Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_029069.1 Length=165031 Score E Sequences producing significant alignments: (Bits) Value seq1539 104 2e-17 >seq1539 Length=57711 Score = 104 bits (114), Expect = 2e-17 Identities = 181/260 (70%), Gaps = 5/260 (2%) Strand=Plus/Minus Query 40250 ACATATCAAAATAGAAAAGGAGTTTTTAAAAATGTTAAATAGAGTCGTTTTAGTTGGAAG 40309 ||| || || | ||||| |||| | ||||||| | |||| || |||||| ||| | Sbjct 16203 ACAGATGAACAGAGAAATGGAGAGAT-AAAAATGATCAATAATGTAACTTTAGTAGGACG 16145 Query 40310 ATTAACAAAAGAGGTTGAATTACGTTATACCCAATCTGGACAAGCTGTAGCCACGTTTAC 40369 ||||| ||||| || |||||||||||| | ||| ||| || ||||| ||||| Sbjct 16144 GTTAACCAAAGATCCCGATTTACGTTATACCGCAAGTGGCACAGCAGTGGCCACTTTTAC 16085 Query 40370 ATTAGCAGTAAACAGAACATTTACAAACCAGCAGGGAGAACGTGAAGCAGATTTCATAAA 40429 ||||| || || | | ||||| || || | || | || ||||| ||||| || || Sbjct 16084 CTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGAGAAGCTGATTTTATCAA 16025 Query 40430 TTGTGTGGTATGGAGAAAACAAGCCGAGA--ATGCAGCAAACTTTCTTAAAAAGGGCAGT 40487 ||||||| | ||| | |||| ||| || | ||| || | || ||||||||| ||| Sbjct 16024 TTGTGTGATTTGGCGTAAACCAGCGGAAACGATG--GCTACATTAGCTAAAAAGGGTAGT 15967 Query 40488 TTAGCCGGTGTAGATGGACG 40507 ||| ||| || | ||||| Sbjct 15966 TTAATCGGCGTCGTCGGACG 15947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526914703230240