Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_025453.1 Length=40286 Score E Sequences producing significant alignments: (Bits) Value seq7607 212 2e-50 seq14859 170 5e-38 seq64495 98.7 3e-16 >seq7607 Length=81728 Score = 212 bits (234), Expect = 2e-50 Identities = 230/300 (77%), Gaps = 14/300 (5%) Strand=Plus/Minus Query 22338 GGCTTTTTATATTGCCTTCTTACTGCTTACAGGCACTAAAGAGAAAGCTGTTTCGATTGA 22397 |||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| ||| Sbjct 64043 GGCTTTTTATTATGCCTTCTTCCTGCTTACAGGCACTAAAGAGAAAGCTGTTCCGACTGA 63984 Query 22398 TAGGCGTAACTTATCAAATATATCGGGTAGCGGCGTAACCGTGGAGGA-TAATCATGAAA 22456 ||||||||| | |||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 63983 CTGGCGTAACTAGTTAAAT-TATCGGGTAACGGCGTAACCGTGGAGGACTAATCATGAAG 63925 Query 22457 ACaaaaaaaCTATTATTGCCAATGCATTTACAATACTTTGCTGATAATCCAGATACTGGC 22516 | |||| ||||| |||| ||| || |||||||||||||||| |||||||| |||| Sbjct 63924 AAAAAACGTTTATTAATGCCTATGAATCTACAATACTTTGCTGAAAATCCAGAGGGTGGC 63865 Query 22517 GCTGGAGATACGGACCAACCGGCCGGAGGTCAAGAGCAAACACCGCCAGGAGATAGCGGC 22576 | ||||| ||| ||||| || | ||| | || || || | || || Sbjct 63864 AAT---GATAC--ACC-----GCCGGCGG--ATGAGAAGACGCCACCTGAAGGTAAACAA 63817 Query 22577 AAAGATAAAGGTAATGAAAAAACGTTTTCTCGTGGTGAAGTAGCAAAAATGATCGCTGCT 22636 | | | ||| | || ||||| |||||||||| || |||||||||||||| || ||| Sbjct 63816 CAGGGTGAAGAGACTGGCAAAACATTTTCTCGTGACGACGTAGCAAAAATGATTGCCGCT 63757 Score = 145 bits (160), Expect = 2e-30 Identities = 230/326 (71%), Gaps = 3/326 (1%) Strand=Plus/Minus Query 35689 GGTGGAAAATATGGTGATTATTGATAATCAAGCGTTGATACTAGAATTCAAGAATATGAT 35748 |||||||| |||||||||||||||||| | ||| || ||| || |||||| | | Sbjct 46840 GGTGGAAAC-ATGGTGATTATTGATAATTTGGTTTTGTTATCAGAGTTTAAGAATTTAGT 46782 Query 35749 TTCTAACGGTTTTATTCAGGTGTTTGTCTGGATTGTGTTAGGGGATATCTTAACAGGATT 35808 | || | | |||||| | |||||||||||||| | | ||||| | ||||| | Sbjct 46781 TAGCAATGTCTATATTCAAATTTTTGTCTGGATTGTTATTGCAGATATTATTACAGGTAT 46722 Query 35809 ATGTAAAGGTATTTTCATTAAGGAAGGAAATAGCACAAAAGGATTGCTAGGATTAGTAAA 35868 |||||||| ||| || |||| |||||| ||||| || || | || |||| || Sbjct 46721 TTGTAAAGGAATTGCTGGAAAAGAAGCAAATAGTACAAAGGGGTTAATGGGTGTAGTGAA 46662 Query 35869 ACATTTATTAGTGG-TCTGCTTAATAAGCGTTGCTTATCCATACTTGAAAATCATGGGTC 35927 || |||||||||| | |||| | | |||||||||||||| | ||||| ||| | Sbjct 46661 GCACTTATTAGTGGTTGGGCTTGTTCTG-GTTGCTTATCCATATCTAAAAATAATGAATT 46603 Query 35928 TAGAATCAATCGCTACTGGATTTGTCTTATTTTATATAGCAGTGTATGGCATTTCCATTA 35987 | ||| |||| || | || || ||| ||||||||| || || || || || | | Sbjct 46602 TCGAAGGTGTCGCAACAGCTTTCGTTCTATCTTATATAGCTGTTTACGGGATCTCTGTCA 46543 Query 35988 TTGAAAACTTAGGGCAGTTAGGCGTT 36013 ||||||| || || |||||||| ||| Sbjct 46542 TTGAAAATTTGGGACAGTTAGGTGTT 46517 Score = 93.3 bits (102), Expect = 1e-14 Identities = 230/343 (67%), Gaps = 11/343 (3%) Strand=Plus/Minus Query 10547 ATCGATGTTAATCCTAATCTAGTTGCAGATTTTAGAAATATGCCTTTTGAGGATAATTCG 10606 ||| |||| || || || | || || || |||||| | || |||||||| ||||| | Sbjct 76104 ATCAATGTGAAACCAGATGTTGTAGCTGACTTTAGAGACATACCTTTTGAAAATAAT--G 76047 Query 10607 TTTT--ATCATGTAGTATTTGATCCTCCACATTTATTGAGAGCTGGTAGTAA--CAGCTG 10662 ||| || || ||||||||||| |||||||| | ||||| || || | Sbjct 76046 TTTACGATTTAGTTGTATTTGATCCACCACATTTGAAATGGGCTGGCCAGAATTCAATTA 75987 Query 10663 GCTGTCCAAAAAATATGGAAAGCTGAATGAGCAAACTTGGAAAGAAGATATTCAAAAAGG 10722 || | |||| ||| |||| | | | || ||| ||||||||| || | || Sbjct 75986 --TGAAAGGACAATACGGACAGCTAGACAAAGATACCTGGCCAGAAGATATAAAACAGGG 75929 Query 10723 TTTTTCGGAATGTATGAGAGTCTTAAAACCTAACGGGACATTAGTTTTCAAATGGAATGA 10782 | | || || |||||| | || ||||| || ||||| ||||| |||||||||||||||| Sbjct 75928 TATGTCAGAGTGTATGCGTGTTTTAAAGCCCAACGGAACATTGATTTTCAAATGGAATGA 75869 Query 10783 AGACCAAATCAGGCTATCTGAAATATTAAGCATAATTGA--CTATGAG-CCATTATATGG 10839 |||| | | || || | |||| |||||| | | || || || | ||| Sbjct 75868 GAACCAGGTAAAACTCAAAGATGTTTTAAAATCAATTGAACCATTCAGACCTTTGTTTGG 75809 Query 10840 CAATAAAAGAGCGAAAACGCACTGGTTAGTGTTTATGAAAGAG 10882 |||||||| | || ||||||||||| |||||||| ||| Sbjct 75808 AAATAAAAGGAGTCAGACACACTGGTTAGTTTTTATGAAGGAG 75766 Score = 80.6 bits (88), Expect = 7e-11 Identities = 131/185 (71%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 20932 GATGCGATTCAAACCGAAATTGAAGCTAACTGGGATAGATTTTCCAATGGCCAAAAGATT 20991 |||||||| || | || || || || | ||||| || ||||||||||| || || || Sbjct 65913 GATGCGATACAGAAAGAGATAGACGCACAGTGGGACAGTTTTTCCAATGGACAGAAAATC 65854 Query 20992 ACAATTAGCGAAGCAAGAAAAATGGCTAATAAGATGGACGTAAAACGCTTTGAGAGAAAA 21051 || ||||||||| | || ||||| | ||||| |||||| |||| | || Sbjct 65853 ACTCGTAGCGAAGCGATGAAGCGAGCTAACGAAATGGATGTAAAAGCATTTGCTCGCAAG 65794 Query 21052 GCGAAGGAGTATGTAAAAAATAAAGACTTTAGTCC-ACAGGCCAATAAAGAATTGAAAAT 21110 || ||| ||||||| ||| | |||||||| ||| ||| || || || ||||| ||| Sbjct 65793 GCTAAGAAGTATGTTAAAGAAAAAGACTTCTCTCCGACA-GCAAACAAGGAATT--AAAG 65737 Query 21111 CTATA 21115 ||||| Sbjct 65736 CTATA 65732 >seq14859 Length=68005 Score = 170 bits (188), Expect = 5e-38 Identities = 162/206 (79%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 82 TTTTACTTGAACAAATCCCAAAAGCTAAAAGTTGTTTTATTATACACTTTATTATACATA 141 ||||| || || || |||||||||||| | || || || ||||| | |||||| || | Sbjct 12079 TTTTATTTAAATAAGTCCCAAAAGCTATACGTAGTCTTTTTATAAATTTTATTGTATGCA 12138 Query 142 GCCTTTTTGGGGTTCTTAATGAAACCAGTTCCTTTTTGCCCATAACCAGGAATTACTGCT 201 || |||||||| | ||||| | |||| ||||| | |||||||||||||| |||||| Sbjct 12139 GCTTTTTTGGGTCT-TTAATCCATCCAGAGCCTTTCTTGCCATAACCAGGAATCACTGCT 12197 Query 202 TTTTTAAGCTTACGTTTAGCTTTTCCAGTAGTACGAGCACTTATTGAtttttttATACTT 261 ||||| | || | ||| || ||||||||||| | ||| || || ||||||||||||||| Sbjct 12198 TTTTTTATTTTCCTTTTTGCCTTTCCAGTAGTTCTAGCGCTAATAGATTTTTTTATACTT 12257 Query 262 GGTTTACGCATTCCTACTTTCATGTA 287 ||||| | |||||||| |||||| || Sbjct 12258 GGTTTTCTCATTCCTATTTTCATCTA 12283 Score = 82.4 bits (90), Expect = 2e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 36998 GGCTCTTTTTAGGACCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTC 37057 |||| || | | ||| |||||||||||||| |||||| |||| |||||||||| ||||| Sbjct 49939 GGCTATTATCCGTACCCTTAGCTCAGTTGGTCAGAGCAGACGGATCATAACCGTCCGGTC 49998 Query 37058 ACAGGTTCGAGTCCT 37072 ||||||||||||| Sbjct 49999 GTAGGTTCGAGTCCT 50013 >seq64495 Length=424 Score = 98.7 bits (108), Expect = 3e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 37009 GGACCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGAG 37068 ||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct 311 GGACCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGAG 370 Query 37069 TCCTGTATGGTCCA 37082 |||| | |||||| Sbjct 371 TCCTACAAGGTCCA 384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128548763688384