Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq20 208 7e-49 seq32113 125 6e-24 seq48995 87.8 2e-12 >seq20 Length=148542 Score = 208 bits (230), Expect = 7e-49 Identities = 551/826 (67%), Gaps = 28/826 (3%) Strand=Plus/Minus Query 107672 TTCACCGACGACATCACGTACCTGATCCTGCCCAACTTTACGTTGTGGGACCACAACTTT 107731 ||||||||| ||| || ||||| |||| |||||| |||||||||||||| ||| Sbjct 87111 TTCACCGACACCATTGACTATTTGATCTTGCCACACTTTATATTGTGGGACCACAATTTT 87052 Query 107732 CTCGTGTTTCTCAACAAAAAGTTTAACAGTAAAAAAGAGGGTGGATTGGTCAACATTTGG 107791 || | |||||||||||| ||| ||| ||| | || | ||||| |||||| | Sbjct 87051 GTCATTTTTCTCAACAAAGCGTTCAACTCCAAACACGACAACAGCTTGGTGGACATTTCG 86992 Query 107792 GGATGTATGCAAAAGATCACTCTGGCGCAAGGAGTGCTCAAAGATTTGATACAGAACAAG 107851 | ||||||| || | || | || || | ||||||| | |||| ||| Sbjct 86991 AGCGCCCTGCAAAAAATTAAACTCACACACGGCATCATCAAAGACCAATTGCAGAGCAAA 86932 Query 107852 AACGGATACGCAGGCCAGTATTTGTACTCGACGTTTCTGAACACGGCCAGTTTCTACGCC 107911 ||||| ||||| | || |||||||| ||||||||||| ||||| ||| ||||| ||| Sbjct 86931 AACGGTTACGCCGTTCAATATTTGTATTCGACGTTTCTCAACACCGCCTCCTTCTATGCC 86872 Query 107912 AACGTTCAATGTTTCAACGGTATCAACGAGATCATCCCGCCCCAGTCGTCGGTGCAGCGT 107971 ||||| || ||||| ||||| ||||||| ||| | ||||| | | || | || Sbjct 86871 AACGTGCAGTGTTTGAACGGCGTCAACGAAATCGTTCCGCCGCGCGCCAGCGTCAACCGC 86812 Query 107972 TACTTTGGTAGACGTGATTTGAAACACTTGAAAGTGTGGAACACACGTCATCCTAACATT 108031 |||| || | || | || || || | |||| ||| || || || ||||| Sbjct 86811 TACTACGGCCGGCGGG---TGGGCAACGTGCGCGCCTGGACCACGCGACACCCCAACATC 86755 Query 108032 TCTCAGCTGTCCACCCAGATATCTAGAGTGAAAGAATCACCGTCATCATCGTACAATTGG 108091 |||||| ||| ||| | || ||| | ||| || | || | | ||||| Sbjct 86754 AGCCAGCTGAGCACGCAGGTGTCGGACGTG--CGCCTCAACGACTCCAAC-ACCGATTGG 86698 Query 108092 AACATTAAAGTGGGACTGGGCACGTTTGTGGGCGCGAACCGAGACTGTGACGGAGACAAG 108151 ||| | |||||||| |||||| ||| |||||| ||| || || || || ||||| Sbjct 86697 AACGTCAAAGTGGGCTTGGGCATATTTCCGGGCGCCAACACCGATTGCGATGGCGACAAA 86638 Query 108152 GAGGTGATCACGTACCTTCCCTACCCCAATTCGCTGATCGATCTCGAATCGTTGCTGTAC 108211 | | ||||| | || || | ||||| || ||||| || || | || ||||| Sbjct 86637 AAAATCATCACCTTTCTGCCGCAACCCAACAGTCTCATCGACCTGGAGTGTTTATTGTAC 86578 Query 108212 TGCGATCCCGTGTTCAGTTTCATATGTTTCGACAAGAACAAGCTGTCGTTCGTGTCTCAA 108271 |||| || ||| | ||||||||| ||||||||||| || |||||||| ||| Sbjct 86577 GGCGACCCGCGGTTTAATTTCATATGCTTCGACAAGAATCGACTCAGCTTCGTGTCCCAA 86518 Query 108272 CAAATTTACTATCTTCACAAGAACAGAGAACGAG-TGGAAGAGCTGCTTTTGCGC---TA 108327 |||||||||||||| ||| |||| | ||| | | ||| || || ||||| | | Sbjct 86517 CAAATTTACTATCTGTTCAAAAACATTG-ACGCGCTCGAA-CGC-GCGTTTGCACAATTG 86461 Query 108328 CCCGCACATTCACCGTTTATGGCTCAAAACGGTACGCGAAAGCTT-CAGCGTGCGACTCG 108386 |||| | | || || |||| || | ||||| | ||| ||| |||| || Sbjct 86460 CCCG-TCGTGAACATGTTGTGGCGCA----TGCACGCGCA--CTTGCAGTTTGCGCAGCG 86408 Query 108387 AGTG-----TTTGCTGCGCGATGTAACGCTCGTGTTCAGCTCGAACTGCGCCACGTTGCT 108441 || ||| ||||||| || | |||||||||||||| ||| |||| ||| | Sbjct 86407 TTTGGAAACGTTGTTGCGCGACGTCGCCCTCGTGTTCAGCTCCAACGCCGCCTATTTGTT 86348 Query 108442 GTTCAAAGCGCTCAAAG-ACCTGATCGATGACGAAGAGATGGTGTG 108486 ||||||| || | | | || |||||| ||||| || |||||||| Sbjct 86347 GTTCAAA-CGTTTGACGAACATGATCGCCGACGAGGAAATGGTGTG 86303 Score = 149 bits (164), Expect = 6e-31 Identities = 279/412 (68%), Gaps = 21/412 (5%) Strand=Plus/Minus Query 116731 ACTGGCCCGAATCGTGAAGAGTGTTGTTACCGTTGCGCACGCAATGCAACCCTTCAGGTA 116790 ||| ||| ||||||| | |||| | |||||||||| || ||||| | ||| | | Sbjct 99246 ACTCGCCACAATCGTGCGGCAAGTTGGTGCCGTTGCGCATCCATTGCAAACTTTCCGCCA 99187 Query 116791 GTCGGTTACCCATGAACGATTGGTTAATGCTCCACTGATCGAGTCGGGTACCTTCCAGTT 116850 || || |||| ||||| || || || ||||||| |||| || || || |||| || Sbjct 99186 TGCGATTGCCCACAAACGACTGATTCTTGGTCCACTGGTCGAAACGCGTGCCCTCCACTT 99127 Query 116851 TCTCGTAACCCGTAATACTTCTACCGATAAACTCTTTGTAAATGTTATCGGGCGTGTTGT 116910 | |||| ||||| | || ||| ||||||||| | ||||| ||||| ||||||| Sbjct 99126 TTTCGTGGCCCGTGTGGTTGCTCTTGATGAACTCTTTGAATATGTTGTCGGGAGTGTTGT 99067 Query 116911 TGAAGAACATGTACGGTATCAAGTACATTGGATA----------CTCACGTC-------- 116952 | || |||||||||||||| | || ||||| || ||| Sbjct 99066 TAAACAACATGTACGGTATGTTAAATATGGGATAGCGCGGCGCGTTCGGGTCGGCAAAAT 99007 Query 116953 --CCTTGTAGCGACACGTTTTTGTG-GGAATATGGTCAAAGTTGGATTGACGAGACAAGT 117009 || || ||||| ||| | ||| | |||||||||||| || || |||| Sbjct 99006 TTCCACCGCGCACCACGTACTTGCGCTCAATGTCGTCAAAGTTGGACTGGCGCGACAGAA 98947 Query 117010 AGGATATGGGCGATAGGCAGATTTGGGCGTGCACACCGTCGTCTGACACCCACTGCGATA 117069 | || | |||||| ||||||||||| |||||| ||||| || | || ||||| | | Sbjct 98946 ACGAGACGGGCGACAGGCAGATTTGTGCGTGCGTGCCGTCTTCCGCCATCCACTCGGTCA 98887 Query 117070 GATCCTCGGCTTGGTTGAGCACTCCCTTTTGACCGTGTATACCGCAAATCTT 117121 |||| ||| | ||||| ||| |||||||| ||||| || |||||||| || Sbjct 98886 GATCTTCGCTCTTGTTGAACACCCCCTTTTGGCCGTGGATGCCGCAAATTTT 98835 Score = 134 bits (148), Expect = 1e-26 Identities = 380/582 (65%), Gaps = 20/582 (3%) Strand=Plus/Plus Query 176 CCGAGGATCCCTTTCGCGGCCCTGGCAAGAATGTTAAGATCACCCTGTTCAAGGAGATCC 235 |||| || ||||| ||| || ||||| || ||| | || ||||||| ||||| | Sbjct 136672 CCGAAGACCCCTTCACCGGGCCCGGCAAAAACCAAAAGCTAACTTTGTTCAAAGAGATTC 136731 Query 236 GCCGGATCCAGCCTGATACCATGAAACTGGTGTGCAACTGGAGCGGCAAGGAATTTTTGC 295 || | |||| || || ||||| |||||| ||||||||||||||| || ||||||| Sbjct 136732 GCAATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGGAGCGGCAAAGAGTTTTTGC 136791 Query 296 GTGAATCCTGGACACGTTTCATCTCGGAAGAGTTCCCCATCACCACTGACCAAGAAATCA 355 ||||| | ||||| |||||| || ||| || ||||| || ||||| || | | Sbjct 136792 GTGAAACTTGGACCCGTTTCGTCGAGGACAGTTTTCCCATTGTCAACGACCAGGAGGTGA 136851 Query 356 TGGATCTGTGGTTCGAACTTCAGCTCAGGCCGATGCAGCCCAACAGGTGTTACAAGTTCA 415 |||| ||| ||| | | || || || | | ||||||| | ||||||||||| Sbjct 136852 TGGACGTGTTTCTCGTGATCAACCTGAGACCCACTCGGCCCAACCGTTGTTACAAGTTTT 136911 Query 416 CCATGCAGTACGCTCTCGCCGCCAACCCCGACTACGTGGCTCACGACGTGATCCGTCAGC 475 || |||| ||| || |||| |||||| | ||||| ||||| || || | Sbjct 136912 TGGCTCAACACGCGCTCCGTTGGGACGCCGAGTACGTGCCGCACGAAGTGATTCG-CATC 136970 Query 476 -ACGATCCCTACTACGTCGGCCCCGACAACAAGGAACGCATCAACCTGTCCAAGCGCGGT 534 ||| ||| ||||| |||| |||| || | | |||| || | || ||||| Sbjct 136971 GTCGAACCCATGTACGTGGGCCAGAACAATGAGTACAGAATCAGTTTGGCGAAACGCGGC 137030 Query 535 CTCGCCTTCCCACTGACCTGTCTGCAGTCCATCTACAACGAGAAC---------TTTGAA 585 || | ||| | | || | ||| ||| |||| || |||||| Sbjct 137031 GGCGGTTGCCCCATCA------TGAA---CATACACAGCGAGTACACCAACTCGTTTGAA 137081 Query 586 GAGTTCTTTGACCAGGTGCTGTGGCCCTACTTCCACCGTCCCCTCGTCTACATCGGCACC 645 |||| | ||| || | ||| |||| || ||| |||| ||||| |||||| Sbjct 137082 TCGTTCGTCAACCGCGTCATCTGGGAGAACTTTTACAAGCCCATCGTGTACATTGGCACC 137141 Query 646 ACGTCCTCTGAGGTCGAGGAGGTTATGATTGAGGTGGCGTTGCTGTTCAAGATCAAGGAG 705 || | || | ||||| || | || || ||| || | ||||||| | || ||| Sbjct 137142 GACTCTGCCGAAGAGGAGGAAATTCTCATCGAAGTGTCGCTCGTGTTCAAAGTTAAAGAG 137201 Query 706 TTTGCTCCTGACGTACCATTGTTCACCGGACCCGCTTATTAA 747 ||||| ||||||| || |||||||||| ||||| |||||| Sbjct 137202 TTTGCACCTGACGCGCCTCTGTTCACCGGTCCCGCATATTAA 137243 Score = 111 bits (122), Expect = 1e-19 Identities = 128/171 (75%), Gaps = 10/171 (6%) Strand=Plus/Minus Query 118754 CACGATGTAGTCTTTGGCGTACACGTCGCGCACATACAACACGTCGTCCTGTCGATCGTA 118813 ||| | ||| || ||||||||||||||||| || ||||||| |||||||| ||||| Sbjct 96917 CACCACGTAATCGCTGGCGTACACGTCGCGCGCAAACAACACATCGTCCTGCTTGTCGTA 96858 Query 118814 CACCAGCTGGATGGCGCGGTTCACGCTCTTCTCCTCGTCATAGTTGCCGTACAGAAACAT 118873 |||||| |||||||| || || | | |||||||| ||| ||||||||||| |||||| Sbjct 96857 CACCAGTTGGATGGCACGATTGATGTGCTTCTCCTGGTCGACGTTGCCGTACAAAAACAT 96798 Query 118874 GCGACGCAT--ATTCTTGTCGCGCGGGTACTGTTTGTCGAAAAAGTTGTGC 118922 |||| | | | || | | ||| |||||||| |||| |||||| Sbjct 96797 ---ACGCTTGCAATGTTTT-----GCGTATAGTTTGTCGTAAAAATTGTGC 96755 Score = 104 bits (114), Expect = 2e-17 Identities = 83/100 (83%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 59070 TGTGGGAACGCGGTTACGAGGACTACTACACGCTCGGTCAACAGCTCAGCATTCGTATGA 59129 ||||||| || || ||||||||| | ||||||||||| |||||| | |||||||| || | Sbjct 101857 TGTGGGAGCGAGGCTACGAGGACAATTACACGCTCGGCCAACAGTTGAGCATTCGCATCA 101916 Query 59130 CGACCAACCTGATTCAAAGCGGGCTGGATTTCAAGCATCA 59169 | ||||| ||||| || |||||| ||||||| || ||||| Sbjct 101917 CCACCAAACTGATACAGAGCGGGTTGGATTTTAAACATCA 101956 Score = 93.3 bits (102), Expect = 4e-14 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 117453 AGTTTGTGCACCTTGTTGTTGTACACGCGTATCGGCAGCGAGACGTGCGGAATGTACGGA 117512 ||||||| | ||||||||| ||| || | |||| || |||||||||||| || Sbjct 98413 AGTTTGTTAATTTTGTTGTTGAACAAACGCACGGGCAACGCCGAGTGCGGAATGTATGGG 98354 Query 117513 TCTTCGGCAGTCTTCAGTCGATTGTCGCGCACGATCGTCCACAGACAGAACATGCGGTCG 117572 |||||||| ||| ||| ||| ||||||||||| | |||||||| ||||| || | Sbjct 98353 TCTTCGGCCGTCATCAATCGGTTGTCGCGCACCAACGTCCACAATTTAAACATTTTGTTG 98294 Query 117573 TTACATC-TGATCGAGTCGTCCACCGCCAC 117601 || || | |||| || |||| ||||||||| Sbjct 98293 TT-CACCATGATGGATTCGTGCACCGCCAC 98265 Score = 91.5 bits (100), Expect = 1e-13 Identities = 172/251 (69%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 95105 AAAATATGCAAGGTGAAGGTGAAGCGTTCGTGCGGCACGCTGTTGGCACATTTCTACGCT 95164 ||| |||| || | |||||||| |||| | | | || ||||||| || | | || Sbjct 69308 AAATTATGAAAA-TCAAGGTGAAACGTTTGGGGGCGTCGATGTTGGCGCACTATTTTGCC 69366 Query 95165 AAAGTATACTTGTCCAACAATTTCGAGTTTGAATTCCATCCTGGTAGCCAACCGAAAACA 95224 |||| || |||| | || |||||||||||| || || ||||| |||| ||| Sbjct 69367 GAAGTGCACGTGTCGTCGGGGTACGCGTTTGAATTCCACCCCGGCAGCCAGCCGAGAACG 69426 Query 95225 TTTCAAACGATGGACAGTAGCGAGGGTACGGTTGTGAAGGTGTTGTATCTGTGTGACGAT 95284 ||||||||| || ||| || | ||| | |||||| || |||| ||||| Sbjct 69427 TTTCAAACGGTGCACACGGACGGCGCCACGATC---AAGGTGATGGTGTTGTGCGACGAG 69483 Query 95285 TGCTGCAAACGCGAGCTAATAGATTACGTGCAGGGCGAGAACGGGTTCAATATTGCGTTT 95344 || ||||| | ||| | || |||||| |||||||||||| ||||||| | |||||| Sbjct 69484 TGTTGCAAGCAAGAGTTGCGCGAATACGTGAAGGGCGAGAACGCGTTCAATGTGGCGTTT 69543 Query 95345 CGCAACTGCGA 95355 || ||||| Sbjct 69544 AAGAATTGCGA 69554 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 118142 GGGCAGCACCACGTTCTTGCAGAGGAAAAACTTTTTACCCGCCACCGTCATCTCGCCATG 118201 |||||| |||||| ||| || ||||| || || ||||||||||||||||| || || Sbjct 97559 GGGCAGTCGCACGTTGCGGCACAGAAAAAATTTCTTGCCCGCCACCGTCATCTCACCGTG 97500 Query 118202 GAAGAAACTGTCCACGTACTTGACATAGTCCTTGGTGTGTTTCAACATGTCCTGCTGTAA 118261 ||| |||||||| | |||||||||| | || | || | | ||| ||||| | | Sbjct 97499 GAAAAAACTGTCAATGTACTTGACAAAATCGCGTTTCTGCATGAGCATCTCCTGGCGCAT 97440 Query 118262 ATTCTCGTTCACCACACGCAACACCTCGCAACCGATACGGTACTTGAGC 118310 ||||| | |||| ||| ||| ||||| |||||||||||| Sbjct 97439 GGCGTCGTTGGTGATGCGCACCACTTCGTTGCCGATGCGGTACTTGAGC 97391 >seq32113 Length=13445 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | || ||| || ||||||| ||| ||||||||||| || ||||| | Sbjct 7336 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 7395 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| || || || ||||| |||| || ||| || || | ||| Sbjct 7396 AATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGA 7455 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||| ||||| ||||||| ||||| | || | | |||||| || ||| ||| Sbjct 7456 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTACC 7515 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || | ||||| ||||| || || | ||| || ||||| |||||||||| Sbjct 7516 TCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATTC 7564 Score = 104 bits (114), Expect = 2e-17 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | ||| ||||| || | ||| || |||||||| || || || | Sbjct 7562 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAG 7621 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || |||| |||| ||||| || || || ||||| || || || || | || Sbjct 7622 AAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 7681 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAGTTGCCACCGTGTCGCTCGATTCC 35686 ||| || |||||||| ||| ||| |||| | | || | | || ||| | ||| Sbjct 7682 GAATGCCTTCCTTGTCT-TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 7740 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || |||| || || ||||||||||| | ||||||||||| ||||||||| || Sbjct 7741 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTG 7794 >seq48995 Length=1108 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 || |||||||| ||| ||||| ||||||||||| || | ||| || ||| | || || Sbjct 428 ACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGACAATGTGCGCCCATCTTCA 369 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || || || || || || || | || ||| ||||| | |||| | |||||| | | || Sbjct 368 AGTTGTTTTCCAGCGAAAATGAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTAT-CTTG 310 Query 35648 ATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | |||||| || | | || | | ||||| | || || || | || || ||||| Sbjct 309 AATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTT 250 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| || | |||||| ||||| || ||||| Sbjct 249 ACCAGTAAGAGTTTTTACAAAAATTTGCAT 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449891539466720