Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq29762 158 1e-33 seq134144 105 7e-18 >seq29762 Length=2359 Score = 158 bits (174), Expect = 1e-33 Identities = 206/283 (73%), Gaps = 13/283 (5%) Strand=Plus/Minus Query 124494 AACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGAATCGACTGC 124553 ||||| || | |||||||| ||| |||||| | | |||||| || || || |||| Sbjct 1491 AACTCGCGCACGCTGTGCGCCTCGCCCGTGGCTACCACGAAGTCCTCTGGTGCGTCCTGC 1432 Query 124554 TGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCTTGGCA 124613 |||| ||| ||||||||||| | |||||||| ||||| ||||||||||||||| Sbjct 1431 TGCAGCATGAGCCACATGGCCTCCACGTAGTCGCGCGCGTGGCCCCAGTCGCGCTTGCTG 1372 Query 124614 TCCAGGTTTCCGAGCTCGATTGGC-----TTGGCCGTCTTGTTCCACTCCGCCAAACCCA 124668 |||||||| |||||||||| || ||||| ||| || || | ||| Sbjct 1371 TCCAGGTTGCCGAGCTCGAGGTGCGACATGAGGCCGAGGTGT--ATCTTGGCGACGCCCC 1314 Query 124669 GTGTAATCTTGCGCGTCACAAA---CTCGGAACCGCGTCGCTCAGACTCGTGGTTGAACA 124725 | || |||||||||||||| || |||| ||||| ||| | |||||||||||||| Sbjct 1313 GCGTGATCTTGCGCGTCACGAAGTTCTCG---CCGCGGCGCGGACTCTCGTGGTTGAACA 1257 Query 124726 GAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTT 124768 | | || | ||||| ||||| ||||||| |||||||||||| Sbjct 1256 GCACCCCGTTGCACGCGAACATGCCGTACGCCTCGCGGTAGTT 1214 Score = 149 bits (164), Expect = 7e-31 Identities = 205/282 (73%), Gaps = 11/282 (4%) Strand=Plus/Minus Query 158944 AACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGT 159003 |||||||| | |||||||| ||| || || || | ||| ||||||||||| || ||| Sbjct 1491 AACTCGCGCACGCTGTGCGCCTCGCCCGTGGCTACCACGAAGTCCTCTGGTGCGTCCTGC 1432 Query 159004 TGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCA 159063 || |||||||||||||||||||| ||||| || ||||||| ||||||||||||||| Sbjct 1431 TGCAGCATGAGCCACATGGCCTCCACGTAGTCGCGCGCGTGGCCCCAGTCGCGCTTGCTG 1372 Query 159064 TCCATGTTCCCGAGCTCGA----TGAC-TTTTCCAGACTTTTTCCACTCAGCCAGACCGA 159118 |||| ||| |||||||||| ||| | | || | | || || | || Sbjct 1371 TCCAGGTTGCCGAGCTCGAGGTGCGACATGAGGCCGAGGTGT--ATCTTGGCGACGCCCC 1314 Query 159119 GCGTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGA--CTCATGGTTAAACAG 159176 ||||||||||||||||||| || | | ||||| || | || ||| ||||| ||||| Sbjct 1313 GCGTGATCTTGCGCGTCACGAAGTTCTCGCCGCGGCG--CGGACTCTCGTGGTTGAACAG 1256 Query 159177 AATGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATT 159218 | ||| | || ||||||| | || | ||||||||| || Sbjct 1255 CACCCCGTTGCACGCGAACATGCCGTACGCCTCGCGGTAGTT 1214 >seq134144 Length=1001 Score = 105 bits (116), Expect = 7e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 117287 GTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCA 117346 ||| |||| | | | | |||||||||||||| | ||| |||||||| ||||| |||| Sbjct 219 GTCAACGGGGACATGAGTGTGAAAATGTAACGGGGGCTCGCAGCATCTTTGCCGCCAGAC 278 Query 117347 AGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAG 117406 || || ||||| || || |||| || ||||| ||||| | |||||| | |||||| || Sbjct 279 AGGCGGGTACCAAACTGACCACGGGGTTCCAATAGGTTAATGTTGTTCGACCCCACATAG 338 Query 117407 TTTTGAGCCAAGTTGACAATCGT 117429 |||||||||| || || || || Sbjct 339 TTTTGAGCCAGATTCACTATTGT 361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546120993423200