Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_029044.1 Length=154434 Score E Sequences producing significant alignments: (Bits) Value seq123604 86.0 6e-12 seq64495 84.2 2e-11 seq8033 82.4 8e-11 >seq123604 Length=1138 Score = 86.0 bits (94), Expect = 6e-12 Identities = 69/81 (85%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 90718 CACCA-CGGGGTGTAGTTCAG--TGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGG 90774 ||||| |||| ||| | |||| ||| |||||||| ||||||||||| ||| |||||||| Sbjct 780 CACCATCGGGATGTGGCTCAGCTTGGTAGAGCGCTCGGTTTGGGACCGAGAGGTCGCAGG 721 Query 90775 TTCGAATCCTGTCACCCCGAC 90795 ||||||||||||| |||||| Sbjct 720 TTCGAATCCTGTCTTCCCGAC 700 >seq64495 Length=424 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/75 (85%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 90722 ACGGGGTGTAGTTCAG--TGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGA 90779 ||||| |||| |||| ||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 30 ACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGA 89 Query 90780 ATCCTGTCACCCCGA 90794 |||||||| ||||| Sbjct 90 ATCCTGTCTTCCCGA 104 >seq8033 Length=24764 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/74 (85%), Gaps = 2/74 (3%) Strand=Plus/Plus Query 90723 CGGGGTGTAGTTCAG--TGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 90780 |||| |||| |||| ||| ||||| ||||||||||||||||| |||||||||||||| Sbjct 40 CGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAA 99 Query 90781 TCCTGTCACCCCGA 90794 ||||||| ||||| Sbjct 100 TCCTGTCTTCCCGA 113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493072159636160