Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq11297 199 9e-46 seq26891 122 2e-22 >seq11297 Length=12984 Score = 199 bits (220), Expect = 9e-46 Identities = 433/644 (67%), Gaps = 13/644 (2%) Strand=Plus/Plus Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579 || || || ||| ||| || || |||||| ||||||||||||| |||| || | ||| Sbjct 11135 TCCTGTTTCCTTATAGCTATGAAAGATGATAGCATTGAAGGTATTTTTGATACTTTAAAA 11194 Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGT----ATTCACGTT-CATGATA 110634 || ||| | ||||||||| |||| || || ||| || ||| || ||| | | Sbjct 11195 CAATGTGCATTAATTTCTAAATCTGCTGGTGGCATAGGTTTACATACACATTGCATCAGA 11254 Query 110635 TTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAA 110694 ||||| || | | || || | || || | |||| ||| || || |||| Sbjct 11255 ---GCTCAG--GGTTCTTACATAGCTGGCACTAATGGGGTCTCAAATGGTCTAGTGCCAA 11309 Query 110695 TGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---G 110751 |||| ||||| | ||| | || || | |||||| |||||||||| || | | | | Sbjct 11310 TGTTGAGAGTGTATAACAATACCGCCAGATATGTAGATCAAGGTGGAAACAAACGTCCCG 11369 Query 110752 GCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTC 110811 || ||||||| || ||| | || ||||||||| | ||||||||||||||||| || | Sbjct 11370 GCGCATTTGCAATTTATTTAGAGCCTTGGCATGCGGATATATTTGAATTCTTGGATTTAA 11429 Query 110812 GTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTT 110871 || || ||| |||||| ||||| | || | |||||||| | ||||| Sbjct 11430 AGAAGAACACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATAC 11489 Query 110872 CAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATC 110931 ||||| | || |||||| | || || | ||| | ||| ||| |||||||||||| Sbjct 11490 CAGATCTGTTTATGAAAAGAGTAGAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCATG 11549 Query 110932 GTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATG 110991 || |||||| || |||| | |||| | || |||||||| || || | ||||||| Sbjct 11550 ATTGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGAAGAACTATATGCCAAATATG 11609 Query 110992 AAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTG 111051 || ||||| ||| |||||| | ||||||||| | ||| ||| | | Sbjct 11610 AAGAAGAAAAACGATTTATAAAACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAG 11669 Query 111052 AATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAAT 111111 || | ||||| || ||||| || || || || |||||||| ||| | ||| | || Sbjct 11670 AAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGA 11729 Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 |||||||| ||| | || || ||||| | ||| ||| | ||| Sbjct 11730 GTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 11773 >seq26891 Length=10613 Score = 122 bits (134), Expect = 2e-22 Identities = 349/520 (67%), Gaps = 34/520 (7%) Strand=Plus/Minus Query 304982 CGCATTAAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041 ||| | ||||||||||| || | || |||| ||||| |||||||| || ||||| ||| Sbjct 10489 CGCTTAAAAGGTAAAGAAGGGAGAATCAGAGGAAATCTTATGGGAAAGCGAGTTGACTTT 10430 Query 305042 AGTGCAAGAAGTGTAATCACACCTGATTCTCAAATTA-GTCTTCATGAATTAGGAGTTCC 305100 ||| |||| |||||||| |||||| || || ||| || || || || | ||||| || Sbjct 10429 TCTGCCAGAACCGTAATCACTCCTGATCCT-AATTTACGTATTGATCAAGTGGGAGTGCC 10371 Query 305101 AATTGAAATTGCTTTAAAACTAACATTTCCAGAGAAAGTTA-ACGAGAAAAATATTAAAC 305159 |||||| ||| ||||||| ||||| ||| | || | || ||| | | Sbjct 10370 TCGCTCTATTGCTCAAAATTTAACATTCCCAGAACTAGTAACACCATTTAA-TATAGACC 10312 Query 305160 ATTTG-AGACGTTGTGTTCTTAATGGAAATAGCA-AGTATCCAGGTGCTCGTGCTGTTAT 305217 || || |||| |||| || |||||| ||| ||||||||||||| ||| Sbjct 10311 GAATGCAGGAGTTG-GTTCGTAGGGGAAAT-GCACAGTATCCAGGTGCAAAG-----TAT 10259 Query 305218 AAAACACAAGCAAAAGAAGACA--ATATCTTTGAACCATATCGATTTAAAACAATTCAGT 305275 | | | || || | ||| | ||| | ||| | || || ||| | || ||| Sbjct 10258 ATAGTCCGAGATAATGGAGAAAGAATAGATCTGAGG--TTTC-ATCCAAAGCCAT-CAG- 10204 Query 305276 AAAATGCTTGAAATTAATGATATTGTTATCA--------GACATTTGAATGACAATGATT 305327 || ||| | ||| |||| |||| | | || |||| ||| | |||| Sbjct 10203 ---AT--TTGCATTTACA-ATATGGTTACAAAGTGGAGCGTCACTTGAGAGACGACGATT 10150 Query 305328 GGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCA 305387 |||| | |||||| | || ||| | |||| |||||| |||||||| ||| | || | Sbjct 10149 TGGTTATTTTCAATCGACAGCCAACTTTGCACAAAATGAGTATGATGGGTCACAGGGTGA 10090 Query 305388 AAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGG 305447 ||||||| | | | |||||||| | ||| | ||| | | |||| || ||||| | Sbjct 10089 AAGTATTGCCGTGGTCCACATTTCGTATGAATTTGAGTTGTACTTCGCCATACAATGCTG 10030 Query 305448 ATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 ||||||| || || ||||||||| | |||||||||||||| Sbjct 10029 ATTTTGACGGCGACGAAATGAATTTACATGTACCTCAATC 9990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1184378556452724