Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_028821.1
Length=40670
Score E
Sequences producing significant alignments: (Bits) Value
seq1616 109 1e-19
seq1464 96.9 9e-16
seq14859 80.6 7e-11
>seq1616
Length=186323
Score = 109 bits (120), Expect = 1e-19
Identities = 323/490 (66%), Gaps = 10/490 (2%)
Strand=Plus/Plus
Query 22145 AATATATCCTT--TGCGTAAGGCCATTCATCTGTATACATAGGCGCATTCAAGTTAAAAC 22202
||||| ||||| | ||| || ||||| || ||||||| || |||| || ||||||
Sbjct 184175 AATATGTCCTTCATACGT--GGATATTCAACTCTATACATGGGGACATTTAAATTAAAAT 184232
Query 22203 CAGCAGTAGAGATAATGAATATTAATG-ATTGCAT-TAAGTTACCTTGACCAGATTGGAT 22260
|| ||||| ||||| || ||||| | ||| || ||| | |||||||| |||| ||
Sbjct 184233 TGGCGGTAGAAATAATTAAAATTAACGGATT--ATCTAATTGTCCTTGACCTGATTCAAT 184290
Query 22261 AAGTTCTAGCATTTCATTCGTTTTAGCCGCGTGATACTCATCGACTACCGCTAAAAAAGG 22320
| ||| | |||||||| ||||| | || ||||||||| | || | | | ||||
Sbjct 184291 CAATTCCATCATTTCATCTGTTTTTGATGCTCCATACTCATCAAACACTCCAATATAAGG 184350
Query 22321 TTCGAAACCATCAACCGCTCCAGTATCACGAGATAAAGGGCGAATATACGAGCCATCTTT 22380
|| || ||||||| || || || || ||| | | ||| || || ||||| |
Sbjct 184351 CTCAAATCCATCAATTGCACCTGTTTCTTTAGAAAGAACAGTAATGTATGATTCATCTCT 184410
Query 22381 TGTATGCGTAAGTAATTCACGTACCTTTTTAACGTCTTTTTTGAGTTCTGGTACTTTAGA 22440
| || |||| || || || || |||| ||||| | | || || ||||||
Sbjct 184411 TAGATTTTTAAGAAACTCTCGAACACGTTTAGTTGCTTTTCTAATATCAGGATATTTAGA 184470
Query 22441 TACGAAATACATC-AACTGTTTCGCTACCATATTAAATACGATACTTGCTTGAGATTTGT 22499
| ||| |||| || || ||| | |||| | |||| | ||||| ||||| ||| |
Sbjct 184471 TCTTAAAG-CATCTAATTGCTTCCTTGCCATGTCAAATGCAATACTCGCTTGTTTTTTAT 184529
Query 22500 CATTGGCTGCAGTAAACATTTGTCGACCTTCTTTAGGCTCTTTATCAAATAAGAAAGCAT 22559
|||| || | | ||| ||||| | || | | || | |||| ||||||| || | |
Sbjct 184530 CATTAGCAGTACAAAATATTTGCCTACTTAATGCGGGATTTTTAGCAAATAAAAATTCGT 184589
Query 22560 ATAATACTAAGCCACTTACTAGAATGGACTTACCTTGTTTACGTGCCATAGATATAAAAG 22619
| | || | ||| || | || | ||| || | || | || | | ||||||||
Sbjct 184590 ACAGAACAATACCAGCTATCAATATAGTCTTCCCATTCTTTCTGGCAACACTTATAAAAG 184649
Query 22620 CTTTTTTAAA 22629
|||| |||||
Sbjct 184650 CTTTCTTAAA 184659
>seq1464
Length=66918
Score = 96.9 bits (106), Expect = 9e-16
Identities = 206/305 (68%), Gaps = 2/305 (1%)
Strand=Plus/Minus
Query 28150 AATTGAACGCTATCTGCAACTACTTCAGTCACAAATATTCGACGACCTTCTTGATTTTCA 28209
||||| | | | || ||||||||||| || || | | || | |||| |||||| |||
Sbjct 18158 AATTGGAAGTTTTCAGCAACTACTTCTGTTACGTACACACGTTGTCCTTGTTGATTATCA 18099
Query 28210 TAACTGCATGATTGAATTCGACCATCAACGCCTGCTAATTTTCCTTTCGATAAATAG-TT 28268
||| | | |||||| |||||| || ||| | ||||||| | |||| ||
Sbjct 18098 TAAGAACGCGTTTGAATACGACCAGTTACACCTAAAAGAGTTCCTTTATGTGCATAGTTT 18039
Query 28269 GTTAACATTGTGTGCTTGTTTTCTAAATACGATAATATTGATAAAATCTGCTTCACGTTC 28328
| || || | |||| ||||| | | | | ||| |||||||| || ||||| |
Sbjct 18038 GCTAGTGTT-TCTGCTGATTTTCGCCAAATCACACAATTAATAAAATCCGCCTCACGGTT 17980
Query 28329 ACCCTGTGCGTTTGTGAAATTACGATTAACTGCTAGTGTGAAAGTTGCAACATCAATTCC 28388
|| | | | | ||||| |||||||| || |||| ||||| ||||| ||| || | ||
Sbjct 17979 GCCGTTTTGGCTCGTGAAGTTACGATTGACAGCTAAAGTGAACGTTGCTACAGCAGTGCC 17920
Query 28389 ACTTTGAGTTGTTCTAAATTCAGGATCTTTAGTTAAACGACCTACTAATACGACTCTGTT 28448
|||| || || || || |||||||| || | ||| || |||| ||| || | ||
Sbjct 17919 ACTTGATGTATATCGTAAATCTGGATCTTTTGTCAGACGTCCAACTAGTACAACGTTATT 17860
Query 28449 AATCA 28453
|||||
Sbjct 17859 AATCA 17855
>seq14859
Length=68005
Score = 80.6 bits (88), Expect = 7e-11
Identities = 110/151 (73%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 28305 ATTGATAAAATCTGCTTCACGTTCACCCTGTGCGTTTGTGAAATTACGATTAACTGCTAG 28364
||| ||||||||||||||||| | || | | || | | || ||||| || || |||||
Sbjct 20127 ATTAATAAAATCTGCTTCACGCTTTCCATTTTGGTCTTTAAAGTTACGGTTGACCGCTAG 20068
Query 28365 TGTGAAAGTTGC-AACATCAATTCCACTTTGAGTTGTTCTAAATTCAGGATCTTTAGTTA 28423
||| ||| | || | | || |||| |||||| |||| | || || || |||||||
Sbjct 20067 TGTAAAACTAGCGATCGTC-GTTCCTTGTTGAGTATTTCTTATGTCTGGGTCCTTAGTTA 20009
Query 28424 AACGACCTACTAATACGACTCTGTTAATCAT 28454
| || || |||||||| || | ||||||||
Sbjct 20008 ACCGTCCCACTAATACAACGTTATTAATCAT 19978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 129775227742656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |