Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_028996.1 Length=54295 Score E Sequences producing significant alignments: (Bits) Value seq7607 242 1e-59 >seq7607 Length=81728 Score = 242 bits (268), Expect = 1e-59 Identities = 481/701 (69%), Gaps = 16/701 (2%) Strand=Plus/Minus Query 623 AATATGCCGCCTAGACATGGAAAAAGTAGAAGTGCAGGTTTATTTGTAGAATGGATTTTA 682 |||||||||||||||||||| || || || ||||| |||||||| ||| Sbjct 69522 AATATGCCGCCTAGACATGGTAAGTCCTTAACACTTGGACGGTTTGTCGAATGGATATTA 69463 Query 683 GGTaaaaataaaaatgaaaaaaTAATGACTGGTAGTTATAATGAGACTCTTTCAACTATG 742 || || || | | | ||||| |||||||| ||||| ||||| || || || | Sbjct 69462 GGGAATGATCATAGCAAGAAAATTATGACTGGATCATATAACGAGACACTATCGACCGTA 69403 Query 743 TTTTCAAAGAATGTTAGAAATGCTATTCAAGAGGAAAAAGCTGATATAGACACTATTATT 802 ||||| |||||||| ||||| | || ||||| | |||||| |||| ||| | || | Sbjct 69402 TTTTCCAAGAATGTGAGAAACACAATCCAAGAAGTAAAAGCCGATAAAGATATGATAGTC 69343 Query 803 TATAGCGATATATTTCCTAACACAAAAATCAAACACGGTGATGGAGCTATGAATTTATGG 862 || |||||| || | | | || || ||| | |||||||||||||||||| | ||| Sbjct 69342 TACTCCGATATTTT---TGATGCGAAGATAAAATATGGTGATGGAGCTATGAATCTTTGG 69286 Query 863 TCATTGGAAGGTGGTTATAATAATTATTTGGCGACCTCTCCGAGTGGTACAGCAACAGGC 922 ||||||| ||| |||||||| || |||| || || || | ||||||||| || || Sbjct 69285 AGTTTGGAAGATGGCTATAATAACTACCTGGCCACATCGCCAACTGGTACAGCTACTGG- 69227 Query 923 TTTGGGTGTTCTC-TGATGATTGTAGATGACTTAATTAAAAATGCAGAAGAAGCTTACAA 981 ||| |||| | | || || | |||||| |||| || || ||||| ||||| |||| Sbjct 69226 TTTTGGTGCAGACATAATTATCATTGATGACGTAATCAAGAACGCAGATGAAGCAAACAA 69167 Query 982 CGAGAATGTTCTTGAAAAACATTGGGATTGGTTTACTAATACTATGTTATCAAGGCTTGA 1041 || ||| | || ||||||||||| |||||| ||||||||| |||| | ||||| Sbjct 69166 CGCTGCAGTTTTGGATAAACATTGGGAATGGTTTGTAAATACTATGCTATCCCGTCTTGA 69107 Query 1042 -AGAAGGTGGAAAAATAATAATTATAATGACTAGATGGTCTAGCAAGGATTTAGCAGGTA 1100 || | || || || || || | |||||||||||| |||||| ||||| ||||||| Sbjct 69106 GAGCA-ACGGTAAGATCATTATCAACATGACTAGATGGCATAGCAATGATTTGGCAGGTA 69048 Query 1101 GGGCATTAGA-ACATTACAAAGAAGAAGGCAAGAAGGTAAGACATATTAATATGAAAGCA 1159 | || ||| | ||| | | || || | ||||| | |||||||| | |||| Sbjct 69047 GAGCGTTAAAGGAATTGCCACTTAG-CGGGTATAAGGTTAAGCATATTAACTTTCAAGCG 68989 Query 1160 TTACAGGAAGATGGCAA---CATGCTTTGTGAAGAAGTATTATCTCTAAATAG--TTATA 1214 | | ||| | | | |||||||| ||||| | || | ||| | || ||| Sbjct 68988 TATGATGAAAAAAACGATCGGATGCTTTGCGAAGA--TGTTCTTTCTTATGAGGATTACC 68931 Query 1215 AATCAAAAGTAAGAGCCATGGGTGAAGATATTGCAAGTGCTAACTATCAGCAAGAACCTA 1274 |||| | | | ||||||| || || || || || ||||| || ||||| |||| Sbjct 68930 TGCGTAAAGCTAAAACGATGGGTGCGGACATCGCTAGCGCCAACTACCAACAAGAGCCTA 68871 Query 1275 TCGACCTTAAAGGATGTTTATACACTAGATTTAAGACATAT 1315 ||||| ||||||| | || ||| | || ||||| ||| Sbjct 68870 TCGACATTAAAGGGAGATTGTACGGTGAGTTCAAGACTTAT 68830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 173292344251656