Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq11297 118 1e-21 >seq11297 Length=12984 Score = 118 bits (130), Expect = 1e-21 Identities = 256/379 (68%), Gaps = 8/379 (2%) Strand=Plus/Minus Query 118514 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573 ||| | ||| |||| || | || || ||||| | ||||| || | |||||||||||| Sbjct 12025 CAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATT 11966 Query 118574 AGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 118633 || | || || ||||||||||| ||| ||||| | |||| ||||| Sbjct 11965 TGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTG 11906 Query 118634 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 118693 || |||| |||||||||||| | | |||| ||| ||| ||| | | |||| Sbjct 11905 AGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TTATTTTCA-- 11851 Query 118694 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753 ||| || | ||| || || || || || || ||||| | ||||| | ||| Sbjct 11850 -ACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGT 11792 Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTG-AACTCTTAATGGTGCCCAAGTTCTTTTGAT 118812 ||| | | || || ||||| ||| ||| || ||||| ||||| | || ||||||| Sbjct 11791 GTATTGCACAACCTCAGTGCA-AAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGAT 11733 Query 118813 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 118872 | |||| ||||||| |||||||| || | ||||||||| || || |||||| ||||| Sbjct 11732 TACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGG 11673 Query 118873 ACTTGAGAATAGCCTTCCA 118891 | | ||| | |||||| Sbjct 11672 CTTCTATAATTGACTTCCA 11654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617197680243040