Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq37664 102 1e-16 seq8075 95.1 2e-14 >seq37664 Length=9217 Score = 102 bits (112), Expect = 1e-16 Identities = 156/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 143094 GGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATATAAATAAACCTCTT 143153 |||||||| || |||||| | |||| || ||| |||| ||||| | || || ||| Sbjct 2743 GGTATATGTGACAATTTATTGACATGTACAGTCCGAGCGTGGGACTTCTCAAAGCCACTT 2802 Query 143154 ATTTTTTGTCCCGCTATGAATAGCCTTATGTGGGAACATCCTATTACAGAAAAACATATA 143213 | || ||||| || ||||| | ||||||||||||||||||||| ||||| ||| Sbjct 2803 GTATTCTGTCCTGCAATGAACACTAGAATGTGGGAACATCCTATTACATCTAAACAAATA 2862 Query 143214 GATGCTTTAAAACATATGGG-TTTCATAGAAATAGAATGCATAGaaaaaaaaC--TAGCC 143270 |||| |||||| || ||| ||||| |||||| | || | || ||||| || Sbjct 2863 GATGTTTTAAAGGATTGGGGCTTTCA-AGAAAT-TCCTCCA-ATAAGTAAAACTTTAATG 2919 Query 143271 TGCGGAGACATAGGAAATGGTGCTATGGCAGAAGTT 143306 || ||||| | ||| ||||| ||||||||||||| Sbjct 2920 TGTGGAGATACAGGTGTTGGTGGTATGGCAGAAGTT 2955 >seq8075 Length=22473 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 182419 CAGGTAGACGCTCACAATATAGTACCTTGTTGGGAAGCTTCTGACAAAGAAGAATACGGT 182478 |||||||| ||||||||| | || || ||||||| |||||||| ||| | ||||| Sbjct 15486 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCA 15427 Query 182479 GCAAGAACTTTAAGAAAAAAGATATTTGATAAGTTATATGAATATATGACAGAATTTCCT 182538 |||||||| ||||||| || || | ||| ||| |||||||| | |||||||||||| Sbjct 15426 GCAAGAACAATAAGAAATAAAATCAATTCTAAATTAGATGAATATCTCACAGAATTTCCT 15367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901603429018240