Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq11297 150 2e-31 >seq11297 Length=12984 Score = 150 bits (166), Expect = 2e-31 Identities = 476/729 (65%), Gaps = 24/729 (3%) Strand=Plus/Minus Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757 |||||| |||| || |||| ||| | |||||||| ||||| | || || | ||||| Sbjct 12367 TCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTG 12308 Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTT 110817 ||| || ||||| || ||||| || || ||||| ||| || || | ||| | | || Sbjct 12307 TGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTT--TT 12250 Query 110818 G--ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTT---CCCAC 110872 | || ||| || || ||| ||||||| | || | || | || ||||| Sbjct 12249 GCTATCTTTTCTTTAAGGACAGCCCAGTCCCAA---AGGTCTGTAGGAGTTTTGTCCCAC 12193 Query 110873 ATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCT 110932 || ||| |||| || | |||||| || ||| || | | | || || | |||| Sbjct 12192 ATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTACTGTACGCACCT 12133 Query 110933 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 110992 | |||||| |||||||| || || || | | | | ||| || |||||||| || Sbjct 12132 TCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATT 12073 Query 110993 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATAC 111051 | ||| | | |||| || || | | || || ||| | ||| | Sbjct 12072 TGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA-TATTCTCATCAACACAAACGC 12014 Query 111052 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 111111 ||| || | || |||||||| | |||||||||||| |||| |||||| || || || Sbjct 12013 ATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGC 11954 Query 111112 AGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 111168 ||| || ||||||||||| ||||| ||| ||||| ||||| || ||||| Sbjct 11953 T---TCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAAT 11897 Query 111169 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 111228 |||||||||||| | | ||||| | ||| ||| || | | |||| ||| || | Sbjct 11896 CTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TTATTTTCA---ACAAACAT 11843 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| || || || || | ||||| || ||| ||||| | ||||| | | Sbjct 11842 GTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCAC 11783 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 || || || || | ||| || ||||| || || | ||| ||||| |||||||| | Sbjct 11782 AACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCT 11723 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||| || |||||||| || | |||||| || || || |||||| || | || | ||| Sbjct 11722 GTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAAT 11663 Query 111409 AGCCTTCCA 111417 | |||||| Sbjct 11662 TGACTTCCA 11654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626775276566400