Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_028840.1 Length=111751 Score E Sequences producing significant alignments: (Bits) Value seq1361 116 3e-21 >seq1361 Length=62553 Score = 116 bits (128), Expect = 3e-21 Identities = 234/347 (67%), Gaps = 0/347 (0%) Strand=Plus/Minus Query 78593 TAGGAATGAACGGCAGCCCATAGAAACTTTGTAGTCTCCAGTAACTTCTACAACCTTGTC 78652 || ||| || || |||||||| | |||||| || ||| || | ||| || | |||||| Sbjct 32878 TAAGAAGGAGCGACAGCCCATTGGTACTTTGAAGCTTCCTGTCAATTCAACGATCTTGTC 32819 Query 78653 ATAGCTGATATAATCTGGATACATACGTTCAGCAGTACATTTCATAGCTAACTTCTTGAT 78712 ||| | | | |||||| ||||| | || | | ||||| | ||||| | ||||| Sbjct 32818 ATAATTTAGAATATCTGGGTACATTCTTTTTGTGGCACATTCTAAGGCTAATTGTTTGAT 32759 Query 78713 GTCATAATTAACATCTCCTGGTTTCATATTTACACCATCACGAAGTACAAATACCAGTTT 78772 |||||| || ||| |||||| | ||| | || || ||| ||||| || ||| Sbjct 32758 GTCATAGTTTGGATCAGTTGGTTTAAGATTGATTCCGTCTTTTAGTGTAAATATCAATTT 32699 Query 78773 CGGGAAGATAGCTGTACGTTTATTGATACCTAAGCCATCCATGCGTACTTTCAGTATTGC 78832 |||||||| ||||| ||||| | | ||||| |||| || || | || | || || Sbjct 32698 TGGGAAGATCGCTGTCCGTTTCTCACTGCCTAATCCATTGATTCGGATTTGTAAAATCGC 32639 Query 78833 TTTCTGTACTAGACGTGCTTCCCAAGAAGTTCCTAGACCAAAACCAAAGGTAATAAATGG 78892 ||| || | | ||| | |||| | |||||||| || || | | | |||| || Sbjct 32638 TTTTTGGATTTCTCGTTCAAACCAATTTTTACCTAGACCGAAGCCGAGTGAAGTAAAAGG 32579 Query 78893 ACTCTGACCATTAGAGTTGAACATGGTATTGATTTCATATTCTAAAC 78939 | || || || || |||| | |||||||| |||||||| |||| Sbjct 32578 CGTTTGTCCGTTGGAAGTGAAAAGTGTATTGATCTCATATTCCAAAC 32532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356780951151488