Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_028764.1 Length=49316 Score E Sequences producing significant alignments: (Bits) Value seq14859 233 6e-57 >seq14859 Length=68005 Score = 233 bits (258), Expect = 6e-57 Identities = 406/582 (70%), Gaps = 20/582 (3%) Strand=Plus/Plus Query 903 TGGTCAAGGAGTAGGTAAAACTGGATTAGAAAGCATT-GCAACTGTATGGTATTTAAGCA 961 ||| ||||| || || ||||| | ||||||| ||| |||| | |||| ||||| Sbjct 29701 TGGACAAGGTGTTGGGAAAACAGCATTAGAA-GCAGGAGCAATACTTTGGTTTTTAACTT 29759 Query 962 CTAGACCTTTTCCGAAAGTAGTTGCTACAGCTCCAAC-ACGACAACAATTATATGACGTA 1020 | |||| | | ||||| |||||||||| ||||| | || ||||| | || || ||| Sbjct 29760 GTCGACCATACGCTAAAGTGATTGCTACAGCGCCAACCATGA-AACAACTTTACGATGTA 29818 Query 1021 CTATGGGCTGAAATAGCTAAATGGCTAAGTAATAGCAAGGTTGAGAAGCTACTTGAGTGG 1080 || ||||| ||| ||||||||||| ||| | ||||| | | | || |||| ||||| Sbjct 29819 CTTTGGGCGGAAGTAGCTAAATGGTTAAATGATAGCTTGATCAAAAACTTACTGAAGTGG 29878 Query 1081 ACTAAAACAAAAGTGTATATGAAAGGCTTTGAAGAAAGATGGTGGGCTACAGCTAGAACA 1140 || || || ||| | |||||| || | || | |||| ||||||||||||||| Sbjct 29879 ACAAAGACCAAAATTTATATGGTTGGTGATTCTGAGCGTTGGTTTGCTACAGCTAGAACA 29938 Query 1141 GCAGTAAAGCCCGAGAATATGCAAGGTTTTCATGAAGATTATATGTTATTTGTTGTTGAT 1200 ||| ||||| || ||||||||||| ||||||||||| ||||||| ||||||| ||| Sbjct 29939 GCAACGAAGCCAGAAAATATGCAAGGGTTTCATGAAGACCATATGTTGATTGTTGTAGAT 29998 Query 1201 GAAGCTTCGGGAGTTGCTGACCCCATTATGGAAGCTATATTGGGAACATTATCAGGTGCA 1260 |||||||| || || |||| || |||||||||||||| | || || |||||||| Sbjct 29999 GAAGCTTCTGGTGTATCTGATCCAATTATGGAAGCTATTCTTGGTACGCTATCAGGTTTT 30058 Query 1261 GAAAATAAGCTTCTTTTATGCGGAAACCCAACTAGAACGAGTGGAACG----TTTTACGA 1316 || |||||||| | | || || ||||||| || | | ||| | |||||||| Sbjct 30059 GATAATAAGCTATTGATGTGTGGGAACCCAAATAATA----TTGAAGGTGTCTTTTACGA 30114 Query 1317 TAGCCATAATAGAGACAGAGATTTATATAAAACATTTAAAGTATCTTCTTTAGATAGCCC 1376 | ||| ||| |||| | ||| ||| | | |||||||||| || ||||| Sbjct 30115 TTCCCACAATTCAGACCGTGATAAATACAGAGTTCATAAAGTATCTAGTTACGATAGTAA 30174 Query 1377 TAGAACATCAAAAGATAATATTGAAATG----CTAAAAAGAAAGTACCATGAAGGTTCTG 1432 | ||| ||||| || || |||||| ||||||| | | | | ||| | || Sbjct 30175 ACGCACAAACAAAGACAACATAGAAATGATTCTTAAAAAGTATGGA-AAAGAAAGCGATG 30233 Query 1433 ACCCTTGGCGTGTTAGAGTTCTTGGAGAATTTCCAAAAGGTG 1474 || ||||| | || ||||||||||||| ||||||| Sbjct 30234 TTGCT---CGTGTCCGTATTTTTGGAGAATTTCCTAAAGGTG 30272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157389832464624