Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_028984.1 Length=30664 Score E Sequences producing significant alignments: (Bits) Value seq1464 158 2e-34 seq1539 150 4e-32 >seq1464 Length=66918 Score = 158 bits (174), Expect = 2e-34 Identities = 238/334 (71%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 27778 AGAGGAGTTGAAATTTTATGATAAATAACGTAGTACTCGTTGGTCGCACAACTAAAGAAA 27837 ||||||| ||| ||| |||| |||||||| ||||| ||||| || || ||||| Sbjct 17838 AGAGGAGATGACCATTT-TGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATC 17896 Query 27838 TTGAATTAAAGTATACA---AGTAACAACTTAGCATATGCAAACTTTACGCTTGCGGTTA 27894 || ||| |||||| ||| || || || |||| || || | || || | Sbjct 17897 CAGATTTACGATATACATCAAGTGGCA-CT--GCTGTAGCAACGTTCACTTTAGCTGTCA 17953 Query 27895 ACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTCATTAATATCGTGATTT 27954 | ||||| || | | ||||| || | ||||| || ||||| |||||| ||||||| Sbjct 17954 ATCGTAACTTCACGAGCCAAAACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTT 18013 Query 27955 GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGGACTCTTTTAGGCATTA 28014 |||| | ||| |||| |||| |||| || | ||||| ||||||||||| | | Sbjct 18014 GGCGAAAATCAGCAGAAACACTAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAA 18073 Query 28015 CTGGTCGAATTCAGACCCGCAATTATGAAAACCAACAAGGTCAGCGTGTTTACGTCACAG 28074 ||||||| ||||| || || |||||| || |||||||| || ||||| ||||| |||| Sbjct 18074 CTGGTCGTATTCAAACGCGTTCTTATGATAATCAACAAGGACAACGTGTGTACGTAACAG 18133 Query 28075 AAGTTGTTGCGGATAATTTCCAAATTTTGGAAAG 28108 |||| ||||| || || |||||| | |||||||| Sbjct 18134 AAGTAGTTGCTGAAAACTTCCAATTATTGGAAAG 18167 >seq1539 Length=57711 Score = 150 bits (166), Expect = 4e-32 Identities = 176/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 27879 TTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTC 27938 ||||| | || ||||| || ||||||| |||||||| || | || ||||||||||| Sbjct 16089 TTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGAGAAGCTGATTTT 16030 Query 27939 ATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGG 27998 || ||| |||||||||||| | | ||| |||| | |||| | |||||||| || Sbjct 16029 ATCAATTGTGTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTAGCTAAAAAGGGT 15970 Query 27999 ACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAACAAGGTCAG 28058 | | | | ||| | || || ||||| || || | |||||| ||||| ||||| ||| Sbjct 15969 AGTTTAATCGGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAACCAGCAAGGACAG 15910 Query 28059 CGTGTTTACGTCACAGAAGTTGTTGCGGATAATTTCCAAATTTTGGAAAGAAGAGAAG 28116 ||||| ||||| || |||||||| || |||||||||||| | || ||||| | || || Sbjct 15909 CGTGTCTACGTGACTGAAGTTGTGGCCGATAATTTCCAACTATTAGAAAGTAAAGCAG 15852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97816896161808