Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq20 286 2e-72
seq48995 129 4e-25
seq32113 122 5e-23
seq16183 104 1e-17
seq22628 95.1 8e-15
seq1641 95.1 8e-15
>seq20
Length=148542
Score = 286 bits (316), Expect = 2e-72
Identities = 365/503 (73%), Gaps = 0/503 (0%)
Strand=Plus/Plus
Query 90834 GCTACTAAAGGAGATATGATGCATATTCAAGAAGAGCTCATGTACGAAAATGATTTATTA 90893
|| || || || ||| ||||||| | || || ||| | |||||||||| || | |
Sbjct 28570 GCCACCAAGGGCGATCTGATGCACGTACAGGAGGAGTTGCTGTACGAAAACGACGTGCTC 28629
Query 90894 AAAATGAATATAGAATTGGTTCATGCACACATGAACAAGTTAAATAATATAATACACGAT 90953
||||||||| | ||| || | || | || || |||||||| || || || | ||||||
Sbjct 28630 AAAATGAATCTCGAACTGATGCACGGCCATATCAACAAGTTGAACAACATGTTTCACGAT 28689
Query 90954 CTTATTGTGTCTATAGCAAAAGTGGATGAACGTTTAATTGGAAATTTAATGAACATATCT 91013
|| | ||||| | || || ||||| |||||||| || || || | ||||||| ||
Sbjct 28690 CTGGTCATGTCTGTGGCCAAGGTGGACGAACGTTTGATCGGCAACCTGATGAACAATTCC 28749
Query 91014 GTATCGAGTGTTTTCTTATCGGACGATACATTTTTATTGATGCCCTGTACTAACCCCCCG 91073
|| ||| | ||||| |||||||| || ||||| ||||||| || || | |||||
Sbjct 28750 GTTTCGTCGATATTCTTGTCGGACGACACGTTTTTGCTGATGCCGTGCACCACTCCCCCC 28809
Query 91074 CAACACACCAGTAATTGTTATAATAATAGTATTTATAGGGAAGGGAGATGGGTGTTTAAT 91133
||||| | || ||||| || ||||| || || | || ||| | ||||||| ||
Sbjct 28810 ACGCACACGAACAACTGTTACAACAATAGCATATACAAAGAGGGGCGGTGGGTGTCCAAC 28869
Query 91134 GAAGACACTTCAGAATGTATCGATTTCAACAATTATAGAGAATTGTCGATCGACGATGAT 91193
| || | ||| | || ||||| || | ||| |||| ||| ||| |||||||||| ||
Sbjct 28870 GTGGATGCGTCACAGTGCATCGACTTTACCAACTATAAAGAGTTGGCGATCGACGACGAC 28929
Query 91194 ATTGAATTTTGGATTCCAACCATAGGCAACACCACATATCACGACAGTTGGAAGGACGCG 91253
||||| |||||| | || ||||| |||||||| || | |||||| || ||||| ||||||
Sbjct 28930 ATTGAGTTTTGGGTGCCCACCATCGGCAACACGACGTTTCACGAAAGCTGGAAAGACGCG 28989
Query 91254 AGCGGTTGGTCATTTGTCGCACAACAAAAAAGTAATTTGATTATGACAATGGAAAATACA 91313
||||| ||||| ||| | ||||||||||||| || | ||| |||||||||| | ||
Sbjct 28990 AGCGGCTGGTCGTTTATAGCACAACAAAAAAACAACCTCATTTCGACAATGGAACAGACC 29049
Query 91314 AAATTCGGTGGTGTCGGAACGAG 91336
|| || || || ||||| || ||
Sbjct 29050 AAGTTTGGCGGCGTCGGCACCAG 29072
Score = 168 bits (186), Expect = 4e-37
Identities = 427/646 (66%), Gaps = 10/646 (2%)
Strand=Plus/Minus
Query 77390 TGTATTTTTGAAGAAACTCAAGATAAACAAATTCACCGACAACATAGATTATCTCATTTT 77449
||| || |||||||||||||| | ||||| |||||||||| ||| || ||| | || ||
Sbjct 87142 TGTGTTCTTGAAGAAACTCAAAACCAACAAGTTCACCGACACCATTGACTATTTGATCTT 87083
Query 77450 ACCAACGTTTGTTTTGTGGGACCACAATTTTCTTGTATTTTTAAACAAAAAGTTTAACAG 77509
||| ||| | |||||||||||||||||| | | ||| | |||||| ||| |||
Sbjct 87082 GCCACACTTTATATTGTGGGACCACAATTTTGTCATTTTTCTCAACAAAGCGTTCAACTC 87023
Query 77510 CAAA----AAATCTGGTGGAATGGTCAATGTATGGGGATGTATGCAAAAAACACCTTTAA 77565
|||| | | | | | |||| | | | | | ||||||||| | |
Sbjct 87022 CAAACACGACAACAGCT----TGGTGGACATTTCGAGCGCCCTGCAAAAAATTAAACTCA 86967
Query 77566 CACAAGGGGTGATAAAAGATTTGATACAGAACAAAAACGGGTACGCGGGCCAATATCTTT 77625
|||| || | || ||||| | |||| ||||||||| ||||| | |||||| | |
Sbjct 86966 CACACGGCATCATCAAAGACCAATTGCAGAGCAAAAACGGTTACGCCGTTCAATATTTGT 86907
Query 77626 ACTCCACATTTCTGAATACGAGTAGTTTTTATGGAAATGTACAATGTTTCAACGGTATCA 77685
| || || ||||| || || || |||| || || || ||||| ||||| |||
Sbjct 86906 ATTCGACGTTTCTCAACACCGCCTCCTTCTATGCCAACGTGCAGTGTTTGAACGGCGTCA 86847
Query 77686 ACGAAATAATCCCTCCGCGCGCTAGTATCGAACGTTATTACGGTCGACCAGTGGATAATG 77745
||||||| | || |||||||| || || | || || ||||| || | |||| || |
Sbjct 86846 ACGAAATCGTTCCGCCGCGCGCCAGCGTCAACCGCTACTACGGCCGGCGGGTGGGCAACG 86787
Query 77746 TTCGCGCATGGAACACACGCCATCCAAACATATCACAATTATCGACTCAATTTTCCATCG 77805
| ||||| |||| ||| || || || ||||| || | || || | || ||
Sbjct 86786 TGCGCGCCTGGACCACGCGACACCCCAACATCAGCCAGCTGAGCACGCAGGTGTCGGACG 86727
Query 77806 TTAAACAAACCGACGATAAAAACGATTGGAATGTAAAAGTGGGTCTGGGCACGTTCGTGG 77865
| | | |||| || | ||||||||| || |||||||| |||||| || ||
Sbjct 86726 TGCGCCTCAACGACTCCAACACCGATTGGAACGTCAAAGTGGGCTTGGGCATATTTCCGG 86667
Query 77866 GTGCCAACAGAGATTGCGACGGCGATAAGGAGGTGATAACATTTTTACCTAAACCTAATT 77925
| ||||||| |||||||| ||||| || | | || || ||| | || |||| ||
Sbjct 86666 GCGCCAACACCGATTGCGATGGCGACAAAAAAATCATCACCTTTCTGCCGCAACCCAACA 86607
Query 77926 CGTTGGTGGAGCTAGAGTCGTTGTTGTATTGTGATCCTAAGTATTCATTT-TTATGTTTT 77984
| | || || |||| || ||||| | || || || || |||| |||| ||
Sbjct 86606 GTCTCATCGACCTGGAGTGTTTATTGTACGGCGACCCGCGGT-TTAATTTCATATGCTTC 86548
Query 77985 GACAAAAACCGTCTTACGTTCGTACCACAACAAGTCGTGTATCTGT 78030
||||| || || || | ||||| | |||||| | |||||||
Sbjct 86547 GACAAGAATCGACTCAGCTTCGTGTCCCAACAAATTTACTATCTGT 86502
Score = 95.1 bits (104), Expect = 8e-15
Identities = 163/234 (70%), Gaps = 12/234 (5%)
Strand=Plus/Minus
Query 93507 TAATCTTTAGCGTACACGTCACGCACGTACAACACATCGTCCACCTTATCGTATACCAGT 93566
||||| | ||||||||||| ||| | |||||||||||||| ||| ||||| ||||||
Sbjct 96910 TAATCGCTGGCGTACACGTCGCGCGCAAACAACACATCGTCCTGCTTGTCGTACACCAGT 96851
Query 93567 TGTATGGCTCTATTCACCGCCTTCTCGTCATCGTAATTTCCATATAGAAACATTCG-TTT 93625
|| ||||| | ||| | |||||| | ||| || || || | |||||| || ||
Sbjct 96850 TGGATGGCACGATTGATGTGCTTCTCCTGGTCGACGTTGCCGTACAAAAACATACGCTTG 96791
Query 93626 CATTTTCTTCTCTCGTGCATACTGTTTATCATAAAAGTTATGAATTAAAATGTTATTATT 93685
|| | | | ||| || |||| || ||||| || || |||||||| || ||
Sbjct 96790 CAATGTTT-------TGCGTATAGTTTGTCGTAAAAATTGTGCGCCAAAATGTTGTTGTT 96738
Query 93686 CATCATTATATTGGGAAA--CGAAAAATGTCGACCTTCAATGATAAACGTGCCC 93737
||| | || |||||||| || ||| ||||| || | || |||||||||
Sbjct 96737 CATGAGAATGTTGGGAAAGCTGAGAAA--CCGACCGTCCAACATGAACGTGCCC 96686
Score = 91.5 bits (100), Expect = 9e-14
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 40939 TGTGGGAACGAGGCTATGAGGATCATTACACATTGGGTCAACAGCTTAGTATCAGGATGA 40998
||||||| |||||||| ||||| ||||||| | || |||||| | || || | || |
Sbjct 101857 TGTGGGAGCGAGGCTACGAGGACAATTACACGCTCGGCCAACAGTTGAGCATTCGCATCA 101916
Query 40999 CTACCAATCTAATACAGAGCGGGTTAGATTTTAAACACCA 41038
| ||||| || |||||||||||||| ||||||||||| ||
Sbjct 101917 CCACCAAACTGATACAGAGCGGGTTGGATTTTAAACATCA 101956
>seq48995
Length=1108
Score = 129 bits (142), Expect = 4e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| ||||| | || ||||| | ||| ||||| |||||||| || |||||
Sbjct 446 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGAC 387
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||| ||| | |||||||||||||| || || || || | | ||||||||| || ||
Sbjct 386 AATGTGCGCCCATCTTCAAGTTGTTTTCCAGCGAAAATGAGCCTCTGTTGGTCTGGGGGA 327
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||| ||| ||| ||||| |||||| | ||||||||| ||| ||
Sbjct 326 ATCCCCTCCTTATCT-TGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAAC 268
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || |||||||| || | ||||| |||||||| |||||
Sbjct 267 TTCAAGAGTAATAGTTTTACCAGTAAGAGTTTTTACAAAAATTTGCAT 220
>seq32113
Length=13445
Score = 122 bits (134), Expect = 5e-23
Identities = 169/234 (72%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||||||||| ||||| || ||||| || |||||||| ||||| || |||
Sbjct 7564 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAA 7623
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||| | ||| || || || || || ||||| ||||| || || ||
Sbjct 7624 AGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 7683
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| | ||| || | ||| || || || ||
Sbjct 7684 ATGCCTTCCTTGTCT-TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAAC 7742
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712
||||| || || |||||||| || | ||||||||||| |||||||| |||||
Sbjct 7743 TTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGAT 7796
Score = 98.7 bits (108), Expect = 6e-16
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | ||| ||||| || ||||| || || ||||||||||| |||||||| ||
Sbjct 7336 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 7395
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||| || | ||||| |||||||| || ||||| || | | |||||| || || ||
Sbjct 7396 AATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGA 7455
Query 34600 ACTCCCTCCTTGTCTGTGATCTTT 34623
| ||||| |||||| |||||||
Sbjct 7456 ATACCCTCTTTGTCTTGGATCTTT 7479
Score = 89.7 bits (98), Expect = 3e-13
Identities = 155/221 (70%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||| || || || || ||| || ||||| || ||||| || | || ||
Sbjct 6661 AGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGA 6720
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| | ||| || || ||||| || | ||||||||||| || || | ||||||
Sbjct 6721 CCATCTTCCAATTGCTTTCCAGCAAAAATGAGGCGCTGTTGGTCTGGGGGGATGCCCTCC 6780
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC--TTCGCTCTCCACTTCCACG 34665
|| ||| || ||| | ||| || | ||||||||| | | ||| ||||||| |
Sbjct 6781 TTATCT-TGTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCT--ACTTCCAGG 6837
Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || || || ||||| ||||| || |||||
Sbjct 6838 GTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 6878
Score = 87.8 bits (96), Expect = 1e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | || ||||| | ||| || ||||| |||||||| || ||
Sbjct 5968 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 6027
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || || | |||||||| || || |||| |||||||||||| || ||
Sbjct 6028 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCGAAGATTAGACGCTGTTGGTCTGGGGGA 6087
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| |||||||||||| ||||||
Sbjct 6088 ATGCCCTCCTTGTCTTGGATCTT 6110
>seq16183
Length=3749
Score = 104 bits (114), Expect = 1e-17
Identities = 159/224 (71%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||||||| || || | ||| ||||| || || ||||| ||||| || || |||
Sbjct 862 AGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGCGTGCGC 921
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| ||||| || ||||| || || | | ||||| || || || | || |||
Sbjct 922 CCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCC 981
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGT 34667
|||||| |||||| |||| | ||||| || ||| |||||||||| ||
Sbjct 982 TTGTCTTGTATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCT-TCCACTTCCAATGT 1040
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|| ||||| || ||||| ||||| || || || |||||| |||
Sbjct 1041 GATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGATGA 1084
>seq22628
Length=16716
Score = 95.1 bits (104), Expect = 8e-15
Identities = 126/173 (73%), Gaps = 4/173 (2%)
Strand=Plus/Plus
Query 46826 GGATGGCCCGTCAC--TTTTATTACACCCGAAGTGATGGCACGTAACGGATTTTATTATC 46883
|||||||||||||| ||||||| ||||||| | || | || || || |||||||
Sbjct 16456 GGATGGCCCGTCACATTTTTATT--ACCCGAATCACTCGCGAGGAATGGCTTCTATTATC 16513
Query 46884 TTGGAAGAGGTGATGAAGTTCGATGCGCCTTTTGCAAGGTTGAGATCATGCGTTGGGAAG 46943
| || | || |||||||| || ||||| ||||| || || || || ||| |||| |
Sbjct 16514 TGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATTATGAAATGGGTTG 16573
Query 46944 AGGGTGATGATCCTGCCGAAGACCATAAACGTTGGGCTCCTCAGTGTCCGTTC 46996
||| || ||||| ||| | ||||| | || ||||| || ||||| || |||
Sbjct 16574 CGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAGTGCCCTTTC 16626
>seq1641
Length=3631
Score = 95.1 bits (104), Expect = 8e-15
Identities = 162/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 34472 AATCGTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTAT 34531
||| || || || | ||| || | ||| | ||| | ||| |||||||||||||| |
Sbjct 2392 AATAGTTACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGT 2333
Query 34532 AATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGT 34591
| || || | ||| || | ||||| ||||||||||| ||||| || ||||| || ||||
Sbjct 2332 AGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGT 2273
Query 34592 CCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGC 34651
| || || | || ||||| ||| ||| || ||||| | || || || |
Sbjct 2272 CTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGG 2213
Query 34652 TCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| || || | ||| || |||||||| || | || || || ||||| |||||
Sbjct 2212 CCTCGACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 2158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314115555075572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |