Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq1361 118 1e-21 >seq1361 Length=62553 Score = 118 bits (130), Expect = 1e-21 Identities = 422/647 (65%), Gaps = 36/647 (6%) Strand=Plus/Minus Query 141622 ATATCTGGGTACATACGTTTCGAAGCGCATTCCAGAGCCAATTGTTTGATGTCATAGTTA 141681 |||||||||||||| | ||| | || ||||| | || |||||||||||||||||||| Sbjct 32808 ATATCTGGGTACATTCTTTTTGTGGCACATTCTAAGGCTAATTGTTTGATGTCATAGTTT 32749 Query 141682 CGATCCCCAGGATTCA---TGTTTACACCTTTTTCCATAAACATGACCAGTTTAGGGAAC 141738 |||| || || | || || | ||||| |||| || || ||| ||||| Sbjct 32748 GGATCAGTTGGTTTAAGATTGATTCCGTCTTTTAGTGTAAATAT---CAATTTTGGGAAG 32692 Query 141739 ACAGGGGTAATACCTTGTTTAC---CCAGACCACGAATACGGTTTTTCAGAATCGCTTTC 141795 | | || | || | || | | ||| || ||| ||| | ||||||||| Sbjct 32691 ATCGCTGTC---CGTTTCTCACTGCCTAATCCATTGATTCGGATTTGTAAAATCGCTTTT 32635 Query 141796 TGGATCATTCGTTCAAAC--ATTCCCGTACCAGTACCGAA----AGTAATAGTAACGAAA 141849 ||||| |||||||||| ||| |||| |||||| ||| | ||||| || Sbjct 32634 TGGATTTCTCGTTCAAACCAATTTT--TACCTAGACCGAAGCCGAGTGA-AGTAA---AA 32581 Query 141850 GGTGTTTGTCCGTTGGCAGTATGCAGCGTGTTAACTTCGTATTCATACGATTGGAAAGCA 141909 || ||||||||||||| ||| || || || | || ||||| | ||| | ||| Sbjct 32580 GGCGTTTGTCCGTTGGAAGTGAAAAGTGTATTGATCTCATATTCCAAACTTTGCATGGCA 32521 Query 141910 TCAAACACATCTTTTTCAGTCTTTTCCATCGCATATG-TACGATCCAA-CGAAATTTT-- 141965 ||||| | |||||||| || ||| | | ||||| | | | || || | | Sbjct 32520 TCAAAAATATCTTTTTTGGTTTTTGCTTTTGCATAGGCTTCTTGCCGTTCGGGTGTGTCG 32461 Query 141966 ATACTTT--TTAGCATCCTTAACATGCTTTTCATATGTCATTTCTGCATACGGAGCCAGC 142023 || | || || ||||| | | ||| |||| || | | || |||| | ||||| ||| Sbjct 32460 ATCCATTCTTTGGCATCAATTAAATGTTTTTTGTAATTTAATTGTGCAAAAGGAGCAAGC 32401 Query 142024 ACTTTATCAACG---TTTGCAAAGGTTGTCCCGCCGTACTGGTGAGAAGCAATCTGTGCG 142080 | || ||| | | ||| | | ||||| || ||| ||| |||| | || Sbjct 32400 AATTCATCTGTGCGATCGGCAGAACAT---CCGCCATATTGGCTAGATGCAACATTGGCA 32344 Query 142081 GTGATCTGTGCCATAAGAGCAGTCGCAACACCGATTGATTTCGGGGGTTCGATGTCTGCG 142140 ||||||||| || | || || || ||| ||||| || | ||||| ||||| Sbjct 32343 ATGATCTGTGAAATCTGTGCCGTTGCTGTTTGGATCGATTTTGGTGATTCGACTTCTGCA 32284 Query 142141 TTACCCATCTTGAAGCCATTAGCCAGCATACCTTTCAAATCCACCAGACAGCAGTTTGTG 142200 || || || || || || || || ||||||||| || || | || |||||| ||||| Sbjct 32283 TTTCCAATTTTAAACCCGTTGTTCAACATACCTTTGAAGTCGATCAAACAGCAATTTGTC 32224 Query 142201 TATGGCGTGAACGGGCTGTAATCCAGATCATGATAGTGGATGTCGCC 142247 ||| || |||| |||||| ||||||||||| ||||| ||||| Sbjct 32223 ATTGGTGTATACGGATGGTAATCGAGATCATGATAATGGATATCGCC 32177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567336055902720