Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_028700.1
Length=37976
Score E
Sequences producing significant alignments: (Bits) Value
seq1464 199 1e-46
seq7607 172 1e-38
seq14859 87.8 4e-13
>seq1464
Length=66918
Score = 199 bits (220), Expect = 1e-46
Identities = 236/317 (74%), Gaps = 2/317 (1%)
Strand=Plus/Plus
Query 9195 TGATTAATAATGTAGTACTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAG 9254
|||||||||| || ||||||||||| || |||| || || |||| | || ||||||
Sbjct 17855 TGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACAT 17914
Query 9255 CGAGTCAAGTAGCTGTAGCTACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAG-CAA 9313
| ||| |||||||| |||||||| | || || || || | | || | ||| |||
Sbjct 17915 CAAGTGGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTA-ACTTCACGAGCCAA 17973
Query 9314 AACGGGGAGAGAGAAGCAGATTTCATTAATTGTGTTATCTGGCGACAGTCTGCTGAAAAT 9373
||||| | | || || ||||| ||||||||||| || |||||| | || || ||||
Sbjct 17974 AACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACA 18033
Query 9374 TTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT 9433
|||| |||| || | ||||| || | | || || || ||||||||||| || |||
Sbjct 18034 CTAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGT 18093
Query 9434 AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGAGAACTTC 9493
|| || || ||||||||||||||||| || ||||||||||| ||||| || ||||||
Sbjct 18094 TCTTATGATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTC 18153
Query 9494 CAAATGTTGGAAAGTCG 9510
||| | |||||||||||
Sbjct 18154 CAATTATTGGAAAGTCG 18170
>seq7607
Length=81728
Score = 172 bits (190), Expect = 1e-38
Identities = 285/409 (70%), Gaps = 7/409 (2%)
Strand=Plus/Minus
Query 11895 AAAATTTTAGATGCTTGTTGTGGAAGTCGCCTATTTTGGTTTGATAAAAACGAACCTCAC 11954
||||| |||||||| ||||| |||||||| | || ||||| |||||| | |
Sbjct 76215 AAAATATTAGATGCGTGTTGCGGAAGTCGTTTGTTCTGGTTCGATAAAGATTGTAGTTTT 76156
Query 11955 ACAACTTTTATGGACGTCAGACAAGAAAAATTTGAGATGCACGGCaaaaaaaTCAATGTC 12014
|||| | |||||| | ||| ||||| | | ||||| || || || |||||||||||
Sbjct 76155 GCAACGTATATGGATATAAGAGAAGAAGAGTACGAGATCCATGGAAAGAAAATCAATGTG 76096
Query 12015 AACCCTGATGTAATTGGTGATTTTCGTGATATGCCTTTTGAAAGTAATAGCTTTA--ACC 12072
|| || ||||| | | ||| ||| | || || |||||||||| |||| |||| |
Sbjct 76095 AAACCAGATGTTGTAGCTGACTTTAGAGACATACCTTTTGAAAATAATG--TTTACGATT 76038
Query 12073 TGGTTGTCTTCGACCCGCCACACTTAAAATATGTTGGACAAAACTCAATTATGAAAGCTC 12132
| ||||| || || || ||||| || |||| | ||| || || ||||||||||||| |
Sbjct 76037 TAGTTGTATTTGATCCACCACATTTGAAATGGGCTGGCCAGAATTCAATTATGAAAGGAC 75978
Query 12133 AGTATGGCCAACTTGATAAAGAAAACTGGAAAGAAGATATTTCAAAAGGTTTCGAAGAGT 12192
| || || || || || ||||| | |||| ||||||||| | | ||| | |||||
Sbjct 75977 AATACGGACAGCTAGACAAAGATACCTGGCCAGAAGATATAAAACAGGGTATGTCAGAGT 75918
Query 12193 GTATGAGAGTTCTAAAAGTAGGAGGAACTTTAGTTTTTAAATGGTCTGATTGCCAGGTTA 12252
||||| | ||| |||| ||||| || |||| |||||| ||| |||||| |
Sbjct 75917 GTATGCGTGTTTTAAAGCCCAACGGAACATTGATTTTCAAATGGAATGAGAACCAGGTAA 75858
Query 12253 ATGTAAGAGAAGTTTTGTCAGCAATT---CCATTTAAACCGCTTTTTGG 12298
| | | ||| ||||| | ||||| ||||| | ||| | |||||
Sbjct 75857 AACTCAAAGATGTTTTAAAATCAATTGAACCATTCAGACCTTTGTTTGG 75809
>seq14859
Length=68005
Score = 87.8 bits (96), Expect = 4e-13
Identities = 128/179 (72%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 9194 ATGATTAATAATGTAGTACTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATAC- 9252
||||||||||| || ||| |||| || || | || |||||| |||| | | ||||
Sbjct 19978 ATGATTAATAACGTTGTATTAGTGGGACGGTTAACTAAGGACCCAGACATAAGAAATACT 20037
Query 9253 -AGCGAGTCAAGTAGCTGTAGCTACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGC 9311
| | || | | | | |||| || ||||| ||||| ||||| | |||||||| |
Sbjct 20038 CAACAAGGAACGACGATC--GCTAGTTTTACACTAGCGGTCAACCGTAACTTTAAAGACC 20095
Query 9312 AAAACGGGGAGAGAGAAGCAGATTTCATTAATTGTGTTATCTGGCGACAGTCTGCTGAA 9370
|||| || || | ||||||||||| |||||||||||| ||||| || | ||||||
Sbjct 20096 AAAATGGAAAGCGTGAAGCAGATTTTATTAATTGTGTTGCTTGGCGTAAGACAGCTGAA 20154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 121170815861904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |