Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_029009.1 Length=147589 Score E Sequences producing significant alignments: (Bits) Value seq1361 682 0.0 seq640 275 6e-69 seq7224 250 2e-61 seq10807 215 5e-51 seq7607 98.7 9e-16 >seq1361 Length=62553 Score = 682 bits (756), Expect = 0.0 Identities = 1199/1733 (69%), Gaps = 56/1733 (3%) Strand=Plus/Minus Query 37488 AACCTTAC---ATATGTTTTACACGTGCATCTATTTCTTTCTTACGTCCATGTGCATTAG 37544 |||||||| |||||||| || |||| |||||||| | | || || | | | Sbjct 33839 AACCTTACTTCATATGTTTCACGCGTGATGAGATTTCTTTGTGTCTGCCGTGGACCATTG 33780 Query 37545 GACGAGCTTGTGGTTGACCTAAATAACCACATTGTCTTTTAACAACATCACATGTTGCAG 37604 | || |||||||| | |||| ||| || ||| || ||| || || ||||||| | | Sbjct 33779 GGCGGGCTTGTGGGTTTCCTAGATAGCCGCATGTTCGTTTGACTACGTCACATGATTTTG 33720 Query 37605 GGTCATTATTACCACATTGCGGGCATTCATAACCATCTGATGTAGGGTTAAACTCTCCAT 37664 | || | ||| || |||| ||||||||| | ||| | || || | || ||||| | Sbjct 33719 GATCGTGATTGCCGCATTCTGGGCATTCAAAGCCACGTTCAGTTGGTTGGAAATCTCCTT 33660 Query 37665 CAAAACCGCATTCATGACATTTATCAATTGGGGTGTTTGTTCCAAGATAACCAACTTTAT 37724 ||||||| |||| | || | ||| || || || || ||||| | ||| || ||||| | Sbjct 33659 CAAAACCACATTGGTAGCAATGATCGATCGGTGTATTGGTTCCTAAATAGCCTACTTTGT 33600 Query 37725 CGTAGCTGTAGTCCCAAACAGCTTCTAACGCCTTAAGGTTGTG----AACTAGTTTAGGG 37780 | ||| ||||||||||||||||||| || ||| |||| || ||| | | ||| Sbjct 33599 CATAGGCAAAGTCCCAAACAGCTTCTAATGCTTTAGGGTTTTGTTGCAAC-ACT---GGG 33544 Query 37781 TATTCTACA-TAATGGATAAAACCACCGGAAGCATATTTTGGAAACTCTTTTTCAAAATC 37839 ||||| ||| ||||||||||| ||||| ||| ||||||||| | ||||||||||| || Sbjct 33543 TATTC-ACAGTAATGGATAAAGCCACCAGAACAGTATTTTGGATAGTCTTTTTCAAATTC 33485 Query 37840 AATCTTTTCAAAAGGTGTTGGAGCTTTGCGAACATCATAGTGGAAGCTATTTGTATAATA 37899 || ||||||||| || |||||| ||| || |||||||||||||| || || || ||||| Sbjct 33484 AAGCTTTTCAAATGGCGTTGGATTTTTACGCACATCATAGTGGAAACTGTTAGTGTAATA 33425 Query 37900 TTCTTTATCTGTGATATTCTCAATAACTCCGTATTTTTCTGTATCCATGCGACAGAATCT 37959 ||| |||||||||||||| |||| | ||| |||| |||||||| | || || || | Sbjct 33424 TTCCTTATCTGTGATATTTTCAACGATACCGAATTTCTCTGTATCTAAACGGCAAAAACG 33365 Query 37960 ATCAGTTAAACTTTCACTTGGTGTTGAGTAGATAGAGAACCAGATTCCTGT-TTCTTTTG 38018 ||| || || |||||||||||||| || || | ||| ||| | | ||| ||| Sbjct 33364 ATCCGTCAAGCTTTCACTTGGTGTGGAATATACGCTGAAGT-GATAGCCATATTCATTTC 33306 Query 38019 TCCATTCATCCTTTTTATCATAAAGCTTACGTAGAACGTCTAAAGCAAACTCTTTTGCCT 38078 ||| | || || | | || || | | |||| || || ||||| || | Sbjct 33305 CCCAAGCGTCTGCATTGGCTTTTAGTTTTTTCACGATATCTAGAGTGAAGTCTTTGGCTT 33246 Query 38079 CTTCATGATGTGGGTCTGTTTTATCTTGCCAGTCACCACCATAGAAC-ATGCTAGCAACC 38137 | ||| ||| || ||| ||||| ||| |||| | || ||| || Sbjct 33245 CAGCAT---------------TATTTTCCCATTCACCGCCAAAGAAAGAAGC-AGCGACT 33202 Query 38138 TCGTACAGCCCAATATAGCCCATAGAAACCGTTGCACGGTTATTTATGAACAATTGTTTT 38197 || || || || || ||||| | ||||| ||||| || |||| | || |||| Sbjct 33201 TCATAAAGTCCGATGTAGCCTAATGAAACAGTTGCTCGACGATTTTTAAATAATT----- 33147 Query 38198 ACATCGTCATCATCGGTTAAAT-TAGCC-----CCAAAAGCACCATGTTTGTACAAGATA 38251 |||| | |||| || | ||| | || || ||||||| |||| | ||| Sbjct 33146 -CATCTACGGCATCTGTACGAGATAGTCGTTTACCGAATGCACCATACATGTAAAGGATC 33088 Query 38252 GGAGCATTCTTTGGTTGAGCTTCGTAAGTACGTTCAATTCGATAAACCAAAGCATCATGT 38311 || ||||| ||| ||||| | | |||||| | |||||||| || ||||| | Sbjct 33087 GGTGCATTTGCTGGAATCGCTTCTTTACAACGTTCGACACGATAAACTAAGGCATCTTTC 33028 Query 38312 AATACCTTAGCTCGTTCTTCAAAAATTTCCCAGAAGACTTCTTTATCCCCTTCTGATTCA 38371 | | | || ||| || | || |||||| ||||| || || |||| ||| Sbjct 33027 ATGATCGACAAGCGATCTGAAAGTAATTGCCAGAATTTTTCTTGGTCACCGTCTGCTTCT 32968 Query 38372 ATAGCAATACGTGGTAAGTTAAGGGTTACTACTCCTAAATTCATACGACCAGAGTTTACT 38431 | || || || || ||||| | || || || |||| |||||| | || || ||| Sbjct 32967 AAGGCGATCCGCGGCAAGTTCAACGTAACCACACCTAGATTCATTCTTCCGACATTCACT 32908 Query 38432 TCGTTTCCATGTTCATCTTTCCATCCTTGTAAGAATGAACGACAACCCATAGGACATTTA 38491 || | || | || |||||||| ||||||||||| || ||||| ||||| || ||| Sbjct 32907 TCTTCACCGTTCTCGTCTTTCCAACCTTGTAAGAAGGAGCGACAGCCCATTGGTACTTTG 32848 Query 38492 AATGAACCTGTTAGCTCAACAATTTTGTCATAGTTCAAAATATCAGGGTACATACGTTTA 38551 || ||||| | ||||| || |||||||| || | |||||| |||||||| | ||| Sbjct 32847 AAGCTTCCTGTCAATTCAACGATCTTGTCATAATTTAGAATATCTGGGTACATTCTTTTT 32788 Query 38552 GCTGAACATTCTAATGCTAACTGTTTTACTTCATAGTTAGGGTCTTCTGGTTTACGGTTA 38611 | | ||||||||| ||||| ||||| | |||||||| || || ||||||| | || Sbjct 32787 GTGGCACATTCTAAGGCTAATTGTTTGATGTCATAGTTTGGATCAGTTGGTTTAAGATTG 32728 Query 38612 ACTCCGTCTTTAATAGTGAACAATAATTTAGGGAAGATTGCTGTACGTCCTTCTGTTCCT 38671 | ||||||||| | || || | ||||| |||||||| ||||| ||| || | ||| Sbjct 32727 ATTCCGTCTTTTAGTGTAAATATCAATTTTGGGAAGATCGCTGTCCGTTTCTCACTGCCT 32668 Query 38672 AGACCTTGGATACGTACTTTAAAAATAGCTTTTTGGATTTCTCTTTC---CCAACGTCCA 38728 | || | ||| || | || ||||| |||||||||||||||| ||| |||| | Sbjct 32667 AATCCATTGATTCGGATTTGTAAAATCGCTTTTTGGATTTCTCGTTCAAACCAATTT--- 32611 Query 38729 GTACCTAAACCAAAACCAATAGACGTGAAAGGGGTCTGACCATTCGATGTAAATAACGTA 38788 |||||| ||| || || | || || ||||| || || || || || || || | ||| Sbjct 32610 TTACCTAGACCGAAGCCGAGTGAAGTAAAAGGCGTTTGTCCGTTGGAAGTGAAAAGTGTA 32551 Query 38789 TTGATTTCATACTCTAGGCTTTGCATTGCATCGTAAATATCTTTGTTTGTTTTCTCGATT 38848 ||||| ||||| || | |||||||| ||||| |||||||||| || ||||| | || Sbjct 32550 TTGATCTCATATTCCAAACTTTGCATGGCATCAAAAATATCTTTTTTGGTTTTTGCTTTT 32491 Query 38849 GCATATGTTTCT---GGTTCGGGAAT-ACGGT--AACGTTTAGCATCCGCCATATGTTTT 38902 ||||| | |||| ||||||| | || | | ||| ||||| | ||||||| Sbjct 32490 GCATAGGCTTCTTGCCGTTCGGGTGTGTCGATCCATTCTTTGGCATCAATTAAATGTTTT 32431 Query 38903 TGATAATTCATTTCGGCATAAGGTGCTAATACTTCATCAATGCGGTCAAATGAACAACCC 38962 | ||||| | || ||| |||| || | | |||||| |||| || ||||| || Sbjct 32430 TTGTAATTTAATTGTGCAAAAGGAGCAAGCAATTCATCTGTGCGATCGGCAGAACATCCG 32371 Query 38963 CCATACTGACTGGAAGCCACATTCGCAATAATTTGTGCTGTTTGTGCTGTAGCTGTTTGA 39022 ||||| || || || || ||||| ||||| || |||| | ||||| || |||||||| Sbjct 32370 CCATATTGGCTAGATGCAACATTGGCAATGATCTGTGAAATCTGTGCCGTTGCTGTTTGG 32311 Query 39023 ATGGAATGAGGTGAACCGATTTCTGCATTACCCATTTTAAACCCGTTCTTCAACATATAT 39082 || || | ||||| ||| ||||||||| || |||||||||||||| ||||||||| | Sbjct 32310 ATCGATTTTGGTGATTCGACTTCTGCATTTCCAATTTTAAACCCGTTGTTCAACATACCT 32251 Query 39083 TCAAAGTCAATCAAACAACAATTTGTCATTGGACGATAAGGTTGGTAGTCTAAATCGTGA 39142 | ||||| |||||||| |||||||||||||| ||| || ||||| || | ||| ||| Sbjct 32250 TTGAAGTCGATCAAACAGCAATTTGTCATTGGTGTATACGGATGGTAATCGAGATCATGA 32191 Query 39143 TAATGAATATCTCCACGTAAATGTGCGTTAGCTACATGAGGAGGGAGCATTTT 39195 ||||| ||||| || | ||| ||||| || | ||| || || || | ||| Sbjct 32190 TAATGGATATCGCCTTTTTGATGGGCGTTGGCAATATGCGGTGGAAGTAATTT 32138 >seq640 Length=68089 Score = 275 bits (304), Expect = 6e-69 Identities = 416/589 (71%), Gaps = 2/589 (0%) Strand=Plus/Plus Query 36848 GGTTGTTAACAAAATCAATCTCTGTAACATCGAGAATAATTTTTGGAAAACCTAAATCTC 36907 ||||| ||||||| || || | |||||||| | | | || || || ||||||||| Sbjct 11335 GGTTGCTAACAAAGTCCATGTGAGTAACATCCAACACCAACTTAGGGAATCCTAAATCTT 11394 Query 36908 TTTCCATCCAATTTTGATAGTTCTCATGATGACGTTTGAAGTACTCGTATAATTCGGTAC 36967 | | ||||| || |||||||| ||||| || | | ||||| || || | || || | Sbjct 11395 TCTGAATCCATTTCTGATAGTTTTCATGGTGGTTTCTAAAGTATTCATAAAGCTCTGTGC 11454 Query 36968 CTTCTTCTACTTTTTCAAATTCACGAGCACGAGCATTGATTCGTCTGATTTCTTCTTCAA 37027 ||||||| || ||||||||||| | ||||| ||||| || || | || ||||| |||| Sbjct 11455 CTTCTTCCACCTTTTCAAATTCTCTGGCACGTGCATTAATACGCTTAATCTCTTCCTCAA 11514 Query 37028 AAGAACAGTTTAAAACAACCATTAAATCTGGTGTTTTCTTAGGAAGTGGTTCTAACTCCT 37087 |||||||||||||||| | ||| | ||||| | ||||||||||| || |||||||| | Sbjct 11515 AAGAACAGTTTAAAACTATCATCATGTCTGGAGACTTCTTAGGAAGGGGCTCTAACTCTT 11574 Query 37088 TAAGCATTCTCTCTAGTAA-ACGATGGTAGACACCTTGTTCCATTTCGTTCACATGTCCT 37146 ||||||| | | || || || ||||| | ||| |||| | | ||| ||| Sbjct 11575 TAAGCATGC-GTGAAGCAAGGCGGTGGTACGCCTCTTTCTCCACCTTAGTGACAGCACCT 11633 Query 37147 TCTTGTACTAATTGGTCTAAGAAGATACTATCTTCAAATATAGACCGGTCTAAAATACCG 37206 || | | |||||| | ||||||| ||| ||| | || || |||||||| || ||| Sbjct 11634 TCATCATAGAGTTGGTCAAGGAAGATAGCATCCTCATAAATGGAGCGGTCTAAGATGCCG 11693 Query 37207 TTATCCACACTCATTGCTTCTTGAATCATTTCAAAGCGTTTGGATAACATATCTATTTGA 37266 | | |||||||| || |||||||| | ||| || || | ||| ||||||||| Sbjct 11694 TGCTTAACACTCATAGCCTCTTGAATAAGTTCGAAACGGCGACTCAGCATGTCTATTTGA 11753 Query 37267 AAAAGTAGTCCGTATTTTGATTTGTCTTGGTAAAACAATTCAAGCATTGGATTCTCTTCT 37326 || | | ||| || ||| ||||| || || || | || | || || | ||| Sbjct 11754 AAGACGAATCCATACTTTTCCTTGTCCTGATAGAAAAGCTCTAACAACTCGTTGTTTTCA 11813 Query 37327 ACAGGTTCATAAACTGCTTTTGTATCTAATAGGTTTGCTAATATTTCTGTCATTGATGAT 37386 | ||| ||||| || || ||||| |||||| | |||||| | |||||||||| || Sbjct 11814 ATAGGCTCATACACCGCCTTTGTGTCTAATGCCTCTGCTAAAAGGGCTGTCATTGAAGAC 11873 Query 37387 TTACCTACACCAATAACTCCGGCTAACGTAATTATCATAACCAACTCCT 37435 || || ||||| ||||| || || ||||| | ||||||| ||| |||| Sbjct 11874 TTGCCCACACCGATAACACCTGCCAACGTTAAAATCATAATCAAATCCT 11922 >seq7224 Length=121733 Score = 250 bits (276), Expect = 2e-61 Identities = 188/221 (85%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 62612 AACTCAGCAAAAGAATGGATTGCACAAAAAGAATCTAGCGGTTCTTACTCAGCAACTAAC 62671 ||||| || |||||||||||||||||||||||||| | ||||||||| | ||||| ||| Sbjct 7210 AACTCTGCGAAAGAATGGATTGCACAAAAAGAATCAGGTGGTTCTTACACTGCAACAAAC 7269 Query 62672 GGACGTTACATTGGACGTTACCAATTAGATGCTTCATACTTAAACGGTGACTACTCACCA 62731 || |||||||| |||||||||||||||||| | |||| || |||||||||||||||||| Sbjct 7270 GGCCGTTACATCGGACGTTACCAATTAGATTCAGCATATTTGAACGGTGACTACTCACCA 7329 Query 62732 GAAAACCAAGAACGTGTAGCAGATGCTTATGTTGCAGGACGTTATGGTTCATGGGAAAAC 62791 | |||||||||||||| | ||| | || ||||| ||||| |||||||||||||| Sbjct 7330 GCGAACCAAGAACGTGTTGTAGAAGAATACGTTGCTGGACGCTATGGTTCATGGGATGCT 7389 Query 62792 GCACAAGCTTTCTGGTTAGCTAACGGTTGGTACTAAAATAA 62832 ||| |||| ||||||||||| ||||||||||||||| |||| Sbjct 7390 GCAAAAGCATTCTGGTTAGCAAACGGTTGGTACTAAGATAA 7430 >seq10807 Length=55079 Score = 215 bits (238), Expect = 5e-51 Identities = 175/212 (83%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 62618 GCAAAAGAATGGATTGCACAAAAAGAATCTAGCGGTTCTTACTCAGCAACTAACGGACGT 62677 || ||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| Sbjct 461 GCCAAAGAATGGATCGCACAAAAAGAATCTAGCGGTTCTTATACAGCAACAAACGGACGT 520 Query 62678 TACATTGGACGTTACCAATTAGATGCTTCATACTTAAACGGTGACTACTCACCAGAAAAC 62737 || || || |||||||||||||| |||| ||||| |||||||||||||| | | || Sbjct 521 TATATCGGCCGTTACCAATTAGACTCTTCTTACTTGAACGGTGACTACTCTGCTGCCAAT 580 Query 62738 CAAGAACGTGTAGCAGATGCTTATGTTGCAGGACGTTATGGTTCATGGGAAAACGCACAA 62797 |||||| | || ||||| |||||||| |||||||| || ||||| || || Sbjct 581 CAAGAAAGAGTGGCAGAACAATATGTTGCTTCTCGTTATGGCTCTTGGGATGCAGCCAAA 640 Query 62798 GCTTTCTGGTTAGCTAACGGTTGGTACTAAAA 62829 |||||||||||||||||||||||||||||||| Sbjct 641 GCTTTCTGGTTAGCTAACGGTTGGTACTAAAA 672 >seq7607 Length=81728 Score = 98.7 bits (108), Expect = 9e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 22698 CCATTACCTTGTACATTTGTTCCTCTATACTTAATAGCACAGTCAGCGTGCTGTAGTCTC 22757 ||||| ||||| || || || |||| |||||| ||||| || || |||||||| | ||| Sbjct 73873 CCATTCCCTTGAACTTTAGTGCCTCGATACTTTATAGCGCAATCTGCGTGCTGGATCCTC 73932 Query 22758 CAATAACCATTCTTTCTTTCGAAATGTCCTTGACCTTTCTCTACAAAGGTACCGCACCTG 22817 ||||| || || || || ||||||||||||| ||| || || ||| || || | Sbjct 73933 CAATATCCGTTTTTCCTCTCGAAATGTCCTTTACCACGATCAACGAAGCCTCCACATCGA 73992 Query 22818 TAGCAATAACCCGGATACTTGTTGCGCAT 22846 |||||||| || ||||| || || | ||| Sbjct 73993 TAGCAATAGCCTGGATATTTATTTCTCAT 74021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471211990635360