Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_028821.1 Length=40670 Score E Sequences producing significant alignments: (Bits) Value seq1616 109 1e-19 seq1464 96.9 9e-16 seq14859 80.6 7e-11 >seq1616 Length=186323 Score = 109 bits (120), Expect = 1e-19 Identities = 323/490 (66%), Gaps = 10/490 (2%) Strand=Plus/Plus Query 22145 AATATATCCTT--TGCGTAAGGCCATTCATCTGTATACATAGGCGCATTCAAGTTAAAAC 22202 ||||| ||||| | ||| || ||||| || ||||||| || |||| || |||||| Sbjct 184175 AATATGTCCTTCATACGT--GGATATTCAACTCTATACATGGGGACATTTAAATTAAAAT 184232 Query 22203 CAGCAGTAGAGATAATGAATATTAATG-ATTGCAT-TAAGTTACCTTGACCAGATTGGAT 22260 || ||||| ||||| || ||||| | ||| || ||| | |||||||| |||| || Sbjct 184233 TGGCGGTAGAAATAATTAAAATTAACGGATT--ATCTAATTGTCCTTGACCTGATTCAAT 184290 Query 22261 AAGTTCTAGCATTTCATTCGTTTTAGCCGCGTGATACTCATCGACTACCGCTAAAAAAGG 22320 | ||| | |||||||| ||||| | || ||||||||| | || | | | |||| Sbjct 184291 CAATTCCATCATTTCATCTGTTTTTGATGCTCCATACTCATCAAACACTCCAATATAAGG 184350 Query 22321 TTCGAAACCATCAACCGCTCCAGTATCACGAGATAAAGGGCGAATATACGAGCCATCTTT 22380 || || ||||||| || || || || ||| | | ||| || || ||||| | Sbjct 184351 CTCAAATCCATCAATTGCACCTGTTTCTTTAGAAAGAACAGTAATGTATGATTCATCTCT 184410 Query 22381 TGTATGCGTAAGTAATTCACGTACCTTTTTAACGTCTTTTTTGAGTTCTGGTACTTTAGA 22440 | || |||| || || || || |||| ||||| | | || || |||||| Sbjct 184411 TAGATTTTTAAGAAACTCTCGAACACGTTTAGTTGCTTTTCTAATATCAGGATATTTAGA 184470 Query 22441 TACGAAATACATC-AACTGTTTCGCTACCATATTAAATACGATACTTGCTTGAGATTTGT 22499 | ||| |||| || || ||| | |||| | |||| | ||||| ||||| ||| | Sbjct 184471 TCTTAAAG-CATCTAATTGCTTCCTTGCCATGTCAAATGCAATACTCGCTTGTTTTTTAT 184529 Query 22500 CATTGGCTGCAGTAAACATTTGTCGACCTTCTTTAGGCTCTTTATCAAATAAGAAAGCAT 22559 |||| || | | ||| ||||| | || | | || | |||| ||||||| || | | Sbjct 184530 CATTAGCAGTACAAAATATTTGCCTACTTAATGCGGGATTTTTAGCAAATAAAAATTCGT 184589 Query 22560 ATAATACTAAGCCACTTACTAGAATGGACTTACCTTGTTTACGTGCCATAGATATAAAAG 22619 | | || | ||| || | || | ||| || | || | || | | |||||||| Sbjct 184590 ACAGAACAATACCAGCTATCAATATAGTCTTCCCATTCTTTCTGGCAACACTTATAAAAG 184649 Query 22620 CTTTTTTAAA 22629 |||| ||||| Sbjct 184650 CTTTCTTAAA 184659 >seq1464 Length=66918 Score = 96.9 bits (106), Expect = 9e-16 Identities = 206/305 (68%), Gaps = 2/305 (1%) Strand=Plus/Minus Query 28150 AATTGAACGCTATCTGCAACTACTTCAGTCACAAATATTCGACGACCTTCTTGATTTTCA 28209 ||||| | | | || ||||||||||| || || | | || | |||| |||||| ||| Sbjct 18158 AATTGGAAGTTTTCAGCAACTACTTCTGTTACGTACACACGTTGTCCTTGTTGATTATCA 18099 Query 28210 TAACTGCATGATTGAATTCGACCATCAACGCCTGCTAATTTTCCTTTCGATAAATAG-TT 28268 ||| | | |||||| |||||| || ||| | ||||||| | |||| || Sbjct 18098 TAAGAACGCGTTTGAATACGACCAGTTACACCTAAAAGAGTTCCTTTATGTGCATAGTTT 18039 Query 28269 GTTAACATTGTGTGCTTGTTTTCTAAATACGATAATATTGATAAAATCTGCTTCACGTTC 28328 | || || | |||| ||||| | | | | ||| |||||||| || ||||| | Sbjct 18038 GCTAGTGTT-TCTGCTGATTTTCGCCAAATCACACAATTAATAAAATCCGCCTCACGGTT 17980 Query 28329 ACCCTGTGCGTTTGTGAAATTACGATTAACTGCTAGTGTGAAAGTTGCAACATCAATTCC 28388 || | | | | ||||| |||||||| || |||| ||||| ||||| ||| || | || Sbjct 17979 GCCGTTTTGGCTCGTGAAGTTACGATTGACAGCTAAAGTGAACGTTGCTACAGCAGTGCC 17920 Query 28389 ACTTTGAGTTGTTCTAAATTCAGGATCTTTAGTTAAACGACCTACTAATACGACTCTGTT 28448 |||| || || || || |||||||| || | ||| || |||| ||| || | || Sbjct 17919 ACTTGATGTATATCGTAAATCTGGATCTTTTGTCAGACGTCCAACTAGTACAACGTTATT 17860 Query 28449 AATCA 28453 ||||| Sbjct 17859 AATCA 17855 >seq14859 Length=68005 Score = 80.6 bits (88), Expect = 7e-11 Identities = 110/151 (73%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 28305 ATTGATAAAATCTGCTTCACGTTCACCCTGTGCGTTTGTGAAATTACGATTAACTGCTAG 28364 ||| ||||||||||||||||| | || | | || | | || ||||| || || ||||| Sbjct 20127 ATTAATAAAATCTGCTTCACGCTTTCCATTTTGGTCTTTAAAGTTACGGTTGACCGCTAG 20068 Query 28365 TGTGAAAGTTGC-AACATCAATTCCACTTTGAGTTGTTCTAAATTCAGGATCTTTAGTTA 28423 ||| ||| | || | | || |||| |||||| |||| | || || || ||||||| Sbjct 20067 TGTAAAACTAGCGATCGTC-GTTCCTTGTTGAGTATTTCTTATGTCTGGGTCCTTAGTTA 20009 Query 28424 AACGACCTACTAATACGACTCTGTTAATCAT 28454 | || || |||||||| || | |||||||| Sbjct 20008 ACCGTCCCACTAATACAACGTTATTAATCAT 19978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129775227742656