Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq16183 132 1e-25 seq32113 123 6e-23 seq48995 113 1e-19 >seq16183 Length=3749 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| ||||| |||||||||||| |||||| ||| ||||| Sbjct 1064 AAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCTGATACAATCGAAAAC 1005 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||| ||||| || ||||| ||| || || |||||||| || ||| Sbjct 1004 GTAAAGGCAAAGATACAAGACAAGGAAGGCATTCCTCCAGATCAACAAAGACTGATTTTC 945 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| |||||||||| | || || | || || || ||||||| || ||| Sbjct 944 GCCGGAAAGCAACTGGAAGATGGGCGCACGCTGTCAGACTATAATATCCAGAAGGAATCT 885 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| | ||| | || ||| | || || Sbjct 884 ACTTTGCACTTAGTGTTGCGTCTACG 859 Score = 122 bits (134), Expect = 2e-22 Identities = 140/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || || || |||||||||||||| || |||||| ||| | ||| || ||||| Sbjct 827 ACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTCTGATACAATTGAAAATGTTAAAGCG 768 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||||| || ||||| |||||| || || ||||||||||| || || ||||| Sbjct 767 AAA-ATTCAGGATAAAGAGGGAATTCCCCCAGATCAGCAAAGACTTATTTTTGCTGGAAA 709 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 |||| | ||||||||| | || | | ||||||||| | |||||||| |||||| | || Sbjct 708 GCAGCTAGAAGATGGACGCACACTATCTGATTACAACATTCAGAAAGAATCTACTTTGCA 649 Query 206373 CCTTGT 206378 ||| || Sbjct 648 CCTAGT 643 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||||| || || || ||||| ||||| |||||||||||| |||||| Sbjct 620 CAAATATTTGTAAAAACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTCTGAT 561 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| || ||| || ||||| || ||||| || ||| || || ||| Sbjct 560 ACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCAGCAA 501 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||||||| || || ||||||||| | ||||||||| | || | | || ||||| | Sbjct 500 AGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACAATATT 441 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || |||||| | || || || Sbjct 440 CAGAAGGAATCTACTTTGCATCTGGT 415 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | ||| || | ||| | |||||| || ||||||| ||||||||| | || || Sbjct 859 CGTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGCGTG 918 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||||| |||||||||||||| || || | ||||||| Sbjct 919 CGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGA 963 >seq32113 Length=13445 Score = 123 bits (136), Expect = 6e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| |||||| || || |||||||| || ||||| ||||| || || ||| Sbjct 6647 CAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTAGAAGTTGAGCCATCAGAC 6588 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || ||||||||| || ||||||||| || || || Sbjct 6587 ACCATTGAAAATGTTAAAGCTAA-GATTCAAGATAAGGAAGGAATTCCTCCAGATCAACA 6529 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | ||||||||||| || ||||| |||||||||| | || || | || ||||| | Sbjct 6528 ACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAATAT 6469 Query 206352 CCAGAAAGAGTCTACTCTTCAC 206373 |||||||||||| || |||||| Sbjct 6468 CCAGAAAGAGTCCACCCTTCAC 6447 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||| || || ||||| || || || ||| |||| ||||| |||||| Sbjct 7103 CAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAGCCATCTGAC 7044 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| |||||| |||||||||||| ||||| || ||| || || ||| Sbjct 7043 ACCATTGAAAATGTAAAGGCAAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAACAA 6984 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||| || || |||||| | |||||||| | || || | || |||||| || Sbjct 6983 CGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAACATC 6924 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || ||||||||||| ||||| Sbjct 6923 CAAAAAGAGTCTACCCTTCA 6904 Score = 120 bits (132), Expect = 7e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| |||||||| || ||||| ||||| ||| |||||||||| | ||| Sbjct 7319 AAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCTGACACAATTGAAAAT 7260 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || ||||| ||||| || || || || || | |||||||| Sbjct 7259 GTGAAAGCTAAA-ATCCAAGACAAAGAGGGCATCCCACCTGATCAGCAGCGTCTTATCTT 7201 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| ||||||||||| | || || | || |||||| |||| || ||||| Sbjct 7200 TGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAACATCCAAAAGGAGTC 7141 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| ||||| || || || | || ||| Sbjct 7140 TACCCTTCATCTAGTACTGCGTCTGCGA 7113 Score = 114 bits (126), Expect = 3e-20 Identities = 164/228 (72%), Gaps = 5/228 (2%) Strand=Plus/Minus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| ||| ||||| || || || ||||| || ||||||||||| ||| Sbjct 7793 AAAATG---CAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAA 7737 Query 206224 AGTTCTGACACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282 ||| || || | ||| ||||| || ||| |||||||| || ||||| ||| || Sbjct 7736 CCTTCCGATACTATTGAAAATGTAAAAGCCAAA-ATTCAAGACAAGGAAGGCATTCCTCC 7678 Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342 || ||| | | || ||||| |||||||| |||||||| ||| | ||| | | || Sbjct 7677 AGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGA 7618 Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || | || ||||| |||||||||||| | || ||| | ||||| Sbjct 7617 CTATAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCG 7570 Score = 100 bits (110), Expect = 7e-16 Identities = 145/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| |||||| | || ||||| || || || ||||||| ||| |||||| Sbjct 6875 CAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCTGAC 6816 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||| || ||||| || || || || || ||| || Sbjct 6815 ACAATTGAGAATGTCAAAGCTAAA-ATACAAGATAAGGAGGGCATCCCCCCAGACCAACA 6757 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | || || || || |||||||| ||||||||||| | |||||| | |||||||| | Sbjct 6756 GCGCCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAATAT 6697 Query 206352 CCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || || ||| Sbjct 6696 TCAGAAAGAGTCAACCCTGCAC 6675 Score = 96.9 bits (106), Expect = 8e-15 Identities = 74/88 (84%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 204769 GTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 204828 |||||| || ||||||||||||| ||| ||||||| || || | ||||||||||| || Sbjct 6447 GTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGTTG 6506 Query 204829 CTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||| || ||||||||||| ||||||||| Sbjct 6507 CTTACCAGCGAAGATAAGACGTTGTTGA 6534 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || ||||||||||| |||||||| || || ||| || ||| Sbjct 7559 CAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTCCGAC 7500 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| |||||| ||||| ||||| || ||| || || || Sbjct 7499 ACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAACAG 7440 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || || || || ||||| || |||||||||| | || || | ||||| || | Sbjct 7439 AGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATATT 7380 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || ||||| || || | || ||| | ||||| Sbjct 7379 CAAAAGGAATCTACCCTACATTTAGTATTGCGGCTTCG 7342 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | ||| || | |||||||||||| ||||| || | ||||||||||| | ||| Sbjct 7570 CGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTG 7629 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||| ||||||| |||||||| ||||| || | ||||||||| Sbjct 7630 CGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGA 7674 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || ||||| ||||| || || || ||||| ||| || ||| Sbjct 6419 CAGATCTTTGTAAAGACACTGACAGGGAAAACTATTACATTAGAAGTTGAACCCTCAGAC 6360 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || ||| ||||| ||||| || ||| || || || Sbjct 6359 ACTATTGAAAATGTTAAAGCCAA-GATCCAAGACAAAGAGGGTATTCCCCCAGATCAACA 6301 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | || || ||||| || |||||| |||| ||||| | ||| | | || ||||| | Sbjct 6300 ACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTACAATAT 6241 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTT 206381 ||||||||||| ||| | ||| | || || Sbjct 6240 TCAGAAAGAGTCCACTTTGCACTTGGTATT 6211 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 204770 TGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 204829 ||||| ||||||||||| |||| || ||||||| || || | |||||||| |||||| Sbjct 6904 TGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCTAGCTGC 6963 Query 204830 TTTCCGGCGAAGATAAGCCGTTGTTGA 204856 || || || |||||||| ||||||||| Sbjct 6964 TTGCCAGCAAAGATAAGACGTTGTTGA 6990 >seq48995 Length=1108 Score = 113 bits (124), Expect = 1e-19 Identities = 148/204 (73%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 206180 TTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTC 206238 |||| ||| || || || || ||||| |||||||||||||||||| |||||| ||| | Sbjct 1 TTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCTGATACAATA 60 Query 206239 GAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTT 206298 ||| || ||| || |||||||| || ||||| ||| || ||| || || || Sbjct 61 GAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAGAGGCTG 120 Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358 || ||||| || || ||| | ||||||||| | ||| || | || || || | || ||| Sbjct 121 ATTTTCGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAATATTCAAAAA 180 Query 206359 GAGTCTACTCTTCACCTTGTTTTG 206382 || |||||| | ||| | ||| || Sbjct 181 GAATCTACTTTGCACTTAGTTCTG 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179396795425364