Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_024356.1 Length=42597 Score E Sequences producing significant alignments: (Bits) Value seq640 206 7e-49 seq14859 152 1e-32 seq7607 127 6e-25 >seq640 Length=68089 Score = 206 bits (228), Expect = 7e-49 Identities = 218/286 (76%), Gaps = 1/286 (0%) Strand=Plus/Minus Query 20878 TGAATAAAATAAACTGGAAAGTTCGCTTTAGCAAAGACAACCTAACATTTATCTTGCGTT 20937 ||||||| || ||||||| ||| || |||||||| | ||| | || || |||||||||| Sbjct 36491 TGAATAATATTAACTGGAGAGTGCGTTTTAGCAAGCAGAACATCACCTTCATCTTGCGTT 36432 Query 20938 TTATTGGCGCATTAGCAGTACCTATCCTAGCGTACTTTGGTTTGAAATTTGAGGATATTA 20997 | | || || ||| ||| ||||| |||||||||||||| ||||| || ||||| || | Sbjct 36431 TCGTAGGGGCTTTATTAGTTCCTATTCTAGCGTACTTTGGCTTGAAGTTCGAGGACATCA 36372 Query 20998 CATCCTTTGATACATTATTAGATGTATTAGTTAGAGCAGTGAGCAATCCTTATGTATTAG 21057 | || |||||||| || || |||||| | | || || || ||||||||||| ||||||| Sbjct 36371 CCTCGTTTGATACGTTGTTGGATGTACTTGGTAAGGCTGTCAGCAATCCTTACGTATTAG 36312 Query 21058 GCTTAACTGTGATTAATGCATTAAACATGATTCCAGACCCAACAACTAAAGGTATTACAG 21117 | || || || || ||||| | |||||| |||| |||||||| || ||||| | || | Sbjct 36311 GTTTGACGGTAATCAATGCCCTTAACATGGTTCCTGACCCAACTACCAAAGGACTAACTG 36252 Query 21118 ATAGTGAGAAAGCATTGAACTATACAGAACCAAAGAAATAAGAAAG 21163 ||||||| ||||| | |||||||| || |||| |||||| Sbjct 36251 ATAGTGACAAAGCTCTTTCTTATACAGAGCCTCGTAAAT-AGAAAG 36207 Score = 181 bits (200), Expect = 3e-41 Identities = 222/303 (73%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 18741 CCTATGGACTAAAACAGTCTGGACTTACACAGACACATCAAGTGAAACTGGTTACTCAGT 18800 ||| |||||||| |||| ||||||||||| ||| |||| || ||||||||| || Sbjct 38900 CCTCTGGACTAAGACAGAGTGGACTTACACTGACCTTTCAACAGAGGTTGGTTACTCCGT 38841 Query 18801 TGCTAGAATTGGACAAGATGGCGCAAAAGGAAATGAGGGTATAGCTGGAAAAGATGGTGT 18860 ||||| || || ||| || || ||||| |||| ||||| ||||| || ||||| || Sbjct 38840 TGCTAAGATGGGGGCAGACGGTGCCAAAGGTGATGATGGTATTGCTGGTAAGGATGGAGT 38781 Query 18861 AGGCATTAAAACCACATTGATTGAATATGCAGTCAATACTAGTGGTACAGTCAGACCTAC 18920 ||| || | || |||||||| ||||| || | ||||| || || | || || Sbjct 38780 AGGAATCGAGGATACTTTGATTGAGTATGCTACAAACGCCAGTGGGACGGTTAAGCCCAC 38721 Query 18921 AAGCGGCTGGTCTACTACAATACCAGTTACTCCAGAAGGTCAGTACCTATGGACACGTAC 18980 ||| ||||||||| |||| || ||| |||| ||||||| ||||||||||||||| Sbjct 38720 CTCCGGTTGGTCTACTTCAATTCCGGTTGTACCAGCTGGTCAGTTCCTATGGACACGTAC 38661 Query 18981 CACATGGACGTATACAGACAATACGACTGAACAAGGTTATTCAGTAGCTAGACAAGGTAA 19040 || ||||| ||||| ||||| || || || ||||| | |||| ||| | ||||| || Sbjct 38660 TACGTGGACTTATACGGACAACACCACGGAGCAAGGCTTCACAGTGGCTCGTCAAGGAAA 38601 Query 19041 CAA 19043 ||| Sbjct 38600 CAA 38598 Score = 172 bits (190), Expect = 1e-38 Identities = 223/308 (72%), Gaps = 0/308 (0%) Strand=Plus/Minus Query 21832 AAACATCAAGGTAATGCTTGGGGTAAACTTGACTACTTTAATGGTCATGGTAAAGATCAG 21891 ||||| ||||| |||||||||||||| |||||| | | || | ||| | ||| Sbjct 35593 AAACACCAAGGAAATGCTTGGGGTAAGCTTGACAAGTACCGTGAAGAGCCTAAGGGGCAG 35534 Query 21892 ATTCGTGTGGCTGGTTGGTTAGTTCCTGATAAACCACAAGGTCCTATTGGACGATATGCA 21951 ||| | || ||||| |||||||| || |||||||| | || | ||||| | || Sbjct 35533 ATTAGAGTAGCTGGATGGTTAGTCCCCGATAAACCTAATGGAGCAATTGGTTCAACGGCT 35474 Query 21952 TATGTTATCTTCATGCAACATGGAACAAACAAAGAACTGACACGTGTTCAGTCTGCTGGT 22011 | || | |||||| |||||||||| | |||||| || ||||| || ||||| ||| Sbjct 35473 TGGGTATTGTTCATGGAACATGGAACTAGCAAAGAGCTTACACGAGTGCAGTCCCGAGGT 35414 Query 22012 ATTAAACGCCCAGATGTTAAGAAAGCATATGGCTATCAAGGTGGGCAAGAGCTTGGTTTT 22071 ||| |||||||| |||||||| || ||||| || ||||| || | | | | || ||| Sbjct 35413 ATTGCTCGCCCAGACGTTAAGAAGGCTTATGGTTACCAAGGCGGAGATGCGTTAGGCTTT 35354 Query 22072 GACGTAACAGTCAATAAGAACCAGTTCAAAGGTAAAAAAGTAGACGTGATTTTGCGTAGA 22131 |||||||| || |||||||| ||||||||||| || ||||| || || || || | Sbjct 35353 GACGTAACTGTTGGCAAGAACCAATTCAAAGGTAAGAAGGTAGATGTCATCTTACGCCGT 35294 Query 22132 GCAAATAA 22139 ||||| || Sbjct 35293 GCAAACAA 35286 >seq14859 Length=68005 Score = 152 bits (168), Expect = 1e-32 Identities = 249/354 (70%), Gaps = 6/354 (2%) Strand=Plus/Plus Query 10431 TAAAGCACTAAATGACGCCATTCTAGGCTTTGGCGGAGACGCAAACATGGCAAATAATGC 10490 ||||||| ||||| | | ||||| || ||||| || | | | |||| | || Sbjct 38784 TAAAGCATTAAATAATGGGATTCTTGGGTTTGGTGGTTCAACTGATCAAGTAAATGAAGC 38843 Query 10491 TATTGTTCAGTTATCCCAATCCTTCTCTAATGGTAAAGTAGACGCGCAAACATGGAACTC 10550 | || ||||| |||| ||| ||||| || || ||||||||||| ||||| ||||| || Sbjct 38844 TGTTATTCAGCTATCTCAAAGTTTCTCAAACGGAAAAGTAGACGCACAAACTTGGAATTC 38903 Query 10551 TATGATAAA--CTCAGGACTTGGCCCAACATTAAATGCCCTAGCTAAACAAATGGGCATT 10608 ||||| || |||| |||||| || || || ||| | |||||| | ||||| ||| Sbjct 38904 AATGATTAATGCTCA--ACTTGGTCCTACTCTATCTGCTATCGCTAAAAAGATGGGAATT 38961 Query 10609 ACCACTGGTGAG-TTAAAAAATGGTCTTTCAGAAGGTAAAATCTCAGTTAAAGACTTTCA 10667 || | || ||| ||||| || ||| | || ||||||| || || ||| |||| || || Sbjct 38962 ACAATGGGAGAGCTTAAAGAAGGGT-TGTCTCAAGGTAAGATTTCTGTTGAAGAGTTCCA 39020 Query 10668 AGAAGGATTAATTAAACTTGACAAAGAAGGTGGAGGCGGTCTTAAGTCATTAGAACAGAT 10727 | | |||||| || | || | ||||||| || || ||||| |||||| | || || Sbjct 39021 AAATCAATTAATAGAAATGGATACTAAAGGTGGCGGAGGACTTAAATCATTAAATCAAAT 39080 Query 10728 TGCCAAAGACTCTACAAAAGGTATTAGTACATCACTAGCAAATGCTAAAACAGC 10781 ||| ||||| || || || || |||| || || | ||||| |||||||| Sbjct 39081 TGCTAAAGATTCAACCAAGGGGATTAAAACCTCTATTCAGAATGCAAAAACAGC 39134 >seq7607 Length=81728 Score = 127 bits (140), Expect = 6e-25 Identities = 193/275 (70%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 21895 CGTGTGGCTGGTTGGTTAGTTCCTGATAAACCACAAGGTCCTATTGGACGATATGCATAT 21954 ||||| |||||||||||||| ||| | ||||| ||| || || ||| | |||| Sbjct 45478 CGTGTCGCTGGTTGGTTAGTACCTAACGCACCACGAGGACCAATCGGAGCAAGAGCATGG 45419 Query 21955 GTTATCTTCATGCAACATGGAACAAACAAAGAACTGACACGTGTTCAGTCTGCTGGTATT 22014 ||| | ||||| | ||||| || | || ||| |||| | ||||| |||||| Sbjct 45418 GTTTTGATCATGGAGCATGGCACGACTAATGAATTGACTAGATACGAGTCTAAGGGTATT 45359 Query 22015 AAACGCCCAGATGTTAAGAAAGCATATGGCTATCAAGGTGGGCAAGAGCTTGGTTTTGAC 22074 ||| || ||||| ||||| || || || ||||||||||| | | ||| || ||||| Sbjct 45358 TCACGGCCTGATGTCAAGAAGGCTTACGGTTATCAAGGTGGAGATGCGCTAGGGTTTGAT 45299 Query 22075 GTAACAGTCAATAAGAACCAGTTCAAAGGTAAAAAAGTAGACGTGATTTTGCGTAGAGCA 22134 ||||| |||||| || ||| |||||||| || | || | || || || |||||| Sbjct 45298 GTAACTTTCAATACTGACTGGTTAAAAGGTAAGAAGATCGATATTATCTTACGAAGAGCA 45239 Query 22135 AATAAATCTAATGGTGAAGGCGCAGTGAATGACGT 22169 ||| | | || |||||||| | ||| || || || Sbjct 45238 AATCGAGCGAAAGGTGAAGGTGTAGTCAACGATGT 45204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135929905431672