Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq11297 127 2e-24 >seq11297 Length=12984 Score = 127 bits (140), Expect = 2e-24 Identities = 359/548 (66%), Gaps = 14/548 (3%) Strand=Plus/Plus Query 104711 GCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTC 104770 ||| | ||||| |||||||| || ||||| ||||| || || || |||| |||| Sbjct 11477 GCTTTATGGATACCAGATCTGTTTATGAAAAGAGTAGAAAAGGATGAAGTTTGGAGTCTC 11536 Query 104771 TTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTT 104830 | ||||| | | ||||| ||| | || | | || ||||| ||||||| || Sbjct 11537 ATGTGTCCTCATGATTGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGAAGAACTA 11596 Query 104831 TACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG-GTGCCAGCTGCCGATGTGTG 104889 || | || || || |||||| || | | || || |||| || | || Sbjct 11597 TATGCCAAATATGAAGAAGAAAAACGATTTA-TAAAACAAGTCAGAGCTCAAGAGTTATG 11655 Query 104890 GAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGC 104949 ||| | ||| | | | ||| ||||||||||||||||||||| | || || || || Sbjct 11656 GAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGATGC 11715 Query 104950 CTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTAC 105009 |||||| ||||||||||||||| ||| | || || || || |||||| || || Sbjct 11716 TTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGCAC 11775 Query 105010 AGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGC 105069 || | || ||| || ||||||| ||| ||||| ||||| || || || || Sbjct 11776 TGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGC 11835 Query 105070 TCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGT 105129 || || || ||| || | || | |||| ||| | ||||| | | ||| | Sbjct 11836 ACTTAACATGTTTGT------TGAAAATAACAGATTTAATTTTAAAAAATTAAAAGAAAT 11889 Query 105130 TACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT--- 105186 || || | ||| || |||| |||||| |||||||||| |||||||| || || Sbjct 11890 CACAAAGATTGTAACTCAAAATTTAAACAAAGTTATTGATGTTAATTTTTATCCTGTCCC 11949 Query 105187 TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCT 105246 ||| || | || ||||||||||| | || |||||| | ||||||||||| | Sbjct 11950 TGA---AGCAAAAACTTCAAATATGAGACATAGACCTATTGGTATTGGTGTTCAGGGCAT 12006 Query 105247 CGCGGATG 105254 || |||| Sbjct 12007 GGCAGATG 12014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582093665976160