Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_028826.1
Length=42265
Score E
Sequences producing significant alignments: (Bits) Value
seq640 275 2e-69
seq7607 118 3e-22
>seq640
Length=68089
Score = 275 bits (304), Expect = 2e-69
Identities = 404/569 (71%), Gaps = 2/569 (0%)
Strand=Plus/Minus
Query 13386 ACATTAGCAGGAGTAATTGGGGTAGGTAAATCCTCAATGACAAAATTATTAAGCGAATTA 13445
|| || ||||| || || || || || || || ||||||||| | ||| || |
Sbjct 11902 ACGTTGGCAGGTGTTATCGGTGTGGGCAAGTCTTCAATGACAGCCCTTTTAGCAGAGGCA 11843
Query 13446 TTAGAAACCAAAGCAGTTTATGAACCAGTGGAGGAAAACCCTCTACTGGAAAAGTTCTAC 13505
||||| || || || || ||||| || | || | ||| | | || |||||
Sbjct 11842 TTAGACACAAAGGCGGTGTATGAGCCTATTGAAAACAACGAGTTGTTAGAGCTTTTCTAT 11783
Query 13506 ACAGACAAGAAAAAGTATGGCTTTCTATTTCAGATTGATATGTTATCCAAGCGTTTTGAA 13565
|||||| |||||||||| || | ||||| || || ||| | ||||| |||
Sbjct 11782 CAGGACAAGGAAAAGTATGGATTCGTCTTTCAAATAGACATGCTGAGTCGCCGTTTCGAA 11723
Query 13566 CTTATTCAGGAGGCTATGAGTGTTAAAAATGGAATCCTTGATCGTTCAATTTATGAAGAT 13625
|||||||| ||||||||||||||||| | || ||| | || || || |||||||| |||
Sbjct 11722 CTTATTCAAGAGGCTATGAGTGTTAAGCACGGCATCTTAGACCGCTCCATTTATGAGGAT 11663
Query 13626 TCAATCTTTTTAAAGCAGTTATATGATGAAGGTGCTGTAGATAAATTAGAGTTAGATGTG 13685
| ||||| | | || | ||||||||||||||||| ||| | ||| ||| | |
Sbjct 11662 GCTATCTTCCTTGACCAACTCTATGATGAAGGTGCTGTCACTAAGGTGGAGAAAGAGGCG 11603
Query 13686 TAT-ACAAAGTTATTAAATCGCATGTTAAAAGAATTAGAACCTTTACCTAAGAAATCACC 13744
|| || || | | |||||| | ||||| ||||| || | |||||||| || ||
Sbjct 11602 TACCACCGCCTTGCTTCA-CGCATGCTTAAAGAGTTAGAGCCCCTTCCTAAGAAGTCTCC 11544
Query 13745 AGATTTGATGATTGTTTTAAATTGTAGTTTTGAAGAAGAAATCAAGCGTATTAATAAACG 13804
||| ||||||| |||||||| ||| |||||| ||||| || |||||||||||| |||
Sbjct 11543 AGACATGATGATAGTTTTAAACTGTTCTTTTGAGGAAGAGATTAAGCGTATTAATGCACG 11484
Query 13805 AGCAAGAGAATTTGAGAAGGTTGAAGAAGGCACTGAACTATATAAATACTTCAGAGACCA 13864
|| ||||||||||| ||||| ||||||||||| || || ||| ||||||| ||| ||||
Sbjct 11483 TGCCAGAGAATTTGAAAAGGTGGAAGAAGGCACAGAGCTTTATGAATACTTTAGAAACCA 11424
Query 13865 TCACGCTAATTATCAAGACTGGATGGCTAAAGATTTAGGCTTCCCTAAATTAATTATAGA 13924
|| | || ||||| | ||||| ||||||||||| |||||||| || | | ||
Sbjct 11423 CCATGAAAACTATCAGAAATGGATTCAGAAAGATTTAGGATTCCCTAAGTTGGTGTTGGA 11364
Query 13925 TGTAACAGAACTTGACTATGTTAATAACC 13953
||| || | | |||| ||||| ||||
Sbjct 11363 TGTTACTCACATGGACTTTGTTAGCAACC 11335
Score = 197 bits (218), Expect = 4e-46
Identities = 381/548 (70%), Gaps = 18/548 (3%)
Strand=Plus/Plus
Query 15188 CTTTCTTATTTCTTTGGTTCTGTATAGTTCAATGCTTTTTCACTATCTGTAATGCCTTTA 15247
|||||| |||| || |||||||| | ||||| |||||||| || | |||||
Sbjct 36207 CTTTCT-ATTTACGAGGCTCTGTATAAGAAAGAGCTTTGTCACTATCAGTTAGTCCTTTG 36265
Query 15248 GTTGTTGGGTCTGGAATCATGTTCAACGCATTAATCACAGTTAAGCCCAATACGTATGGA 15307
|| |||||||| |||| |||||| | ||||| || || || || || |||||||| |||
Sbjct 36266 GTAGTTGGGTCAGGAACCATGTTAAGGGCATTGATTACCGTCAAACCTAATACGTAAGGA 36325
Query 15308 TTACTTACTGCTCTGACTAAC-ACATCCAATAATGTATCAAAAGATGTAATATCTTCAAA 15366
|| || || || || || || |||||||| || |||||||| || || || || || ||
Sbjct 36326 TTGCTGACAGC-CTTACCAAGTACATCCAACAACGTATCAAACGAGGTGATGTCCTCGAA 36384
Query 15367 CTTCAAACCAAAGTATGCTAAAATTGGAATGGCTAATGCGCCTACGAAACGTAAAATAAA 15426
|||||| |||||||| |||| ||| |||| ||| || ||||||||||| || || ||
Sbjct 36385 CTTCAAGCCAAAGTACGCTAGAATAGGAACTAATAAAGCCCCTACGAAACGCAAGATGAA 36444
Query 15427 TGTTAGGTTGTCTTTGCTAAAACGAACTTTCCAGTTTAtttttttC-ATTCTACATCA-- 15483
|| | ||| | ||||||||||| ||| ||||||| || || ||| | ||| ||||
Sbjct 36445 GGTGATGTTCTGCTTGCTAAAACGCACTCTCCAGTTAATATTATTCAAATCT--ATCAAT 36502
Query 15484 CTCCTATTTCATAAATAAGGATAAACCAATACT-AACTAATG---CTCCAATAACTGCGC 15539
||||||| | ||||| | | ||||||| |||| || | ||| || |
Sbjct 36503 CTCCTATCCTACAAATA--CTTTTATCAATACTGTTGCAATGGAAGTC--AGAACCGCCC 36558
Query 15540 CAACAGTTGTACGTGTTAGCCATGTATAGCTGTTTTTGAGGTCAGCTAAT-GCCTCTCTA 15598
| || || | ||||||| ||| | |||||| || | | || ||||||||
Sbjct 36559 CTACCACTGCTCTACTTAGCCAATCATACTTAGATTTGAGTTC-GTTGATCGCCTCTCTG 36617
Query 15599 TTCTGCATGGACATGCTGTAAGCCTTATCTGCTTTCTCAGATTGGCGTTCTAAGCGACTA 15658
|| || ||| | ||||| || || || |||||||| || ||||| || | | |
Sbjct 36618 TTACTCAAACCCATCGTATAAGCTTTGTCAGCCTTCTCAGACTGCCGTTCCAACCTAATG 36677
Query 15659 CCATACTCTTTCAAGTCAGCTTTAATCTCAGGTATATCATCCAACTTTACCTCAATTCTT 15718
| |||||||| ||||||||||||| || || || | ||| | ||||| |
Sbjct 36678 GAAGTGTCTTTCAAAGACTCTTTAATCTCAGGAATGTCGTCAAGCTTAGCTTCAATACGG 36737
Query 15719 GCTAACTG 15726
||||||||
Sbjct 36738 GCTAACTG 36745
Score = 161 bits (178), Expect = 3e-35
Identities = 269/384 (70%), Gaps = 15/384 (4%)
Strand=Plus/Plus
Query 14151 TTATAGACTCAAATAGATACTATCAATTCTCACATCGTTTACAGCGCCTTCGCCGTT--- 14207
|||||| || ||||| || | || | |||||||| |||| || |||||
Sbjct 35222 TTATAGGCTTAAATAAATGTCGTTGATACGGACATCGTTAACAGGTGACTCACCGTTCTT 35281
Query 14208 AGCTTTATTCGCTCTACGCAAGATAACATCTACTTTTTTACCTTTGAACTGAGCTTTCTT 14267
| | || || || | || ||||| |||||||| || ||||||||||| || |||||
Sbjct 35282 ACCGTTGTTTGCACGGCGTAAGATGACATCTACCTTCTTACCTTTGAATTG---GTTCTT 35338
Query 14268 ---AACAGTTACGTCAAAACCAAGCTCTTGTCCACCTTGATAGCCGTATGCTTTCTTAAC 14324
||||||||||||||| || | | | | ||| ||||| || || || || ||||||||
Sbjct 35339 GCCAACAGTTACGTCAAAGCCTAACGCATCTCCGCCTTGGTAACCATAAGCCTTCTTAAC 35398
Query 14325 GTCTGGTCGTTTAATACCAGCGGATTGAACACGTGTCAACTCTTTACCAGTGCCATGTTG 14384
|||||| || |||||| ||| || || ||||| | |||||| | ||| |||||||
Sbjct 35399 GTCTGGGCGAGCAATACCTCGGGACTGCACTCGTGTAAGCTCTTTGCTAGTTCCATGTTC 35458
Query 14385 CATAAAGATGACATATGCATATTTTCCAATTGAACCTTGTGGTTTGTCTGGAACTAGCCA 14444
||| || | || | || | ||||||| || | ||||| || || |||| |||
Sbjct 35459 CATGAACAATACCCAAGCCGTTGAACCAATTGCTCCATTAGGTTTATCGGGGACTAACCA 35518
Query 14445 ACCAGCCACACGAATTTGGTCTTT--GC-CATGACCATTAAAGTAATCAAGTTTACCCCA 14501
||||| || | ||| || | || || | | || | | | ||||| ||||||||
Sbjct 35519 TCCAGCTACTCTAATCTGCCCCTTAGGCTCTTCACGGT---ACTTGTCAAGCTTACCCCA 35575
Query 14502 CGCATTACCTTGGTGTTTAGGTTT 14525
||||| |||||||||||||||||
Sbjct 35576 AGCATTTCCTTGGTGTTTAGGTTT 35599
Score = 140 bits (154), Expect = 9e-29
Identities = 244/352 (69%), Gaps = 6/352 (2%)
Strand=Plus/Plus
Query 17104 CCTTGTCTAGCTACTGAGTAACCTTGTTCAGTTGTATTATCAGTGTACGTCCACGTGGTA 17163
||||| | ||| |||| | | ||||| || || || || || || || |||||||| |||
Sbjct 38604 CCTTGACGAGCCACTGTGAAGCCTTGCTCCGTGGTGTTGTCCGTATAAGTCCACGTAGTA 38663
Query 17164 CGTGTCCATAGGTATTGACCTTGTGGGGTGGTAGGTATGGTTGTAGACCAACCGCTTGTA 17223
|||||||||||| | ||||| ||| || || | |||||||||||| ||
Sbjct 38664 CGTGTCCATAGGAACTGACCAGCTGGTACAACCGGAATTGAAGTAGACCAACCGGAGGTG 38723
Query 17224 GGTCTAACTGTGCCACTAGTATTCACAGCATATTCAATCACTGTGGTTTTAATGCCTACT 17283
|| |||| || ||||| | || |||||| ||||||| || | || ||||||
Sbjct 38724 GGCTTAACCGTCCCACTGGCGTTTGTAGCATACTCAATCAAAGTATCCTCGATTCCTACT 38783
Query 17284 CCATCTTTCCCAGCTATACCGTCTTGTCCACGATCGCCATCCGCTCCCATTCTAGCTACT 17343
||||| || ||||| ||||| || | || | || || || ||||| |||| ||
Sbjct 38784 CCATCCTTACCAGCAATACCATCATCACCTTTGGCACCGTCTGCCCCCATCTTAGCAACG 38843
Query 17344 GAGTAACCTGTTTCGCTTGAATTGTCTGTATAAGTCCATACTGTTTTAGTCCATAGGTA- 17402
|||||||| || ||||| ||| || |||||||| |||| |||||||| ||| |
Sbjct 38844 GAGTAACCAACCTCTGTTGAAAGGTCAGTGTAAGTCCACTCTGTCTTAGTCCAGAGGAAG 38903
Query 17403 TTG--ACCAGCTGGAACAGTTGGTACTTGAGATTGCCACCCTGTAGCTGGTG 17452
||| | |||| || || || ||||| | |||||| || | || ||||
Sbjct 38904 TTGTTAGGAGCT---ACTGTAGGGACTTGTGTTTGCCAGCCAGATGCAGGTG 38952
>seq7607
Length=81728
Score = 118 bits (130), Expect = 3e-22
Identities = 191/275 (69%), Gaps = 0/275 (0%)
Strand=Plus/Plus
Query 14182 ACATCGTTTACAGCGCCTTCGCCGTTAGCTTTATTCGCTCTACGCAAGATAACATCTACT 14241
|||||||| || | ||||| || || ||| ||| ||||| || ||||||| ||| |
Sbjct 45204 ACATCGTTGACTACACCTTCACCTTTCGCTCGATTTGCTCTTCGTAAGATAATATCGATC 45263
Query 14242 TTTTTACCTTTGAACTGAGCTTTCTTAACAGTTACGTCAAAACCAAGCTCTTGTCCACCT 14301
|| |||||||| ||| | | || | |||||| ||||| || ||| | | |||||||
Sbjct 45264 TTCTTACCTTTTAACCAGTCAGTATTGAAAGTTACATCAAACCCTAGCGCATCTCCACCT 45323
Query 14302 TGATAGCCGTATGCTTTCTTAACGTCTGGTCGTTTAATACCAGCGGATTGAACACGTGTC 14361
||||| ||||| || ||||| || || || ||| |||||| || | | |||
Sbjct 45324 TGATAACCGTAAGCCTTCTTGACATCAGGCCGTGAAATACCCTTAGACTCGTATCTAGTC 45383
Query 14362 AACTCTTTACCAGTGCCATGTTGCATAAAGATGACATATGCATATTTTCCAATTGAACCT 14421
|| || ||| |||||||| | ||| | | || |||| | ||| |||| |||
Sbjct 45384 AATTCATTAGTCGTGCCATGCTCCATGATCAAAACCCATGCTCTTGCTCCGATTGGTCCT 45443
Query 14422 TGTGGTTTGTCTGGAACTAGCCAACCAGCCACACG 14456
||||| || || |||| ||||||||| |||||
Sbjct 45444 CGTGGTGCGTTAGGTACTAACCAACCAGCGACACG 45478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 134869525051416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |