Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq11297 199 9e-46
seq26891 122 2e-22
>seq11297
Length=12984
Score = 199 bits (220), Expect = 9e-46
Identities = 433/644 (67%), Gaps = 13/644 (2%)
Strand=Plus/Plus
Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579
|| || || ||| ||| || || |||||| ||||||||||||| |||| || | |||
Sbjct 11135 TCCTGTTTCCTTATAGCTATGAAAGATGATAGCATTGAAGGTATTTTTGATACTTTAAAA 11194
Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGT----ATTCACGTT-CATGATA 110634
|| ||| | ||||||||| |||| || || ||| || ||| || ||| | |
Sbjct 11195 CAATGTGCATTAATTTCTAAATCTGCTGGTGGCATAGGTTTACATACACATTGCATCAGA 11254
Query 110635 TTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAA 110694
||||| || | | || || | || || | |||| ||| || || ||||
Sbjct 11255 ---GCTCAG--GGTTCTTACATAGCTGGCACTAATGGGGTCTCAAATGGTCTAGTGCCAA 11309
Query 110695 TGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---G 110751
|||| ||||| | ||| | || || | |||||| |||||||||| || | | | |
Sbjct 11310 TGTTGAGAGTGTATAACAATACCGCCAGATATGTAGATCAAGGTGGAAACAAACGTCCCG 11369
Query 110752 GCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTC 110811
|| ||||||| || ||| | || ||||||||| | ||||||||||||||||| || |
Sbjct 11370 GCGCATTTGCAATTTATTTAGAGCCTTGGCATGCGGATATATTTGAATTCTTGGATTTAA 11429
Query 110812 GTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTT 110871
|| || ||| |||||| ||||| | || | |||||||| | |||||
Sbjct 11430 AGAAGAACACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATAC 11489
Query 110872 CAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATC 110931
||||| | || |||||| | || || | ||| | ||| ||| ||||||||||||
Sbjct 11490 CAGATCTGTTTATGAAAAGAGTAGAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCATG 11549
Query 110932 GTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATG 110991
|| |||||| || |||| | |||| | || |||||||| || || | |||||||
Sbjct 11550 ATTGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGAAGAACTATATGCCAAATATG 11609
Query 110992 AAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTG 111051
|| ||||| ||| |||||| | ||||||||| | ||| ||| | |
Sbjct 11610 AAGAAGAAAAACGATTTATAAAACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAG 11669
Query 111052 AATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAAT 111111
|| | ||||| || ||||| || || || || |||||||| ||| | ||| | ||
Sbjct 11670 AAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGA 11729
Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155
|||||||| ||| | || || ||||| | ||| ||| | |||
Sbjct 11730 GTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 11773
>seq26891
Length=10613
Score = 122 bits (134), Expect = 2e-22
Identities = 349/520 (67%), Gaps = 34/520 (7%)
Strand=Plus/Minus
Query 304982 CGCATTAAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041
||| | ||||||||||| || | || |||| ||||| |||||||| || ||||| |||
Sbjct 10489 CGCTTAAAAGGTAAAGAAGGGAGAATCAGAGGAAATCTTATGGGAAAGCGAGTTGACTTT 10430
Query 305042 AGTGCAAGAAGTGTAATCACACCTGATTCTCAAATTA-GTCTTCATGAATTAGGAGTTCC 305100
||| |||| |||||||| |||||| || || ||| || || || || | ||||| ||
Sbjct 10429 TCTGCCAGAACCGTAATCACTCCTGATCCT-AATTTACGTATTGATCAAGTGGGAGTGCC 10371
Query 305101 AATTGAAATTGCTTTAAAACTAACATTTCCAGAGAAAGTTA-ACGAGAAAAATATTAAAC 305159
|||||| ||| ||||||| ||||| ||| | || | || ||| | |
Sbjct 10370 TCGCTCTATTGCTCAAAATTTAACATTCCCAGAACTAGTAACACCATTTAA-TATAGACC 10312
Query 305160 ATTTG-AGACGTTGTGTTCTTAATGGAAATAGCA-AGTATCCAGGTGCTCGTGCTGTTAT 305217
|| || |||| |||| || |||||| ||| ||||||||||||| |||
Sbjct 10311 GAATGCAGGAGTTG-GTTCGTAGGGGAAAT-GCACAGTATCCAGGTGCAAAG-----TAT 10259
Query 305218 AAAACACAAGCAAAAGAAGACA--ATATCTTTGAACCATATCGATTTAAAACAATTCAGT 305275
| | | || || | ||| | ||| | ||| | || || ||| | || |||
Sbjct 10258 ATAGTCCGAGATAATGGAGAAAGAATAGATCTGAGG--TTTC-ATCCAAAGCCAT-CAG- 10204
Query 305276 AAAATGCTTGAAATTAATGATATTGTTATCA--------GACATTTGAATGACAATGATT 305327
|| ||| | ||| |||| |||| | | || |||| ||| | ||||
Sbjct 10203 ---AT--TTGCATTTACA-ATATGGTTACAAAGTGGAGCGTCACTTGAGAGACGACGATT 10150
Query 305328 GGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCA 305387
|||| | |||||| | || ||| | |||| |||||| |||||||| ||| | || |
Sbjct 10149 TGGTTATTTTCAATCGACAGCCAACTTTGCACAAAATGAGTATGATGGGTCACAGGGTGA 10090
Query 305388 AAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGG 305447
||||||| | | | |||||||| | ||| | ||| | | |||| || ||||| |
Sbjct 10089 AAGTATTGCCGTGGTCCACATTTCGTATGAATTTGAGTTGTACTTCGCCATACAATGCTG 10030
Query 305448 ATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
||||||| || || ||||||||| | ||||||||||||||
Sbjct 10029 ATTTTGACGGCGACGAAATGAATTTACATGTACCTCAATC 9990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1184378556452724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |