Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_024384.1 Length=41156 Score E Sequences producing significant alignments: (Bits) Value seq1539 122 2e-23 seq3145 107 5e-19 >seq1539 Length=57711 Score = 122 bits (134), Expect = 2e-23 Identities = 203/291 (70%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 5041 GTAGGACGATTAACGAAAGACCCTGAATTACGTTACACTCCAGCTGGAGTAGCTGTTGCG 5100 |||||||| ||||| ||||| || || |||||||| || || ||| ||| || || Sbjct 16152 GTAGGACGGTTAACCAAAGATCCCGATTTACGTTATACCGCAAGTGGCACAGCAGTGGCC 16093 Query 5101 ACTTTTACGCTAGCAGTAAATCGCCCATTTAAAAATGCACAAGGAGAACAAGAAGCCGAT 5160 |||||||| |||| || |||||| |||| ||| | | || | | |||||| ||| Sbjct 16092 ACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGAGAAGCTGAT 16033 Query 5161 TTCATTAATTGTGTTGTTTGGCGTAAACCAGCGGAAAACGCAGCTAATTTCTTGAAAAAA 5220 || || |||||||| ||||||||||||||||||||| |||| || ||||| Sbjct 16032 TTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTAGCTAAAAAG 15973 Query 5221 GGAAGCATGGCAGGCGTTGATGGACGTGTTCAAACTCGTAATTATGAGGA-CAGCGACGG 5279 || || | ||||| | ||||| ||||||| || | |||||| | |||| | || Sbjct 15972 GGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAACCAGC-AAGG 15914 Query 5280 TAAACGCGTTTTCGTTACTGAGGTAGTTGCTGAAACAGTTCAATTCTTAGA 5330 | || || | ||| ||||| || || || || | | ||| | ||||| Sbjct 15913 ACAGCGTGTCTACGTGACTGAAGTTGTGGCCGATAATTTCCAACTATTAGA 15863 >seq3145 Length=45091 Score = 107 bits (118), Expect = 5e-19 Identities = 206/299 (69%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 5041 GTAGGACGATTAACGAAAGACCCTGAATTACGTTACACTCCAGCTGGAGTAGCTGTTGCG 5100 |||||||| ||||||||||||||||| || || || || | |||| || ||| || Sbjct 1815 GTAGGACGTTTAACGAAAGACCCTGATTTGCGCTATACGAGCGGTGGAAAAGGTGTGGCT 1874 Query 5101 ACTTTTACGCTAGCAGTAAATCGCCCATTTAAAAATGCACAAGGAGAACAAGAAGCCGAT 5160 || ||||| || ||||| ||||| |||| ||| | ||||| | ||||| || Sbjct 1875 ACATTTACCCTTGCAGTTAATCGAAACTTTACCAATCAAGCCGGAGAGCGTGAAGCAGAC 1934 Query 5161 TTCATTAATTGTGTTGTTTGGCGTAAACCAGCGGAAAACGCAGCTAAT--TTCTTGAAAA 5218 ||| || | ||||| ||||| | ||||||||||||| |||||| | || | | Sbjct 1935 TTCGTTCAATGTGTGATTTGGAGGAAACCAGCGGAAACACTGGCTAATTATGCTCG--CA 1992 Query 5219 AAGGAAGCATGGCAGGCGTTGATGGACGTGTTCAAACTCGTAATTATGAGGA-CAGCGAC 5277 |||| | || |||||| ||||| ||||||| ||| |||||| | |||| | Sbjct 1993 GGGGAACCTTGCTAGGCGTGACCGGACGAATTCAAACACGTTCTTATGACAATCAGC-AA 2051 Query 5278 GGTAAACGCGTTTTCGTTACTGAGGTAGTTGCTGAAACAGTTCAATTCTTAGAGCCTAA 5336 || |||| |||| || || || || || || || | ||||||| || || |||| Sbjct 2052 GGGCAACGTGTTTATGTAACGGAAGTTGTAGCAGAGAATTTTCAATTGTTGGAATCTAA 2110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131327471311344