Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_028983.1 Length=138877 Score E Sequences producing significant alignments: (Bits) Value seq64495 87.8 2e-12 seq82932 86.0 6e-12 seq2203 86.0 6e-12 >seq64495 Length=424 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 33572 TTAGCTCAATTGGTTAGAGCACACGGCTCATAACCGTGCGGTTGTAGGTTCGATTCCTAC 33631 |||||||| |||||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 317 TTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGAGTCCTAC 376 Query 33632 A 33632 | Sbjct 377 A 377 >seq82932 Length=3722 Score = 86.0 bits (94), Expect = 6e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 33570 CCTTAGCTCAATTGGTTAGAGCACACGGCTCATAACCGTGCGGTTGTAGGTTCGATTCCT 33629 |||||||||| |||||||||||| ||||||||||||||| ||| |||||||||| ||| Sbjct 319 CCTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCTGGTCGTAGGTTCGAGACCT 260 Query 33630 ACAGG 33634 ||||| Sbjct 259 ACAGG 255 >seq2203 Length=131112 Score = 86.0 bits (94), Expect = 6e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 33570 CCTTAGCTCAATTGGTTAGAGCACACGGCTCATAACCGTGCGGTTGTAGGTTCGATTCCT 33629 |||||||||| ||||| |||||| || |||||||||||| |||| |||||||||| |||| Sbjct 24692 CCTTAGCTCAGTTGGTCAGAGCAGACAGCTCATAACCGTCCGGTCGTAGGTTCGAATCCT 24751 Query 33630 ACAGG 33634 ||||| Sbjct 24752 ACAGG 24756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443389376707680