Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq1361 140 3e-28 >seq1361 Length=62553 Score = 140 bits (154), Expect = 3e-28 Identities = 426/651 (65%), Gaps = 18/651 (3%) Strand=Plus/Minus Query 42654 AATATCAGGGTACATTCTTTTAGCCGAACATTCTAGAGCTAAtttttttATAGAATAATT 42713 |||||| |||||||||||||| | | |||||||| ||||||| ||| || ||| || Sbjct 32809 AATATCTGGGTACATTCTTTTTGTGGCACATTCTAAGGCTAATTGTTTGATGTCATAGTT 32750 Query 42714 AGGGTCTTCAGGTTTTAAATTAATTCCTTCTTCAATAAAGAAGACTAATTTTGGAAATAT 42773 || || ||||| | ||| ||||| |||| | || | |||||||| || || Sbjct 32749 TGGATCAGTTGGTTTAAGATTGATTCCGTCTTTTAGTGTAAATATCAATTTTGGGAAGAT 32690 Query 42774 TGCTGTGACTCCATCTTTGCCTAATCCTTTAATTCTATTTTTTAAAATAGCTTCTTGAAT 42833 ||||| | || |||||||||| || |||| ||| |||||| |||| ||| || Sbjct 32689 CGCTGTCCGTTTCTCACTGCCTAATCCATTGATTCGGATTTGTAAAATCGCTTTTTGGAT 32630 Query 42834 AACA-GTGCCCATCCATGTGGTTGAAGTACCAAAACTAATTGTTACAAAAGGAGTTTGCC 42892 | || | | | || | || ||| || | | || |||||| ||||| | Sbjct 32629 TTCTCGTTCAAACCAATTTTTACCTAG-ACCGAAGCCGAGTGAAGTAAAAGGCGTTTGTC 32571 Query 42893 CATTAGAACTAAAAAGTGTATTAATTTCGTATTCATAAGCCTGGAAAGCATCATAAACAT 42952 | || ||| | ||||||||||| || || ||||| || || | |||||| ||| || Sbjct 32570 CGTTGGAAGTGAAAAGTGTATTGATCTCATATTCCAAACTTTGCATGGCATCAAAAATAT 32511 Query 42953 CTTTTTCTGTTTT--CTTCATGGCATA---TTTGTCAAAATCAGATATGCC---CCATTC 43004 |||||| ||||| ||| | ||||| || | || | | || | |||||| Sbjct 32510 CTTTTTTGGTTTTTGCTT--TTGCATAGGCTTCTTGCCGTTCGGGTGTGTCGATCCATTC 32453 Query 43005 AAAAGCTTCATTCAGATGTTTTTGATAAGTTGCTTCTACATATGGTTCTAGTACAACATC 43064 || ||| | | |||||||| ||| || || | || | || | || | |||| Sbjct 32452 TTTGGCATCAATTAAATGTTTTTTGTAATTTAATTGTGCAAAAGGAGCAAGCAATTCATC 32393 Query 43065 AAC---ATTAGCAAAAGTTGTACCACCATATTGATGAGAAGCCACTTGGGCCGTAATCTG 43121 || ||| || | || |||||||| ||| || || | ||| | ||||| Sbjct 32392 TGTGCGATCGGCAGAACAT---CCGCCATATTGGCTAGATGCAACATTGGCAATGATCTG 32336 Query 43122 TGCCATAATTGCACAAGCGACTCCAATAGATTTTGGAGTTTCTATTTCAGCATTGCCAAG 43181 || || ||| || | || |||||||| | ||| | ||| ||||| |||| Sbjct 32335 TGAAATCTGTGCCGTTGCTGTTTGGATCGATTTTGGTGATTCGACTTCTGCATTTCCAAT 32276 Query 43182 CTTAAACCCATTTTCAAACATACCTTTTAAATCGACTAAACAACAATTTGTAAAAGGCAG 43241 |||||||| || | ||||||||||| || |||| ||||| |||||||| | || Sbjct 32275 TTTAAACCCGTTGTTCAACATACCTTTGAAGTCGATCAAACAGCAATTTGTCATTGGTGT 32216 Query 43242 AGATACACTATAATCTAAATCATGGTAATGTATAACTCCTTTGTCATGGGC 43292 | | | ||||| | |||||| ||||| ||| | ||||| | |||||| Sbjct 32215 ATACGGATGGTAATCGAGATCATGATAATGGATATCGCCTTTTTGATGGGC 32165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517199782251360