjct 23944 GTTAGAACGAGACATTGTAGAGACTGATGCAAACGTAGTAATCGTTGACCCATTCTACTA 23885 Query 34712 CATGCACTACGAGAAGAACACTTCTAAAACAGCAGGTGGAGACGCAGCAGAAACTTCTAA 34771 |||| |||| |||||||| ||| | ||||| |||||||| || || | || ||||| Sbjct 23884 CATGAGCTACTCTAAGAACACCTCTCAGACAGCCGGTGGAGATGCTGCCAACACCTCTAA 23825 Query 34772 AGCATTAAGAAGACTAGCGGGCCGTACAAAGTCTGTAATTATCGCTGTAACACAGGCTGA 34831 || ||| || |||| || || ||||||||| ||| | | | | ||||||||||| Sbjct 23824 AGAGTTACGAGGACTTGCAGGTCGTACAAAGGTGGTACTACATGTTATCACACAGGCTGA 23765 Query 34832 GGAAGACTCCAATGAAAAAGGCGGAGACGAGCGTGAACTAAACATTCCAAAACGTTCCAA 34891 |||||| | || || || | || ||||| | || | ||| || | | Sbjct 23764 TGAAGACAGTACCGAGAAGCAGGGCAATGAACGTGAGTTGAAATTGCCATCCCGAAGCGA 23705 Query 34892 TGTTAAGAAGACAATGGCGTTACTTGAAGACGCTTCTGTAGTATTAGCTTTTGATAGCTG 34951 ||||||||||| | | | | || ||||| |||||| | |||||||||||||| || Sbjct 23704 AGTTAAGAAGACTAAGCAGGTGCTAGAAGATGCTTCTTATCTTTTAGCTTTTGATAGTTG 23645 Query 34952 CGATGGAAGATTTGCTTTAGAGATTGTTAAAGGACGTTCAGGACATGAAGGAGAAAGCGT 35011 || || | ||||| ||| || ||||| |||||||| |||||||| ||| || Sbjct 23644 TGACGGGCGCTTTGCACTAGGTGTTAAGAAAGGTCGTTCAGGTGGTGAAGGAG-AAGAGT 23586 Query 35012 TG-AAGGTATCTTCCTACCAGTAATTGGGTATGTTGAAGAGTC 35053 || || || ||||||||| ||||| || || ||||||| Sbjct 23585 TGTCCGGCATTTTCCTACCATCTATTGGCTACATTAAAGAGTC 23543 Score = 221 bits (244), Expect = 4e-53 Identities = 265/360 (74%), Gaps = 0/360 (0%) Strand=Plus/Minus Query 13622 TAAAGTAGCAGCACAACGAGGCGGTACATTAAACCGTACAGCGGCAACGTTAGACGTATC 13681 ||||||||| || |||||||| || |||||||||||| |||| | || || || | || Sbjct 52051 TAAAGTAGCGGCTCAACGAGGTGGAACATTAAACCGTTCAGCAGACACCTTGGATGCTTC 51992 Query 13682 TAACAAAGAAGGTTTCGGATGGGACGACGCCGAAGCTGGTAACAAGTCTTGGTCAATCGA 13741 | ||||| | || ||||||| | ||||||||||| || ||||||||| | || Sbjct 51991 TTCTAAAGAGGATTATGGATGGGCTAATAACGAAGCTGGTATTAAATCTTGGTCATTAGA 51932 Query 13742 CTGTGATGGATTGTTCGTAGAGGACAACGCAGGTTTCCAAGCGTTGAACGCAGCTTGGGT 13801 |||||| || ||||||||||| ||||| || ||| | | | |||| ||||||||| Sbjct 51931 CTGTGACGGTTTGTTCGTAGAAAACAACAGCGGGTTCGATGTCCTTAACGTAGCTTGGGT 51872 Query 13802 AAACGGAGACTGTGTACGTGTTCGTGTTAAATTCCCTAGCGGATTAACTTACGTAGGACA 13861 ||||||||| || ||||| ||||| ||| |||||| |||||| | |||||| | Sbjct 51871 AAACGGAGATTGCGTACGAGTTCGGGTTCGCTTCCCTTCCGGATTGGTGTTCGTAGGTAA 51812 Query 13862 AGCAATCTTAACTGACTTCCCTTATGAGTTCGGTTACGAAGACGCTGTGACTTACTCATT 13921 || || | || |||||||| ||||||| || || || |||||||| |||||||| Sbjct 51811 CGCCATTATCACAGACTTCCCAATTGAGTTCCCGTATGACGATGCTGTGACATACTCATT 51752 Query 13922 AACGTTCCAAGGCAAAGGCGCTTTAGAAGAGCAGCAAGTAGCTCCTACTATCTTACCTAA 13981 || ||| |||| ||||||||||| | | | ||| | | |||||| | |||||||| Sbjct 51751 GACATTCGAAGGTAAAGGCGCTTTGGTACAAGCTCAAACAACGCCTACTGTGTTACCTAA 51692 Score = 174 bits (192), Expect = 6e-39 Identities = 243/341 (71%), Gaps = 0/341 (0%) Strand=Plus/Minus Query 36363 GATGGCATTATGATTTGGACTGACCCAGCCACTGGAGAAGAGTATCGGGTAGGCCTTGAG 36422 ||||| | ||||||| || ||||| | || || |||| | || || || |||||| Sbjct 18342 GATGGGCTCATGATTTTCACAGACCCTGAGACAGGTAAAGAACACCGTGTGGGTCTTGAG 18283 Query 36423 GTTAAGTCTAAACAAACTACTCCAGCAGCTACTAGCAAGTTCTCTATGAGACAGCCTAAC 36482 |||||||||| ||||| | | ||| ||| || ||| |||| | |||| || Sbjct 18282 ATTAAGTCTAAGCAAACCTCCTCTGCAAGAACTTCTCTGTACTCAATGAAAGAGCCGGAC 18223 Query 36483 TCAAAACACGTATGGCAGGTTAAGAACTATGCTATGTTAAAAGACTTAGACATGTATTTA 36542 || ||||||||||| ||||||||||| || |||||| | |||||||| | || ||| Sbjct 18222 AAGAAGCACGTATGGCAAGTTAAGAACTACGCCATGTTACATGACTTAGAAAGTTACTTA 18163 Query 36543 ATTGTCTATGTAAACTGCGCTCACAAGTCTTGGGAAATGACTGAAGAAGACTATGCGAAG 36602 | |||||| |||||| |||| ||| ||||||| || ||| || ||||| ||| Sbjct 18162 GTAGTCTATCTAAACTTTTCTCATAAGACTTGGGAGTATACCTCAGAGGATTATGCTAAG 18103 Query 36603 AATCCAGACTTACAAGTATTCGGTGTAGATATTACCGAACAAGATAAGAAAGACGTCCGC 36662 | || ||| ||| |||||| || | || || | ||| |||||||||||| || | Sbjct 18102 ACACCTGACGTACGAGTATTTGGCATTCATGTTTCAGAAGCAGATAAGAAAGATGTAAGA 18043 Query 36663 AATCGTTTCTTCACAGCGATTGAACATGCTCATGCAGGAAC 36703 | | |||| || ||| ||||||||||||||||||| || Sbjct 18042 GACAGGTTCTGGACGGCGGTTGAACATGCTCATGCAGGTAC 18002 Score = 154 bits (170), Expect = 5e-33 Identities = 615/939 (65%), Gaps = 52/939 (6%) Strand=Plus/Minus Query 21436 AACGGAGCTAAGTGGAAAGACTTCTGGGGCAAGGTT-TCAGTACAGCGTAGAGACAATCG 21494 |||||| |||||| | |||||| || ||| || ||| | |||||| ||||| Sbjct 43020 AACGGAAACAAGTGGGATGACTTCAAAGGTAAGTTTGTCATTG-AGCGTAAGAACAATAA 42962 Query 21495 CTGGAGACTTATCGTAGGTCAGTACAAAGACCGTAGATACAGCCCTTCTCCTGAAGCTTC 21554 |||||| | | | ||||||||||| |||||| || |||| | || || || Sbjct 42961 GTGGAGATTAACGGCAGGTCAGTACAGTAACCGTAAATTTGACCCTGCACCAGAGTCTAA 42902 Query 21555 ATTTAACTTTGGTCAAAACATGTTGAAAGATACTAGAGACA-CAGGCTGGTTCGATTTGC 21613 || ||| |||| || |||||||||||| |||| ||||| | || ||| | | | | Sbjct 42901 CTTCAACCTTGGCACAAGCATGTTGAAAGACACTA-AGACAACTGGTTGGGTAACTCTCC 42843 Query 21614 CTCCTGAAACTTGGGGTAAGAAGTTT-GCAAGGGTTGGAATCTTCTTCGGACAGTATTCA 21672 | |||| ||||||| || || | | ||| | ||||| | | ||| | | | Sbjct 42842 CAACTGAGACTTGGGATA-GACCTGTAGCACGTGTTGGGCTTTACTTGGCTACTTGGAAA 42784 Query 21673 CATCGACCTAAG-CTAGGCCACCTATCAGTACGTAGACTAATCGTGTGGGAAAACCTT-- 21729 | || || | |||| | || |||| || |||||| |||||||||||| || | Sbjct 42783 GACCGCCCACTGGCTAGTC-ACTTATCTGTTCGTAGATGTATCGTGTGGGAAGACTTGAC 42725 Query 21730 -GAGGAGTATGGGGACAAACCTTTAGAAGGGACTCCAATCATGTTCCACGAGGGAGACAC 21788 || |||| | || | || | | || || || || || || || || ||| Sbjct 42724 AGAAGAGTCT----ACTACCCCTCA--AGAGAAACCGATTATCATCAACTCAGGTGACCA 42671 Query 21789 AGTTGTAATTGACTCAAGCAAAGCTCAGACATACCTTAACGGAGAACTTACTCCATCGCT 21848 ||| || |||||||| |||| ||| ||| | || || | |||||||| | | Sbjct 42670 AGTCCTAGTTGACTCAGAGAAAGGTCAAGTTTACTTGAATGGCGTTCTTACTCCTAAGTT 42611 Query 21849 TGTAGACCCTATGACCGACTGGTTCCCAATTACCAAAGGTGATAACTACATTGGAGTAAA 21908 || ||||||||||| || |||||| | | ||||||||||||| || ||||| || Sbjct 42610 GGTTGACCCTATGACTGATTGGTTCTCTGTGGATAAAGGTGATAACTTAATCGGAGTTAA 42551 Query 21909 TAACTTCAAAGGTAAGATTGACA-TAGTATATAACGAACGATTTAAATAAGGAGGAAAAA 21967 ||||||| || | || ||| || | ||||||||||||||||||| |||||||| Sbjct 42550 TAACTTCGTTGGGGA-TTTAACAGTAATTTATAACGAACGATTTAAAT-AGGAGGAAGTT 42493 Query 21968 GTATGATTACAGTATTAAACGCA--AACGGACAGACGGTAGCACACTTTGTCAACAACGT 22025 | ||||||||| |||| | ||| || ||| | | | ||||||| | ||| | || Sbjct 42492 GAATGATTACA--ATTAGAAGCATTAATGGAGAAATTCTTACACACTTCGACAATAGTGT 42435 Query 22026 TAGCGAAGGAGTACCATACTTTGAGCCTACTTTGACGGAGAATATAGAGACGTTGGTATC 22085 | || || || ||||| || || |||| || |||| |||| ||||| || Sbjct 42434 TCCTGACGGTAATCCGTACTTCGAACCAGTGATGACAGATGATATGGAGAGCTTGGTTTC 42375 Query 22086 AACGTTCTCTTTCTCTGTTCCTTTAGACTGTGACGAAAGCCAATACCTAAAAGGCTTGAA 22145 || ||||| || |||||||| || || | || || | ||| | |||| | || Sbjct 42374 AAGCTTCTCCTTTTCTGTTCCATTGGAGTTGGAAGACACGGTTTACTTGCAAGGTCTTAA 42315 Query 22146 TAAAGTATT-AGTAAAGGATAAGGATGGAGATTTAAGGCAGTTTAACATCATCCATACAG 22204 | ||||||| | |||| || | |||| | |||| | || ||| ||| || Sbjct 42314 TCAAGTATTGACTAAA-GACCGTCAAGGAGCTCTAAGACTATT---CATTATC---AC-- 42264 Query 22205 AAGAGGTTTTCCAAGAGGTTGACT-------CTCGAATCTT---AGTGGAATGTGAAGAC 22254 ||| || | |||| | |||| | |||| | |||||| ||||| || Sbjct 42263 -AGATGTGTATGAAGA-ATGGACTACCGTTGGTGGAATGGTAAAAGTGGACTGTGAGGAT 42206 Query 22255 TTCTCTATTAGTGAGATGAACGACACTGTAATCTATCCTTTCAATGGGCACAACTT--AG 22312 | || ||| ||| ||||| || | ||||| |||||||||||| || ||| || Sbjct 42205 ATTTCCATTTCTGAAATGAATGATATCGTAATAAGTCCTTTCAATGGTATCAGCTTTCAG 42146 Query 22313 GAGACACATTAACAAAAGCCGTTCAA-GGAACTGGTTGG 22350 || |||| |||| |||| | ||||| || |||||||| Sbjct 42145 GACACAC-TTAATAAAA--CTTTCAATGGCTCTGGTTGG 42110 Score = 113 bits (124), Expect = 2e-20 Identities = 194/281 (69%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 14362 TAAAGGAGATTACAACATGATTATAAGATTCCAAGGCAAAGACCTTAACCTACGCTTAAC 14421 |||||||||| | || |||||||| ||| ||||| ||| || || | | || Sbjct 50094 TAAAGGAGATAAAAA--TGATTATACAATTTCAAGGTAAAAACAGGAATTTGAAAATGAC 50037 Query 14422 ATATAAATCAATCCACTTTCTGGAGTTAGCTTTTGACCAAGACTACGCTTCTTTCATTGC 14481 ||| | || || ||||| | || || |||||| | ||| |||||| |||||| Sbjct 50036 ATACTACTCCATTCACTTGTTAGAATTGGCTTTTCAACAACCTTACGCTAACTTCATTTT 49977 Query 14482 TGAACAAACACCTTTCAACCAGTCGTTATACATCTTCTGGGCTATGCTTCAGAACGAGGC 14541 ||||||||| ||||||||||| || || ||||||||| ||| |||||||||| Sbjct 49976 AGAACAAACAAACTTCAACCAGTCCTTGTATTGCTTCTGGGCGATGATTCAGAACGACAA 49917 Query 14542 TGATTACGAAGGTGTGTCAGTACTCGATGTGGCAGAGCTTCTTCAAGACTCTCTGGACAG 14601 || | ||||||| | || || | | | || || || | | ||||| |||| | Sbjct 49916 AGAGTTCGAAGGTTTATCGGTTCCTCAGATAGCTGACCTCTTGGACGACTCGTTGGAAAA 49857 Query 14602 TTATGAGTTCACCTTAGAGGAATACTTCGACAAAGTTAACA 14642 ||||||||| ||||| || || ||||| || ||||||| Sbjct 49856 AGGTGAGTTCACTTTAGAAGAGTATTTCGATAAGGTTAACA 49816 Score = 104 bits (114), Expect = 8e-18 Identities = 176/254 (69%), Gaps = 12/254 (5%) Strand=Plus/Minus Query 17646 GCTACCGCAGTAGGTGTCGGAACACAGTTAGGACAGGGCGGTATCAATCAGGGCG---TA 17702 ||| | ||| | ||| | || || ||| |||| || || |||||| || || | | Sbjct 46546 GCTTCTGCAATGGGTATAGGTACTCAGCTAGGTCAAGGAGGTATCTCCCAAGGTGGGGTC 46487 Query 17703 ATCCATAACGAGCGAGGAAGAGAAGTTACAATGCCTATCCAAAACGCTACTTACATGAGA 17762 ||| || || || || ||||| |||||||||||| || ||||| |||||||||||| Sbjct 46486 ATCACCAATGAACGTGGTAGAGAGGTTACAATGCCTGTCAGCAACGCCACTTACATGAGA 46427 Query 17763 CCTTTCGCAGCAGCTGTGGCCAATGAGCTTCAAGCAATGGGCGGAGGACTTGGTGGCGGA 17822 ||||||||| ||| | ||| |||| || ||| ||| ||| || ||| Sbjct 46426 CCTTTCGCAAGGGCTATTGCCGATGAACTAGGTGCA------TCAGGGCTTAGT---GGA 46376 Query 17823 GGCGTTCAAGAAGTTATCGTTCCATTGTACATTAACGATAGAGAATTTGCAAGAGCTACT 17882 || | ||| || || | |||||| | ||| | || | | |||| ||||||| |||||| Sbjct 46375 GGGGCTCAGGAGATTGTAGTTCCAGTTTACCTAAATGGTCGAGAGTTTGCAATTGCTACT 46316 Query 17883 AACAAAGCTATGAC 17896 ||||| | ||||| Sbjct 46315 AACAAGGACATGAC 46302 Score = 102 bits (112), Expect = 3e-17 Identities = 139/192 (72%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 22805 ACCCTGAGCAAGTATATCGACAAGGTGTAGAAGAGCTTTTAAAACACATTGCCCCAATCT 22864 ||||||| | ||| || ||| ||| | |||||||| ||| | | ||||||| Sbjct 41652 ACCCTGAACTAGTTTACCGAGAAGCCATTAAAGAGCTTAAAAAGTATGCGGAGCCAATCT 41593 Query 22865 ATACTTACACTGTTAATGTAATCCTTCT--AAATCGTGTCCAAGGATGGGAAGGGGAAAC 22922 ||||||||| || |||||||| ||||| ||| | | ||| |||||||| || || Sbjct 41592 ATACTTACAAGGTCAATGTAATTCTTCTTCAAAACAT--CCACGGATGGGATGGTGAGGA 41535 Query 22923 CTTAGCACTCGGTGATACAGTATGGATGAAAGAGCGTGTAGGCTCTCGTGAAATTGGTCT 22982 | | ||| ||||| ||||||||||||||||| ||||| || ||||| | ||| | Sbjct 41534 TATTGAACTAGGTGACACAGTATGGATGAAAGAACGTGTGGGAAACCGTGAGTTAGGTTT 41475 Query 22983 GGAAGCACGTGT 22994 |||||| ||||| Sbjct 41474 GGAAGCCCGTGT 41463 Score = 89.7 bits (98), Expect = 2e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 31888 ATTCACATAGACATTAGAGAATATTTAGAACAATTTGAGTGGAACCGTGCAAAGTGGACG 31947 ||||| || |||||| || ||| | |||| ||||| ||| | | |||| ||| Sbjct 27886 ATTCAGATTGACATTGCGGAGTATCTCGAACGCTTTGAATGGGAGCAAGCAAGATGGCGT 27827 Query 31948 GAAGACAGATTAATAGCTGCTTCACCGTTTCGTGACGACAATCATCCATCGTTCTTTGTA 32007 || ||| | || |||| ||| || || |||||||| || |||||| ||||||||| Sbjct 27826 GACGACCGTTTGGTAGCCCGTTCCCCATTCCGTGACGATAACTCTCCATCATTCTTTGTA 27767 Query 32008 AACTATAATAACGATTGGGCAGGTACTTTCGGAGATTCGGGAACTGGTGACTCAGGAAAT 32067 |||| ||| || || ||| |||| | || |||||| || |||||| | |||| ||| Sbjct 27766 AACTTTAACAATGAGTGGTCAGGGAGTTGGGGAGATAGTGGTACTGGTCAGACAGGTAAT 27707 Query 32068 TT 32069 || Sbjct 27706 TT 27705 Score = 84.2 bits (92), Expect = 8e-12 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 3815 AGTATTTAACGACTTCAAAAGAGCCTGACGA-ATACGAGGGAGTTGACTTAACTACATTA 3873 ||||| | || ||||| |||| ||| || | ||| || ||||||||||||||||| | Sbjct 59983 AGTATATGACTACTTCTCAAGAACCT-ACTACATATGATGGAGTTGACTTAACTACTCTT 59925 Query 3874 AAACCTAAAATGAAACGCTTTGCGAGACATTATATGCAGACTATGAAC 3921 ||||||||||||||||| ||||| || || || ||| ||| ||||| Sbjct 59924 AAACCTAAAATGAAACGTTTTGCAAGGCACTACATGTCCACTGTGAAC 59877 Score = 82.4 bits (90), Expect = 3e-11 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 33423 TGGAATCGCAAAAGATATTGCAGAAAAGACTTCACGAGAGTATTACGAAATGATGGAACT 33482 ||||||||| || ||||| || || |||| ||||||||||| |||| || Sbjct 25172 TGGAATCGCTCCGGAGATTGCCGAGGAGGCTTCCAGAGAGTATTACCGGCTGATTGACAA 25113 Query 33483 AGCTGAGTCA-GCTCCTTTAGTAGTGTTCGATGAAATAGGTAACCGAAGCGCTACCGAAG 33541 ||| | ||| || || |||||||||||||||| || || || ||||| |||| Sbjct 25112 AGCC-ACTCAAGCACCACTAGTAGTGTTCGATGACATTGGCGTTCGTTCAGCTACAGAAG 25054 Query 33542 CTTTCCGAGCAGACCTTCACGACATCATTAACAAACGAATGGTAAACAAGCTTCCATCAA 33601 ||||||| | ||| | ||| || ||||| ||||| ||||| || ||| || | Sbjct 25053 CTTTCCGTGGAGATATCCACACAATTATTAATAAACGTTTGGTAGACGGTCTTACAAGCA 24994 Query 33602 TCTTTACAAGTAACCATCCAATTG-ACTACTTGGAACAAGTGTTTGATGAACG 33653 | | ||| || | ||| |||| | || ||||| || ||||||||||||| Sbjct 24993 TTTATACCTCCAA-CTTCCCATTGAAGTATATGGAAGAATTGTTTGATGAACG 24942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177862839203904