Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_029022.1 Length=46895 Score E Sequences producing significant alignments: (Bits) Value seq7607 199 1e-46 seq2007 80.6 8e-11 >seq7607 Length=81728 Score = 199 bits (220), Expect = 1e-46 Identities = 432/636 (68%), Gaps = 14/636 (2%) Strand=Plus/Minus Query 17717 TTTGTTGAATGGGTTCTTGGTAAAAATCAAAATGAAAAGATTATGACAGGGTCGTATAAT 17776 ||||| |||||| | | || || |||| | | || |||||||| || || ||||| Sbjct 69480 TTTGTCGAATGGATATTAGGGAATGATCATAGCAAGAAAATTATGACTGGATCATATAAC 69421 Query 17777 GAAACTCTATCAACTATGTTTTCTAAGAATGTAAGGAATTCTATTCAAGAAGAAAAAGCA 17836 || || ||||| || | ||||| |||||||| || || | || ||||||| |||||| Sbjct 69420 GAGACACTATCGACCGTATTTTCCAAGAATGTGAGAAACACAATCCAAGAAGTAAAAGCC 69361 Query 17837 GATAAGTACAAACCAGTATTTTCTGATGTATTTCCAGGAGTAGCAATTAAACATGGTGAT 17896 ||||| | | ||| | || ||| | ||| | | | || || ||| |||||||| Sbjct 69360 GATAAAGATATGATAGTCTACTCCGATATTTTTG-ATGCGAAG--ATAAAATATGGTGAT 69304 Query 17897 GGAGCCATGAACTTATGGTCCTTAGAAGGTGGATATAATAACTATTTAGCTACTTCTCCT 17956 ||||| ||||| | ||| || |||| ||| ||||||||||| | || || || || Sbjct 69303 GGAGCTATGAATCTTTGGAGTTTGGAAGATGGCTATAATAACTACCTGGCCACATCGCCA 69244 Query 17957 ACTGGTACTGCAACAGGGTTTGGTTGTTCATTAATGATTATAGACGATTTAATTAAAAAT 18016 |||||||| || || || |||||| |||| || || || || |||| || || Sbjct 69243 ACTGGTACAGCTACTGGTTTTGGTGCAGACATAATTATCATTGATGACGTAATCAAGAAC 69184 Query 18017 GCAGAAGAAGCTTATAACGAAAGTGTTAAGCAAAAACACTGGGAATGGGTTACCAATACT 18076 ||||| ||||| | |||| ||| | | ||||| ||||||||| || |||||| Sbjct 69183 GCAGATGAAGCAAACAACGCTGCAGTTTTGGATAAACATTGGGAATGGTTTGTAAATACT 69124 Query 18077 ATGCTTTCAAGACTTGA-AGAAGGTGGAAAAATAATAATTATAATGACTAGATGGGCTAG 18135 ||||| || | ||||| || | || || || || || | |||||||||||| ||| Sbjct 69123 ATGCTATCCCGTCTTGAGAGCAAC-GGTAAGATCATTATCAACATGACTAGATGGCATAG 69065 Query 18136 TGATGATTTAGCAGGTAAAGCATTAGATTA--TTACAATGAACAAGGGATTAAGATTAGA 18193 ||||||| ||||||| ||| ||| | | | || | | | ||| |||| ||| Sbjct 69064 CAATGATTTGGCAGGTAGAGCGTTAAAGGAATTGCCACTTAGC--GGGTATAAGGTTAAG 69007 Query 18194 CATATTTCTATGAAAGCATTGATTGATAAAGAGAAAAAACAAATGCTTTGCCCAGAGGTA 18253 |||||| | |||| | |||| || | || | | ||||||||| ||| || Sbjct 69006 CATATTAACTTTCAAGC---GTATGATGAAAAAAACGATCGGATGCTTTGCGAAGATGTT 68950 Query 18254 TTAAGCTAT-AGAAGTTATATAAATAAGGTAAAAGCTATGGGTGAGGATATAGCAAGTGC 18312 | ||| || | ||| | ||| | ||| | ||||||| ||| || || || || Sbjct 68949 CTTTCTTATGAGGA-TTACCTGCGTAAAGCTAAAACGATGGGTGCGGACATCGCTAGCGC 68891 Query 18313 TAACTATCAGCAGGAGCCTATTGACCTAAAAGGAAG 18348 ||||| || || |||||||| ||| | ||||| || Sbjct 68890 CAACTACCAACAAGAGCCTATCGACATTAAAGGGAG 68855 Score = 102 bits (112), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 18770 TGGAGAGATAGATGGCAAGAGTATTATAAAGCTATGACAACTTATCAAAGAGAAGGTAAG 18829 |||||| |||| | || || ||||| || ||||| |||||||| | |||||| ||| Sbjct 68460 TGGAGAACAAGATTTCCTGATTACTATAAGGCGATGACTACTTATCAGAAAGAAGGAAAG 68401 Query 18830 AATAAACATGATGATGCTCCGGACGCAACAACTGGAATTGCCGAAAAAATAAATAC 18885 || ||||||||||||||||| || |||||||| || || ||||||| ||| || || Sbjct 68400 AACAAACATGATGATGCTCCAGATGCAACAACAGGCATCGCCGAAACAATGAACAC 68345 >seq2007 Length=108395 Score = 80.6 bits (88), Expect = 8e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 4813 CATGGAATGTATGCAAAAGATGAATTGCTAGATAATCCAGATTTATTAATACAAGTTGCT 4872 ||||| || || |||| |||||||||||||| ||||||||||| | || |||| ||| Sbjct 103242 CATGGTATTTACGCAACGGATGAATTGCTAGACAATCCAGATTTGCTGATCGAAGTAGCT 103301 Query 4873 ACAAAGTTAAAAGAAGA 4889 ||||| ||||||||||| Sbjct 103302 ACAAAATTAAAAGAAGA 103318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149657359872456