Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_029022.1
Length=46895
Score E
Sequences producing significant alignments: (Bits) Value
seq7607 199 1e-46
seq2007 80.6 8e-11
>seq7607
Length=81728
Score = 199 bits (220), Expect = 1e-46
Identities = 432/636 (68%), Gaps = 14/636 (2%)
Strand=Plus/Minus
Query 17717 TTTGTTGAATGGGTTCTTGGTAAAAATCAAAATGAAAAGATTATGACAGGGTCGTATAAT 17776
||||| |||||| | | || || |||| | | || |||||||| || || |||||
Sbjct 69480 TTTGTCGAATGGATATTAGGGAATGATCATAGCAAGAAAATTATGACTGGATCATATAAC 69421
Query 17777 GAAACTCTATCAACTATGTTTTCTAAGAATGTAAGGAATTCTATTCAAGAAGAAAAAGCA 17836
|| || ||||| || | ||||| |||||||| || || | || ||||||| ||||||
Sbjct 69420 GAGACACTATCGACCGTATTTTCCAAGAATGTGAGAAACACAATCCAAGAAGTAAAAGCC 69361
Query 17837 GATAAGTACAAACCAGTATTTTCTGATGTATTTCCAGGAGTAGCAATTAAACATGGTGAT 17896
||||| | | ||| | || ||| | ||| | | | || || ||| ||||||||
Sbjct 69360 GATAAAGATATGATAGTCTACTCCGATATTTTTG-ATGCGAAG--ATAAAATATGGTGAT 69304
Query 17897 GGAGCCATGAACTTATGGTCCTTAGAAGGTGGATATAATAACTATTTAGCTACTTCTCCT 17956
||||| ||||| | ||| || |||| ||| ||||||||||| | || || || ||
Sbjct 69303 GGAGCTATGAATCTTTGGAGTTTGGAAGATGGCTATAATAACTACCTGGCCACATCGCCA 69244
Query 17957 ACTGGTACTGCAACAGGGTTTGGTTGTTCATTAATGATTATAGACGATTTAATTAAAAAT 18016
|||||||| || || || |||||| |||| || || || || |||| || ||
Sbjct 69243 ACTGGTACAGCTACTGGTTTTGGTGCAGACATAATTATCATTGATGACGTAATCAAGAAC 69184
Query 18017 GCAGAAGAAGCTTATAACGAAAGTGTTAAGCAAAAACACTGGGAATGGGTTACCAATACT 18076
||||| ||||| | |||| ||| | | ||||| ||||||||| || ||||||
Sbjct 69183 GCAGATGAAGCAAACAACGCTGCAGTTTTGGATAAACATTGGGAATGGTTTGTAAATACT 69124
Query 18077 ATGCTTTCAAGACTTGA-AGAAGGTGGAAAAATAATAATTATAATGACTAGATGGGCTAG 18135
||||| || | ||||| || | || || || || || | |||||||||||| |||
Sbjct 69123 ATGCTATCCCGTCTTGAGAGCAAC-GGTAAGATCATTATCAACATGACTAGATGGCATAG 69065
Query 18136 TGATGATTTAGCAGGTAAAGCATTAGATTA--TTACAATGAACAAGGGATTAAGATTAGA 18193
||||||| ||||||| ||| ||| | | | || | | | ||| |||| |||
Sbjct 69064 CAATGATTTGGCAGGTAGAGCGTTAAAGGAATTGCCACTTAGC--GGGTATAAGGTTAAG 69007
Query 18194 CATATTTCTATGAAAGCATTGATTGATAAAGAGAAAAAACAAATGCTTTGCCCAGAGGTA 18253
|||||| | |||| | |||| || | || | | ||||||||| ||| ||
Sbjct 69006 CATATTAACTTTCAAGC---GTATGATGAAAAAAACGATCGGATGCTTTGCGAAGATGTT 68950
Query 18254 TTAAGCTAT-AGAAGTTATATAAATAAGGTAAAAGCTATGGGTGAGGATATAGCAAGTGC 18312
| ||| || | ||| | ||| | ||| | ||||||| ||| || || || ||
Sbjct 68949 CTTTCTTATGAGGA-TTACCTGCGTAAAGCTAAAACGATGGGTGCGGACATCGCTAGCGC 68891
Query 18313 TAACTATCAGCAGGAGCCTATTGACCTAAAAGGAAG 18348
||||| || || |||||||| ||| | ||||| ||
Sbjct 68890 CAACTACCAACAAGAGCCTATCGACATTAAAGGGAG 68855
Score = 102 bits (112), Expect = 2e-17
Identities = 92/116 (79%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 18770 TGGAGAGATAGATGGCAAGAGTATTATAAAGCTATGACAACTTATCAAAGAGAAGGTAAG 18829
|||||| |||| | || || ||||| || ||||| |||||||| | |||||| |||
Sbjct 68460 TGGAGAACAAGATTTCCTGATTACTATAAGGCGATGACTACTTATCAGAAAGAAGGAAAG 68401
Query 18830 AATAAACATGATGATGCTCCGGACGCAACAACTGGAATTGCCGAAAAAATAAATAC 18885
|| ||||||||||||||||| || |||||||| || || ||||||| ||| || ||
Sbjct 68400 AACAAACATGATGATGCTCCAGATGCAACAACAGGCATCGCCGAAACAATGAACAC 68345
>seq2007
Length=108395
Score = 80.6 bits (88), Expect = 8e-11
Identities = 64/77 (83%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 4813 CATGGAATGTATGCAAAAGATGAATTGCTAGATAATCCAGATTTATTAATACAAGTTGCT 4872
||||| || || |||| |||||||||||||| ||||||||||| | || |||| |||
Sbjct 103242 CATGGTATTTACGCAACGGATGAATTGCTAGACAATCCAGATTTGCTGATCGAAGTAGCT 103301
Query 4873 ACAAAGTTAAAAGAAGA 4889
||||| |||||||||||
Sbjct 103302 ACAAAATTAAAAGAAGA 103318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149657359872456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |