Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_027341.1
Length=130008
Score E
Sequences producing significant alignments: (Bits) Value
seq9304 333 2e-86
seq5392 100 2e-16
>seq9304
Length=29499
Score = 333 bits (368), Expect = 2e-86
Identities = 1157/1777 (65%), Gaps = 49/1777 (3%)
Strand=Plus/Minus
Query 68735 TATGAAGACCGCATTGCTTTTAATGCCTTAGTTATGGCTGATGGTGACGAACAATTGGCT 68794
|||||||| || | || || ||||| || | || |||| |||||| || | ||
Sbjct 6963 TATGAAGATCGTGTCGCATTCAATGCGTTGTACTTTGCGAATGGCGACGAAGAACTAGC- 6905
Query 68795 CTTAACATT-GCGCATGAAATGATTTCACAAACCT-ATCAACCTGCAACACCAACATTCT 68852
|||| | || || |||||||||| ||| ||| | ||||||| ||||| || |||| |
Sbjct 6904 CTTAGCTTTAGCTGATGAAATGATC-CACCAACGTTATCAACCAGCAACCCCTTCATTTT 6846
Query 68853 CTAATGCTGGTAAGTTG-CGTGGTGGTAATGCTGTATCATGTTTCCTTTTGAATATTGAA 68911
|||||||| | || ||| ||||| | ||| || |||||| |||| | | |
Sbjct 6845 TGAATGCTGG-ACGTAAACGTCGTGGTGAACTTGTTTCTTGTTTC---TTGACTCAAGTA 6790
Query 68912 ---GATAATATGACGTCTATTGGGCGCTCAGTAAATTCAGTTCTTCAATTGTCTAAAATG 68968
||| |||||| || || || || || | || || | | ||| | || |||
Sbjct 6789 ACGGATGATATGAATTCAATCGGTCGTTCGATCAACTCTGCCTTACAACTTTCACGAATC 6730
Query 68969 GGTGGTGGAGTTGGAATCA-ACTTAACTGATATCCGTCCGTCAGGAGACCCTATCAAGGG 69027
|||||||| ||||| |||| |||| || | | ||| | |||| || ||||| ||
Sbjct 6729 GGTGGTGGTGTTGGGATCACACTTT-CTAACTTACGTGAAGCCGGAGCGCCGATCAAAGG 6671
Query 69028 TATTGAGAATATG--GCTGATGGAGTTGTTCCAATCATGAAACTCTATGAAGATTCATTT 69085
| ||| || ||| || ||||||||| |||||||| | | ||||||| |||
Sbjct 6670 A--TACGAAGGTGCAGCTAGCGGTGTTGTTCCAGTCATGAAATTGTTTGAAGATAGCTTT 6613
Query 69086 TCATATGCCAATCAGTTGGGGACAA-GAAATGGGGCAGGAGTAACTTATCTCAATGTATT 69144
||| | || || || || |||| | | || || || || |||| | || || ||
Sbjct 6612 AGTTATTCGAACCAATTAGG-ACAACGTCAAGGTGCGGGTGTCGTTTATTTAAACGTCTT 6554
Query 69145 CCATAAAGATATTGTTAAATTCCTCTCTACaaaaaaaGAAAATGCTGACGAAAAAGTTCG 69204
||| ||| || | | ||||| || |||||||||||||||| |||||||| ||||
Sbjct 6553 CCACCCAGACATCATGATGTTCCTTTCAGCAAAAAAAGAAAATGCAGACGAAAAGATTCG 6494
Query 69205 TGTTAAAACTCTTTCTCTCGGTGTTGTAGTTCCTGATAAATTCTATGAACTCATTGCTAA 69264
|| || ||| | || || ||||| | || || ||||||||||||||| | |||
Sbjct 6493 CGTGAAGACTTTATCACTTGGTGTGATCGTCCCAGATAAATTCTATGAATTAGCACGTAA 6434
Query 69265 AGGTGAATCAATGTATTTGTTTAGCCCTTATGATATCTACAATGAGTATGGAAAACTAAT 69324
| || ||||||| | || || |||||| | | | || || ||||| | | |
Sbjct 6433 AAACCAAGAAATGTATCTATTCAGTCCTTATAGTGTGGAAAAAGAATATGGTGTGCCATT 6374
Query 69325 GTCTGAAATCAACATCACAGAAATGTATGATGAATTAGTTGAAAACAAAAATATCAAGAA 69384
||| | | | ||||| | ||||| | ||||| | ||| ||||||| ||
Sbjct 6373 TTCTTACGTAGATATCACTGCGGAATATGACAATTTAGTCGCAAATCCAAATATCCGTAA 6314
Query 69385 AGATAAAATCTTTGCTCGTGACCTTGAAGAAGAAATGTCTAAACTTATTCAAGAATCAGG 69444
| | |||||| || ||||| | ||| | ||||| |||||| | ||||| || ||
Sbjct 6313 ACAAAAAATCAAAGCCCGTGATTTAGAAAATGAAATCTCTAAATTACAACAAGAGTCTGG 6254
Query 69445 ATATCCATACATCATCAACATTGATACAGCAAACCAAGAAAATGCTGTTGACGGTGTAAT 69504
||||| || |||||||| |||||||| ||||| | |||||| |||| |||||| |||
Sbjct 6253 TTATCCGTATATCATCAATATTGATACGGCAAATCGTGAAAATCCTGTAGACGGTAAAAT 6194
Query 69505 TAAAATGTCTAACCTTTGTTCTGAAATCCTTCAAGTACAATCTCCATCAGAATTGAACTC 69564
|| ||| |||| | |||||||| || | |||||||| | || || | | ||
Sbjct 6193 TATCATGAGTAACTTATGTTCTGAGATTTTACAAGTACAGACACCTTCTGTCATCAATGG 6134
Query 69565 AGACCAAACTTAT-AAGACTATTGGAACTGACGTATCATGTAACCTTGGTTCAACTAATA 69623
| ||| ||| |||| | | || || ||| | ||||||||| | ||||| || || |
Sbjct 6133 CAAGCAAGAATATGAAGAGT-TAGGGACAGACATCTCATGTAACTTAGGTTCTACAAACA 6075
Query 69624 TTACACATCTTATGGAGTCATCTGACTTCGGAAGCTCTGTTAGAACAGCATTTCGTGCAT 69683
| || | ||||| ||||||| || ||||||| | || ||||||||
Sbjct 6074 TCGTCAATTTGATGGATAGCCCTGACTTTGGTCGCTCTGTCCGCACGATGACTCGTGCAT 6015
Query 69684 TAACCTATGTTGCAGATAGCTCTAACATTGAAGAAGTTCCTACTGTTAAGAACGCCAACG 69743
| || ||| | ||||| || ||||||| | ||||| | | | |||| |||
Sbjct 6014 TGACGTATATCACAGATGCTTCAGACATTGACGTGGTTCCACCGATCCAAAACGGGAACA 5955
Query 69744 ATAAGTATCACTCAGTAGGGCTAGGGGCAATGGGACTACATGGATTCCTTGCTAAAAATG 69803
| | |||| | | || || || || |||||||| ||| | |||| ||| |
Sbjct 5954 AATTGAATCATACGATCGGACTTGGTGCCATGGGACTTCATACTTATTTTGCCAAAGAGC 5895
Query 69804 GTATTCTCTATGGTTCTCCTGAATCAATTGAGTTCACAGGTATGTACTTCCAACTCCTAA 69863
|| |||||||| ||||||||||| || || | | || ||| | | |
Sbjct 5894 AAATGGAATATGGTTCCGAAGAATCAATTGATTTTACCAATGTTTATTTCATGTTGTTGA 5835
Query 69864 ACTACTGGACTCTATTTGAAAGTAATCGAATTGCTATTGAACGCAATCAATCTTTCTATA 69923
| |||||||| || |||||||||| || || ||| | || ||| ||| |||
Sbjct 5834 ATTACTGGACACTTGTTGAAAGTAACAATATCGCACGTGAGAGAAAACAAGTCTTCCATA 5775
Query 69924 ACTTTGATAAATCAGAATATGCCAATGGTAAATACTTCAAACGCTATCTACCACGTGTTA 69983
| ||||| ||||||| ||||| | || | || || | ||| | ||| ||
Sbjct 5774 ATTTTGAAAAATCAGCTTATGCAGACGGCACTTATTTTGATAAATATGT--CAC-TGGCG 5718
Query 69984 AATTCAAAAATAATCTTTCTGATACAGTCAAAGAATTGTTTAAAGATGTTGATATTCCAA 70043
||||| || || ||||| ||| | |||||| | | | | |||||| |
Sbjct 5717 AATTCCAACCAAA---ATCTGAACGAGTTGCTGCTTTGTTTGATGGTATCTTTATTCCGA 5661
Query 70044 CTGCACAAGATTGGGTTGACCTACAAGC-TTCAATCGAAGAACATGGTCTATATAACTCT 70102
|||| ||||| |||| | || |||| ||||| || ||||| | ||| ||
Sbjct 5660 CTGCCCAAGACTGGG-AAAACTTGAAGCAAGCAATCATGAAAGATGGTTTGTATCACCAA 5602
Query 70103 TACCGTTTAGCTGTTGCACCTACAGGTTCAATTTCTTATGTAAATGAAGCAACTGCTTCT 70162
| ||||||||||| ||||||| ||||| ||||||||| | ||||| | | ||| |
Sbjct 5601 AATCGTTTAGCTGTAGCACCTAATGGTTCTATTTCTTATATCAATGATACTAGTGCAAGT 5542
Query 70163 ATTCACCCAATCGTACAAAAGATTGAGAAGCGTTCAGAAGGTAAACGTGGTGATGTGTTC 70222
|| || || ||| | | ||| || | || |||| ||| ||| | | |
Sbjct 5541 ATCCATCCGATCACTCGTATGATCGAAGAACGCCAAGAAAAGAAAATTGGGAAAATCTAT 5482
Query 70223 TATCCAGCACCTTATCTTGCA---GAAGGTCTTCCTTATTATGAATCAGCTTATAATATT 70279
|| ||||| |||||| | || ||| | || ||||| || |||||| ||||
Sbjct 5481 TACCCAGCGCCTTATTTATCAAATGAAACAATCCCGTATTACACTTCTGCTTATGATATG 5422
Query 70280 GACCAACGTAGAGTTATTGATATTTATGCCGAAGCTCAGAAACATGTTGACCAATCTCTA 70339
|| |||| ||| || |||||||||||| ||| || |||||||| || ||| |
Sbjct 5421 GATATGCGTAAAGTGATCGATATTTATGCCACAGCACAAAAACATGTGGATCAAGGAATG 5362
Query 70340 TCTATGACTTTATTCATGAATGCAGACCACGGAAAAGATTTGTATGAGTGGAAAATAGGA 70399
|||||| || || ||| | |||| | | ||| |||||| || ||||||
Sbjct 5361 AGTATGACGTTGTTTATGCGTTCAGAAATCCCAGAAGGTTTGTACGAATGGAAA------ 5308
Query 70400 AGCAAAGGAGAAGATTCATTCACTACTCGTGACATTAATATTCTTCGAAATTATGCTTGG 70459
||| || || | || | | || ||||| | |||||||| || | || ||||
Sbjct 5307 --GAAACGACAAAA--CAAT--CCACACGTGATCTAAATATTCTAAGACACTACGCTT-- 5256
Query 70460 TCaaaaaa--aaTAAAATCAATTTACTATGTTCGTAC 70494
|| | ||| ||| ||||| ||||| ||||| |||||
Sbjct 5255 TCCACAAAGGAATCAAATCGATTTATTATGTACGTAC 5219
Score = 104 bits (114), Expect = 2e-17
Identities = 243/366 (66%), Gaps = 3/366 (1%)
Strand=Plus/Minus
Query 76846 TACATCGGCTACAAGTTTCAAATTGGATATAATGAATTAACAGAAGCTGAACAAGAAGAG 76905
|| || ||||| || || ||| | || || || |||||| | |||| |||||||||
Sbjct 4518 TATATTGGCTATAAATTCCAACTAGGTTACAACGAATTACCTGAAGAAGAACAAGAAACA 4459
Query 76906 TTAGAAGAATGGACATTTGATTTACTTGATAAGCTCTATCAAAATGAATTGAAATACACT 76965
|| |||| |||| | | |||| | || | | || |||| ||| | |||||
Sbjct 4458 TTGAAAGACTGGATGTATAATTTGTTATATGAATTATACGAAAACGAAGAGCGCTACACA 4399
Query 76966 GAACTTCTTTATGATGAAGTAGGTTATACTGAGGATGTGAAACAATTCCTCAAATACAAC 77025
||| | |||||| | | |||| || || || || ||| |||| | |||||
Sbjct 4398 GAAGAATTATATGATCCAATCGGTTGGACGGAAGAAGTCAAAACATTCTTACGCTACAAT 4339
Query 77026 GCAGACAAAGCTCTTATGAATCTTGGATTCGACACCTTGTTTGAAGTTGGACGTGAAGAT 77085
||| | ||||| | |||||||| ||| | ||| | | || | | | | |||
Sbjct 4338 GCAAATAAAGCATTGATGAATCTAGGAATGGACCCACTATTCCCTGATACAGCAAACGAT 4279
Query 77086 ATCAATCCACTTGTAATGAATGGTATCTCAACTGAAACAGCTAACCATGATTTCTTCTCA 77145
|||| ||| | || |||||||| ||||| |||| ||| |||||| |||||||||||
Sbjct 4278 GTCAACCCAATCGTGATGAATGGGATCTCTACTGGTACAAGTAACCACGATTTCTTCTCT 4219
Query 77146 GCGGTAGGTAATGGATATCTCCTTGGAGAAGTCGAAGCTATGAAAGACGATGACTACGCT 77205
|| || || || || || | || | || ||||| |||||||| || || |||
Sbjct 4218 CAAGTCGGAAACGGCTACCTATTAGGTAACGTAGAAGCGATGAAAGATGAAGATTAC--- 4162
Query 77206 TTGATT 77211
||||||
Sbjct 4161 TTGATT 4156
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 76136 CATGCGGAATCTTATTCAACAATCTTCTCAACTTTCTGTACTATGAAAGAGATTGATGGA 76195
|||||| || ||| || | |||||| || || ||| | ||||| || || | |
Sbjct 4809 CATGCGAAAAGTTACTCTTCGATCTTCAGTACATTGAATACGAAAAAAGAAATCGAAGAA 4750
Query 76196 ATATTTGAGTGGACTGCAACAAATCCTTATATTGTTAAGAAAACAGAAATCGT-TCAA-G 76253
|| ||||| ||||| || ||||||||| | || ||| | || ||| |||| |
Sbjct 4749 ATCTTTGAATGGACGAATACCAATCCTTATCTACAGAAAAAAGCGGAG--CGTATCAATG 4692
Query 76254 ATATCTACGAAAATGGAACTCCTCTACAAAAGAAAATTGCATCAGTATTCTTGGAATCCT 76313
| |||||| |||| || || || || | || |||||||| || || || ||| |||
Sbjct 4691 AGATCTACAAAAACGGTACGCCGTTAGAGAAAAAAATTGCGAGTGTCTTTTTAGAAACCT 4632
Query 76314 TCCTTTTCTACTCAGGATTCTTTACACCCTTGTATTAT 76351
|| | || ||||||||||||| |||||| | ||||||
Sbjct 4631 TCTTATTTTACTCAGGATTCTATACACCACTTTATTAT 4594
>seq5392
Length=101478
Score = 100 bits (110), Expect = 2e-16
Identities = 149/210 (71%), Gaps = 6/210 (3%)
Strand=Plus/Minus
Query 60680 GATTTATCTACCACAGGAAAATGAAGCAATTAATGATAAGTCAGGATATGCAAACTCTGT 60739
||| ||||||||||| ||||| |||||||| ||||||||| | | ||||||| ||
Sbjct 41851 GATCTATCTACCACAAGAAAACGAAGCAATCAATGATAAGACTGCATATGCAGACAGCAA 41792
Query 60740 AATGATTGCAGAAGCTGATAC---AAATGAACTGTTGAGTTCTGACTTTATTGTAGCTGT 60796
||||||||| |||||||| ||| | ||| || |||||| || | || |
Sbjct 41791 AATGATTGCCTTGGCTGATACAGAAAAAGTACTAGAAAG---TGACTTGATGATCGCACT 41735
Query 60797 CCTAGACGGTGCAACAATTGATGTTGGTGTAGCTAGTGAAATTGGAGTTGCTTATGCTAA 60856
||||||| || || |||| || || ||| ||| || || || || ||||||||
Sbjct 41734 TTTAGACGGATTGACGATCGATGCCGGAGTTGCTTCTGAGATCGGTGTCGCCTATGCTAA 41675
Query 60857 AGGCATTCCAGTTATTGGTCTGTATTCAGA 60886
|||||| || | |||||| | ||| ||||
Sbjct 41674 AGGCATCCCGATCATTGGTTTATATACAGA 41645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415089367661556
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