Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_029058.1 Length=106071 Score E Sequences producing significant alignments: (Bits) Value seq12725 129 4e-25 seq7224 84.2 1e-11 >seq12725 Length=465 Score = 129 bits (142), Expect = 4e-25 Identities = 88/98 (90%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 30468 TGCAACGGAGAATGAGGGATTTGAACCCTCGCACCGGTTTCCCGGCCTACACCCTTAGCA 30527 || ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 113 TGAAACGGAGAAGGAGGGATTTGAACCCTCGCGCCGGTTTCCCGACCTACACCCTTAGCA 172 Query 30528 GGGGCGCCCCTTCAACCAACTTGGGTAATTCTCCAAAA 30565 |||||||| ||||| || ||||| ||| ||| |||||| Sbjct 173 GGGGCGCCTCTTCAGCC-ACTTGAGTACTTCCCCAAAA 209 >seq7224 Length=121733 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34815 GCTAAGGAATGGATTGCCCAGCATGAATCCAGCGGCTCCTACACTGCCCAGAACGGTCAA 34874 || || ||||||||||| || | ||||| | || || |||||||| ||||| | Sbjct 7216 GCGAAAGAATGGATTGCACAAAAAGAATCAGGTGGTTCTTACACTGCAACAAACGGCCGT 7275 Query 34875 TACGTTGGTCGCTACCAACTT--TCCAGCTCTTACCTAAATGGTGACTATTCGCCAGCAA 34932 ||| | || || |||||| | | |||| || | || |||||||| || ||||| | Sbjct 7276 TACATCGGACGTTACCAATTAGATTCAGCA--TATTTGAACGGTGACTACTCACCAGCGA 7333 Query 34933 ACCAAGAACAAGTAGCTGACCAGTATGTCGCTTCACGCTATGGTTCGTGGAGTGCCGCTA 34992 ||||||||| || | || | || || ||| |||||||||||| ||| ||| || | Sbjct 7334 ACCAAGAACGTGTTGTAGAAGAATACGTTGCTGGACGCTATGGTTCATGGGATGCTGCAA 7393 Query 34993 AGAACTTCTGGTTA 35006 | ||||||||| Sbjct 7394 AAGCATTCTGGTTA 7407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338640412959168