Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_029025.1 Length=41843 Score E Sequences producing significant alignments: (Bits) Value seq1616 127 5e-25 >seq1616 Length=186323 Score = 127 bits (140), Expect = 5e-25 Identities = 272/400 (68%), Gaps = 6/400 (2%) Strand=Plus/Minus Query 923 CTCTACTCATTCTTATTCGATAGAGAACCAGCAGAAGGTAGACAAATATTTTGTGCTGCA 982 || ||| ||| ||||| | || | | || ||| | |||| |||||||||||| |||| Sbjct 184593 CTGTACGAATTTTTATTTGCTAAAAATCCCGCATTAAGTAGGCAAATATTTTGTACTGCT 184534 Query 983 AACGACAAGAAACAAGCTAGTATTGTATTCAATATGGTAGCTAAACAACTA-ATGTACTT 1041 || || || |||||||| ||||||| ||| | |||| | || ||| || ||| || Sbjct 184533 AATGATAAAAAACAAGCGAGTATTGCATTTGACATGGCAAGGAAGCAATTAGATGCT-TT 184475 Query 1042 CATCTCTCAAGTGCCTGAACTaaaaaaaGACGTTAAAAAGGTTAGAGAACTACTTCAACA 1101 | ||| || ||||| | | ||||| |||| ||| |||| | ||| || | Sbjct 184474 AAGATCTAAATATCCTGATATTAGAAAAGCAACTAAACGTGTTCGAGAGTTTCTTAAAAA 184415 Query 1102 TACAAAAGATGGCTCATACGTTATGCCTCTCTCTCGTGATACAGGGGCAGTTGACGGTTT 1161 | || ||||| |||||| ||| ||| ||| || ||||| ||| |||| || || Sbjct 184414 TCTAAGAGATGAATCATACATTACTGTTCTTTCTAAAGAAACAGGTGCAATTGATGGATT 184355 Query 1162 TGAGCCATTTTTAGCTGTTATAGATGAATATCATGCTGCAAAAACAAACGAAATGTTAGA 1221 |||||| | | | | || | ||||| ||| || |||||||| | |||||| | || Sbjct 184354 TGAGCCTTATATTGGAGTGTTTGATGAGTATGGAGCATCAAAAACAGATGAAATGATGGA 184295 Query 1222 ACTTATCCAATCAGGTCAA-GTTAACTTGATGCAAAGC-TTAATCTTTATCATCTCAACG 1279 | | || ||||||||||| | || | ||| || | ||||| || || || || || Sbjct 184294 ATTGATTGAATCAGGTCAAGGACAATTAGAT--AATCCGTTAATTTTAATTATTTCTACC 184237 Query 1280 GCAGGATTTAATCTAAACGCTCCAATGTATATGGATGAAT 1319 || |||||| |||| | || ||||||| | ||||| Sbjct 184236 GCCAATTTTAATTTAAATGTCCCCATGTATAGAGTTGAAT 184197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133521692158440